KEGG   Dromaius novaehollandiae (emu): 112988651
Entry
112988651         CDS       T07572                                 
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112988651 (PATL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dne03019]
    112988651 (PATL1)
Messenger RNA biogenesis [BR:dne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112988651 (PATL1)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     112988651 (PATL1)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 112988651
NCBI-ProteinID: XP_025965065
Ensembl: ENSDNVG00000017379
LinkDB
Position
Unknown
AA seq 769 aa
MLIPFSPQSLEDCPLDEDEDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELE
DKPTAAREQDGPGSDDTDLLGDHEDTLAERLTRLVIDSELEDPAIMQAVQTRTPAQQPAG
LNSSIWDGSAVLRRIRGPLLTQEMPSVSVLDYALPQRAPQAREEERDPSERALPRRSSSP
VIGSPPVRAVPIGTPPKQAAVPNFNQQILCPKPVHIRATMQQRYPAPYGERMSPNQLCNV
PNSSLLGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQ
GRVGQMMSPASGFRAFFGAPPAPPPSQPQHPSGPGSHLQSLRPQPQMFRPDTTHLHPQHR
RLLHQRQQQNRSQHRSLNGSVGDRGGHRSSHQEQMRKDPYANLMLQREKDWVSKIQMMQL
QSTDPYLDDYYYQNYFQKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHTYKPVQFEGS
LGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYER
RYLLSLEGERXALMGERKQKICDMYDNLRGKAPGQERPSDDHFMQIMCIRKGKRLVARIL
PFLSPEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTN
LPQSATAPAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDTNTELMQDNQWTELMLMA
TRELLRIPQVALAKPVSTPSNLISLFSRYVDQQKLNLLETKLHLVHGIR
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgctcatcccmttctctccccagtccctggaggactgcccgctggatgaggacgaagac
gccttccaggccctaggtgaggaagatgaagatatcgaccagttcaatgacgacacgttt
ggagctggggctgttgatgacgactggcaggaggcgcacgagcggctggcagagctggaa
gacaagcccacggcagccagggagcaggatggaccaggcagtgatgacacggatctgctg
ggcgaccacgaggacaccctggcagagaggctgaccaggctggtcattgacagcgagctg
gaggaccctgccatcatgcaggcggtgcaaaccaggacccctgcccagcagccggcaggg
ctgaactccagcatctgggatggctcggctgtcctgcggcgtatccgagggccacttctc
actcaggagatgccttcggtgtctgtgctggactacgctctgcctcagagagccccacag
gcccgggaggaagagcgggacccctcagagcgggcactgccccgacgttcatcatccccg
gtcatcgggagcccyccagtccgggccgtccccattggcactcctcccaagcaggctgct
gtgcccaacttcaaccagcagattctttgtccgaagcccgttcacatccgggccaccatg
cagcagcgttaccctgctccctacggcgagaggatgtcccccaatcagctctgcaacgta
ccgaattcctccctcctgggccacccattcccccacagcgtctctcccgtcctcacccac
ctgcagagagcacagctgcttggaggagcccaggctggccgcatgtctcccagccagttt
gcccgggtctccggcctcgttgggagccccctcccctctgtgaatcccaagctgctccag
ggcagagttgggcagatgatgtctccggccagcgggtttcgtgccttctttggggctccc
cctgctccacctccatcccagccgcagcacccatcaggccccggatcccacctgcagagc
ctgaggccgcagccgcagatgttccggccggacacgacccaccttcacccccagcaccgc
cgcctcctgcaccagcggcaacagcagaaccggagccagcaccggagcctcaacggctca
gtgggggaccgagggggccaccggagcagccaccaggagcagatgcgcaaagacccctac
gccaacctcatgctgcaacgggagaaggactgggtgtccaagatccagatgatgcagctg
cagagcactgatccctacctggatgactattactaccagaattacttccagaagctggag
aagttgtcagcagctgaggaagtccagggtgatggtcccaaaaaggaacgcactaaactc
atcacgcctcaggtggcaaagcttgagcacacctacaagccagtgcagtttgagggctca
ctagggaagctcacggtctccagcgttaataacccccggaagatgatagatgcagtcgtg
acctcccgcagcgaggatgatgagacaaaggagaagcaggttcgagacaagaggcgccag
acccttgttacaattgagaagacgtacagcctcctcctggacgtggaagactatgagaga
cgctacctcctgagtctggaaggcgagcggcmagccctcatgggcgagaggaagcagaag
atatgtgacatgtatgacaatctgagggggaaggcacccgggcaggagaggccaagcgat
gaccatttcatgcagatcatgtgcatccggaagggaaaacgcctcgtggcccggatcctc
cccttcttgtcaccagagcaagcagccgatgtactcatggcgacrgccaggaacctgccc
ttcctcatcaagaaggatgctcaggacgaggtgctgccctgcctgttgaggcccttctcg
cacgttctctatcaccttcccttggggacggtcaccagccttgtgcagcagctaacaaac
ctacctcagagcgcgactgcgccagcacccaccaacctgcacctcactgctgtgctccaa
aacaagttcggcctgtccctgctgtacttggtcctgagccgtggagaggaactgcagagc
tcagacacgaacacggagctaatgcaggacaaccagtggacggagctgatgctcatggca
acccgggagctgctgcggatcccccaggtggccttggcgaagccggtgtccaccccctcg
aacctgatctccctcttctctcgctatgttgaccagcagaagctgaacttgctggagaca
aaattgcacttagtgcacgggatccggtag

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