Dromaius novaehollandiae (emu): 112988651
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Entry
112988651 CDS
T07572
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112988651 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dne03019
]
112988651 (PATL1)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112988651 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
112988651 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
112988651
NCBI-ProteinID:
XP_025965065
Ensembl:
ENSDNVG00000017379
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MLIPFSPQSLEDCPLDEDEDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELE
DKPTAAREQDGPGSDDTDLLGDHEDTLAERLTRLVIDSELEDPAIMQAVQTRTPAQQPAG
LNSSIWDGSAVLRRIRGPLLTQEMPSVSVLDYALPQRAPQAREEERDPSERALPRRSSSP
VIGSPPVRAVPIGTPPKQAAVPNFNQQILCPKPVHIRATMQQRYPAPYGERMSPNQLCNV
PNSSLLGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQ
GRVGQMMSPASGFRAFFGAPPAPPPSQPQHPSGPGSHLQSLRPQPQMFRPDTTHLHPQHR
RLLHQRQQQNRSQHRSLNGSVGDRGGHRSSHQEQMRKDPYANLMLQREKDWVSKIQMMQL
QSTDPYLDDYYYQNYFQKLEKLSAAEEVQGDGPKKERTKLITPQVAKLEHTYKPVQFEGS
LGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYER
RYLLSLEGERXALMGERKQKICDMYDNLRGKAPGQERPSDDHFMQIMCIRKGKRLVARIL
PFLSPEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTN
LPQSATAPAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDTNTELMQDNQWTELMLMA
TRELLRIPQVALAKPVSTPSNLISLFSRYVDQQKLNLLETKLHLVHGIR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcccmttctctccccagtccctggaggactgcccgctggatgaggacgaagac
gccttccaggccctaggtgaggaagatgaagatatcgaccagttcaatgacgacacgttt
ggagctggggctgttgatgacgactggcaggaggcgcacgagcggctggcagagctggaa
gacaagcccacggcagccagggagcaggatggaccaggcagtgatgacacggatctgctg
ggcgaccacgaggacaccctggcagagaggctgaccaggctggtcattgacagcgagctg
gaggaccctgccatcatgcaggcggtgcaaaccaggacccctgcccagcagccggcaggg
ctgaactccagcatctgggatggctcggctgtcctgcggcgtatccgagggccacttctc
actcaggagatgccttcggtgtctgtgctggactacgctctgcctcagagagccccacag
gcccgggaggaagagcgggacccctcagagcgggcactgccccgacgttcatcatccccg
gtcatcgggagcccyccagtccgggccgtccccattggcactcctcccaagcaggctgct
gtgcccaacttcaaccagcagattctttgtccgaagcccgttcacatccgggccaccatg
cagcagcgttaccctgctccctacggcgagaggatgtcccccaatcagctctgcaacgta
ccgaattcctccctcctgggccacccattcccccacagcgtctctcccgtcctcacccac
ctgcagagagcacagctgcttggaggagcccaggctggccgcatgtctcccagccagttt
gcccgggtctccggcctcgttgggagccccctcccctctgtgaatcccaagctgctccag
ggcagagttgggcagatgatgtctccggccagcgggtttcgtgccttctttggggctccc
cctgctccacctccatcccagccgcagcacccatcaggccccggatcccacctgcagagc
ctgaggccgcagccgcagatgttccggccggacacgacccaccttcacccccagcaccgc
cgcctcctgcaccagcggcaacagcagaaccggagccagcaccggagcctcaacggctca
gtgggggaccgagggggccaccggagcagccaccaggagcagatgcgcaaagacccctac
gccaacctcatgctgcaacgggagaaggactgggtgtccaagatccagatgatgcagctg
cagagcactgatccctacctggatgactattactaccagaattacttccagaagctggag
aagttgtcagcagctgaggaagtccagggtgatggtcccaaaaaggaacgcactaaactc
atcacgcctcaggtggcaaagcttgagcacacctacaagccagtgcagtttgagggctca
ctagggaagctcacggtctccagcgttaataacccccggaagatgatagatgcagtcgtg
acctcccgcagcgaggatgatgagacaaaggagaagcaggttcgagacaagaggcgccag
acccttgttacaattgagaagacgtacagcctcctcctggacgtggaagactatgagaga
cgctacctcctgagtctggaaggcgagcggcmagccctcatgggcgagaggaagcagaag
atatgtgacatgtatgacaatctgagggggaaggcacccgggcaggagaggccaagcgat
gaccatttcatgcagatcatgtgcatccggaagggaaaacgcctcgtggcccggatcctc
cccttcttgtcaccagagcaagcagccgatgtactcatggcgacrgccaggaacctgccc
ttcctcatcaagaaggatgctcaggacgaggtgctgccctgcctgttgaggcccttctcg
cacgttctctatcaccttcccttggggacggtcaccagccttgtgcagcagctaacaaac
ctacctcagagcgcgactgcgccagcacccaccaacctgcacctcactgctgtgctccaa
aacaagttcggcctgtccctgctgtacttggtcctgagccgtggagaggaactgcagagc
tcagacacgaacacggagctaatgcaggacaaccagtggacggagctgatgctcatggca
acccgggagctgctgcggatcccccaggtggccttggcgaagccggtgtccaccccctcg
aacctgatctccctcttctctcgctatgttgaccagcagaagctgaacttgctggagaca
aaattgcacttagtgcacgggatccggtag
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integrated database retrieval system