Dromaius novaehollandiae (emu): 112988887
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Entry
112988887 CDS
T07572
Name
(RefSeq) collagen alpha-3(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne04382
Cornified envelope formation
dne04510
Focal adhesion
dne04512
ECM-receptor interaction
dne04518
Integrin signaling
dne04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112988887
04518 Integrin signaling
112988887
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112988887
09142 Cell motility
04820 Cytoskeleton in muscle cells
112988887
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112988887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dne04147
]
112988887
00536 Glycosaminoglycan binding proteins [BR:
dne00536
]
112988887
Exosome [BR:
dne04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112988887
Glycosaminoglycan binding proteins [BR:
dne00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112988887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
112988887
NCBI-ProteinID:
XP_025965498
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MKGNKGEKGFPGXPGPPGLRGFPGPEGPPGPQGPQGSPGLMGLPGAKGIRGVPGIPGFSG
PPGLPGEPGTVGPPGRPGVPGCNGTKGDRGFPGPPGRRGAPGVAGIPGIKGEKGCPADDY
NEVYGVKGDPGLPGMPGLRGSQGIQGYPGETGPQGPPGVSGVPGRAGPPGPKGLMGMKVI
GNKGRKGDTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPVGFTGPVGDSQ
SEKGDRGEPGAQGKPGKEGAPGPPGLPGQKGEQGEPGLAGKQGAKGAKGNTGPAGACGRT
EYYDKVAGEKGDEGLPGPPGPKGQRGMPGPRGPPGDAGRPGVSRPGLRGPPGLPGLKGIK
GEKGQSGLHIVGPPGLPGITGRPGSAGLPGPPGEPGRITFRPGLPGLPGEPGYVGPPGPP
GDTGMKGDEACVCTDCSYIPGAPGLPGSPGPHGQDGIYGREGTPGPKGSPGSPGAPGFPG
PQGLPGFKGDQGRKGSKGDPGYVYPEGPKGEQGDPGTEGDKGRKGSSGFLGRPGSKGSKG
SKGEQGLAGSKGDRGLPGLPGNLGLAGEMGLPGPPGYGPQGTRGLKGSKGVSGPPGLPGE
TGLKGETSMITPLPGLPGPQGPAGLPGLPGVPGRVGARGQPGDSGHPGPTGDTGFPGLGF
PGNSGPKGDKGLAGGRGSPGCEGKIGDPGRAGNLGLPGGKGDPGMVIPGEPGRMGSPGGS
GIPGPKGDTGFPGLPGLPGHAGHDGDDGLRGDPGSPGIPGDPGLPGKPTECLIGLPGLPG
DEGATGPPGGRGLLGSKGKLGPPGLGIPGIFGNPGEPGLIGPQGNAGLPGPKGQSGRPGI
SGVPGPRGEPGVMGPLGVPGPPGAFGSPGNPGSRGSFGFPGLKGRKGFLGQKGEPGDKGF
PGPSETLVSTGNKGEQGSKGFQGRMGLRGEKGDAGVQGPPGLVGSEGIPGLPGVKGFMGL
PGIPGGQGFPGAPGNIGDMGIPGPKGQKGSPGFPGPSGDSGQVGSGGSPGDKGDPGYPVP
GPPGETGPKGDRGPPGGLGSKGEKGSQGQPGHTGVPGPDGIRGESGGAGIPGQVGLLGGI
GAKGLQGLPGQMGIRGPPGAVGDPGENGLVGERGNQGQDGMPGTPGDKGEPGVPGRGIPG
LRGIPGRKGIKGNMGLPGFPGPPGMKGCRGEQGPIGPPGLMGFPGFQGATGMAIPGQKGN
RGIAGADARPGAPGFPGPPGLPTPSMKGSKGVRGADGIPGPTGPKGNIGLPGPKGMEGQP
GFPGARGDPGLVGFPGVKGEKGNQGPPGPQGAEGPSGPKGQHGPPGDPGRVFSVPGNKGS
PGLPGRPAQVNQDCLVQKETGDFQDKEDHLD
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtaataagggtgaaaaaggcttccctggcwttcctggtccacctggtcttaga
ggctttcctggcccagaagggcctccagggccacaaggacctcagggttctccagggctt
atgggcttacctggagctaaaggtatacgaggagtcccaggaatacctggattttcaggc
cccccaggtcttccaggtgagccgggaactgttggtcctcctgggcgcccgggtgttcca
ggatgcaatggcacaaagggcgatcgaggttttccaggtcctccgggtagaagaggtgct
ccaggtgttgcaggtatccctggcatcaaaggagaaaaggggtgccctgcagatgactat
aatgaagtctatggtgtgaaaggtgaccctggattgccaggaatgcctggacttcggggt
tcccagggtattcaaggatatcctggggaaactggaccacagggccctccaggagtttca
ggagtgccagggagagcaggacctccaggacctaagggtctcatgggaatgaaagtaata
ggaaacaaaggaagaaagggtgacactggattaactggaccccctggaccaccgggaaca
gttattgtgacattaagtggaccagacaacatgacggacttgaaaggagagaaaggagaa
aaaggatcaagaggactcccagggccagtggggtttacagggccagttggtgattctcag
agtgaaaagggtgatcgaggagaacccggagcgcagggtaaacctggaaaagaaggtgcc
ccaggtcctcccggcttaccgggacaaaagggtgaacagggcgaaccagggttggctggc
aaacaaggagctaagggggcgaaaggaaacaccggtccagctggagcttgtggtcgaaca
gagtattatgataaagtggctggtgaaaaaggagatgaaggactccccggaccaccggga
ccaaaaggtcaacgtggcatgcctgggccaaggggtcctcctggggatgctggtagacca
ggtgtgtcaagacctggtctgagaggtcccccaggacttcctgggctgaaaggaataaaa
ggagagaaaggacaatctggcttgcacattgtaggccctccaggactacctgggattact
ggcagacctggttctgctgggttaccaggtccccctggagaaccaggtagaataacattt
agacctggcctaccaggacttcctggagagccagggtatgtgggacctccaggacctcca
ggagatactggcatgaaaggtgatgaagcttgcgtgtgtactgattgcagctatattcca
ggagcacctggtcttcctggttctcctgggccacatggccaagatggcatatatggtaga
gaaggaacaccaggtcccaaaggatctccaggttctccaggagcaccggggtttccaggg
cctcagggacttccaggttttaaaggagatcaaggacgtaaaggatcaaaaggtgatcca
ggatacgtgtatccagaagggccaaaaggtgagcaaggagatccagggactgagggagac
aaaggaagaaaaggttcaagtggatttctgggaagacctggctctaaaggctcaaagggt
tctaaaggtgaacagggattagctggttcaaaaggagacagaggactaccaggattgcct
ggtaatcttggtcttgctggagagatggggcttcctggaccgccaggatatggaccacaa
ggaacaagaggtctcaaaggctctaaaggagtatctggtccacctggattacctggagaa
actggtctgaaaggagaaaccagtatgataactccattacctggattaccaggaccacag
ggaccagctggtttacctggactccccggagtgcctggcagagttggagctagaggtcaa
ccaggtgattcaggacacccagggccaacaggtgacacaggctttccagggcttggattt
cctggaaactctggtccaaaaggagataaaggacttgcgggaggaagagggtcaccaggt
tgtgaaggaaagattggagatccaggccgggctggaaatctaggactaccaggaggaaag
ggtgatccaggcatggttattcctggagagccaggtagaatgggttcaccwggaggtagt
ggcattcctggcccaaaaggtgatactggatttccaggacttccaggcctaccagggcac
gctggacatgatggtgatgatggcctaagaggagatcctggctcacctggaattcctggg
gatccaggtcttccagggaaacccacagaatgtcttattggcctgccaggtttgccaggt
gacgagggagctacaggcccaccaggaggaagaggtttgctaggttcaaaaggaaaacta
ggccctcctggcctgggtatcccaggaatctttggaaaccctggggaacctggactaata
ggtcctcagggaaatgcaggattacctggtcccaagggacagtctggaaggccaggaatc
tctggtgtgccaggcccaaggggagagccaggtgtcatgggcccattaggagttcctgga
ccacctggcgcatttggaagcccaggcaacccgggtagcagaggttcttttggcttcccg
ggactaaagggaagaaaaggatttctaggacaaaaaggtgaacccggtgataaaggtttt
cctggaccatccgagaccttggttagtactgggaataaaggagaacaaggctcaaaagga
tttcaaggaaggatgggtctaagaggagaaaaaggagatgcaggtgtgcaaggaccacca
ggtcttgttgggtcagaaggaatacctggcctaccaggtgtcaaaggatttatgggtctt
ccagggattcctggaggacaaggatttccaggagcaccaggaaacataggggacatggga
attccaggtcccaaaggacagaaaggatctccagggtttccaggaccatcaggtgactca
gggcaagtaggctctggtggctctccaggtgacaaaggagaccccgggtatccagttcct
gggcctccaggagaaaccggtccaaagggagatcgaggtcccccaggaggtttaggcagc
aaaggagaaaaaggatcccaaggtcagccaggacatacaggagtaccaggaccagatggg
atcagaggggaatctggaggcgcaggaatcccagggcaagtaggacttcttgggggtatc
ggtgctaaaggacttcagggcctcccaggacaaatgggcattagaggccctccaggtgct
gttggagaccctggagaaaatgggcttgttggtgaaagaggtaatcaaggtcaggatggt
atgcctggcaccccaggagataagggagaaccaggggtaccaggcagaggaatccctggc
ctgcgaggtattcctggtcgtaaaggaatcaaaggaaacatggggctgcctggttttcct
gggccaccaggtatgaaaggttgtcggggggagcaaggacccattggacctcctggcttg
atgggattcccaggattccaaggcgcaacaggcatggctattcctggccaaaaagggaat
agaggaattgctggtgcagatgcaagaccaggtgctcccggttttccagggcctcctggt
cttcccactcccagcatgaaaggaagcaaaggtgttagaggagcagatggcataccaggg
ccaacaggcccaaaaggcaacattggtctgccaggtccaaaaggaatggaaggtcagcca
ggttttcctggtgctagaggggatcctggacttgttggattcccaggtgtaaaaggagaa
aagggtaatcaaggacctcctggaccacagggtgcagaagggccaagcggaccaaaaggc
caacatggtccacctggagaccctgggagagtattctctgtcccaggaaacaagggatct
cctggactacccggaagaccagcccaggtcaaccaggactgcctggtccaaaaggagaca
ggggatttccaggacaaagaggaccacctggactga
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