KEGG   Dromaius novaehollandiae (emu): 112988887
Entry
112988887         CDS       T07572                                 
Name
(RefSeq) collagen alpha-3(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne04382  Cornified envelope formation
dne04510  Focal adhesion
dne04512  ECM-receptor interaction
dne04518  Integrin signaling
dne04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dne00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112988887
   04518 Integrin signaling
    112988887
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112988887
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112988887
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    112988887
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dne04147]
    112988887
   00536 Glycosaminoglycan binding proteins [BR:dne00536]
    112988887
Exosome [BR:dne04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   112988887
Glycosaminoglycan binding proteins [BR:dne00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   112988887
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 112988887
NCBI-ProteinID: XP_025965498
LinkDB
Position
Unknown
AA seq 1351 aa
MKGNKGEKGFPGXPGPPGLRGFPGPEGPPGPQGPQGSPGLMGLPGAKGIRGVPGIPGFSG
PPGLPGEPGTVGPPGRPGVPGCNGTKGDRGFPGPPGRRGAPGVAGIPGIKGEKGCPADDY
NEVYGVKGDPGLPGMPGLRGSQGIQGYPGETGPQGPPGVSGVPGRAGPPGPKGLMGMKVI
GNKGRKGDTGLTGPPGPPGTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPVGFTGPVGDSQ
SEKGDRGEPGAQGKPGKEGAPGPPGLPGQKGEQGEPGLAGKQGAKGAKGNTGPAGACGRT
EYYDKVAGEKGDEGLPGPPGPKGQRGMPGPRGPPGDAGRPGVSRPGLRGPPGLPGLKGIK
GEKGQSGLHIVGPPGLPGITGRPGSAGLPGPPGEPGRITFRPGLPGLPGEPGYVGPPGPP
GDTGMKGDEACVCTDCSYIPGAPGLPGSPGPHGQDGIYGREGTPGPKGSPGSPGAPGFPG
PQGLPGFKGDQGRKGSKGDPGYVYPEGPKGEQGDPGTEGDKGRKGSSGFLGRPGSKGSKG
SKGEQGLAGSKGDRGLPGLPGNLGLAGEMGLPGPPGYGPQGTRGLKGSKGVSGPPGLPGE
TGLKGETSMITPLPGLPGPQGPAGLPGLPGVPGRVGARGQPGDSGHPGPTGDTGFPGLGF
PGNSGPKGDKGLAGGRGSPGCEGKIGDPGRAGNLGLPGGKGDPGMVIPGEPGRMGSPGGS
GIPGPKGDTGFPGLPGLPGHAGHDGDDGLRGDPGSPGIPGDPGLPGKPTECLIGLPGLPG
DEGATGPPGGRGLLGSKGKLGPPGLGIPGIFGNPGEPGLIGPQGNAGLPGPKGQSGRPGI
SGVPGPRGEPGVMGPLGVPGPPGAFGSPGNPGSRGSFGFPGLKGRKGFLGQKGEPGDKGF
PGPSETLVSTGNKGEQGSKGFQGRMGLRGEKGDAGVQGPPGLVGSEGIPGLPGVKGFMGL
PGIPGGQGFPGAPGNIGDMGIPGPKGQKGSPGFPGPSGDSGQVGSGGSPGDKGDPGYPVP
GPPGETGPKGDRGPPGGLGSKGEKGSQGQPGHTGVPGPDGIRGESGGAGIPGQVGLLGGI
GAKGLQGLPGQMGIRGPPGAVGDPGENGLVGERGNQGQDGMPGTPGDKGEPGVPGRGIPG
LRGIPGRKGIKGNMGLPGFPGPPGMKGCRGEQGPIGPPGLMGFPGFQGATGMAIPGQKGN
RGIAGADARPGAPGFPGPPGLPTPSMKGSKGVRGADGIPGPTGPKGNIGLPGPKGMEGQP
GFPGARGDPGLVGFPGVKGEKGNQGPPGPQGAEGPSGPKGQHGPPGDPGRVFSVPGNKGS
PGLPGRPAQVNQDCLVQKETGDFQDKEDHLD
NT seq 4056 nt   +upstreamnt  +downstreamnt
atgaaaggtaataagggtgaaaaaggcttccctggcwttcctggtccacctggtcttaga
ggctttcctggcccagaagggcctccagggccacaaggacctcagggttctccagggctt
atgggcttacctggagctaaaggtatacgaggagtcccaggaatacctggattttcaggc
cccccaggtcttccaggtgagccgggaactgttggtcctcctgggcgcccgggtgttcca
ggatgcaatggcacaaagggcgatcgaggttttccaggtcctccgggtagaagaggtgct
ccaggtgttgcaggtatccctggcatcaaaggagaaaaggggtgccctgcagatgactat
aatgaagtctatggtgtgaaaggtgaccctggattgccaggaatgcctggacttcggggt
tcccagggtattcaaggatatcctggggaaactggaccacagggccctccaggagtttca
ggagtgccagggagagcaggacctccaggacctaagggtctcatgggaatgaaagtaata
ggaaacaaaggaagaaagggtgacactggattaactggaccccctggaccaccgggaaca
gttattgtgacattaagtggaccagacaacatgacggacttgaaaggagagaaaggagaa
aaaggatcaagaggactcccagggccagtggggtttacagggccagttggtgattctcag
agtgaaaagggtgatcgaggagaacccggagcgcagggtaaacctggaaaagaaggtgcc
ccaggtcctcccggcttaccgggacaaaagggtgaacagggcgaaccagggttggctggc
aaacaaggagctaagggggcgaaaggaaacaccggtccagctggagcttgtggtcgaaca
gagtattatgataaagtggctggtgaaaaaggagatgaaggactccccggaccaccggga
ccaaaaggtcaacgtggcatgcctgggccaaggggtcctcctggggatgctggtagacca
ggtgtgtcaagacctggtctgagaggtcccccaggacttcctgggctgaaaggaataaaa
ggagagaaaggacaatctggcttgcacattgtaggccctccaggactacctgggattact
ggcagacctggttctgctgggttaccaggtccccctggagaaccaggtagaataacattt
agacctggcctaccaggacttcctggagagccagggtatgtgggacctccaggacctcca
ggagatactggcatgaaaggtgatgaagcttgcgtgtgtactgattgcagctatattcca
ggagcacctggtcttcctggttctcctgggccacatggccaagatggcatatatggtaga
gaaggaacaccaggtcccaaaggatctccaggttctccaggagcaccggggtttccaggg
cctcagggacttccaggttttaaaggagatcaaggacgtaaaggatcaaaaggtgatcca
ggatacgtgtatccagaagggccaaaaggtgagcaaggagatccagggactgagggagac
aaaggaagaaaaggttcaagtggatttctgggaagacctggctctaaaggctcaaagggt
tctaaaggtgaacagggattagctggttcaaaaggagacagaggactaccaggattgcct
ggtaatcttggtcttgctggagagatggggcttcctggaccgccaggatatggaccacaa
ggaacaagaggtctcaaaggctctaaaggagtatctggtccacctggattacctggagaa
actggtctgaaaggagaaaccagtatgataactccattacctggattaccaggaccacag
ggaccagctggtttacctggactccccggagtgcctggcagagttggagctagaggtcaa
ccaggtgattcaggacacccagggccaacaggtgacacaggctttccagggcttggattt
cctggaaactctggtccaaaaggagataaaggacttgcgggaggaagagggtcaccaggt
tgtgaaggaaagattggagatccaggccgggctggaaatctaggactaccaggaggaaag
ggtgatccaggcatggttattcctggagagccaggtagaatgggttcaccwggaggtagt
ggcattcctggcccaaaaggtgatactggatttccaggacttccaggcctaccagggcac
gctggacatgatggtgatgatggcctaagaggagatcctggctcacctggaattcctggg
gatccaggtcttccagggaaacccacagaatgtcttattggcctgccaggtttgccaggt
gacgagggagctacaggcccaccaggaggaagaggtttgctaggttcaaaaggaaaacta
ggccctcctggcctgggtatcccaggaatctttggaaaccctggggaacctggactaata
ggtcctcagggaaatgcaggattacctggtcccaagggacagtctggaaggccaggaatc
tctggtgtgccaggcccaaggggagagccaggtgtcatgggcccattaggagttcctgga
ccacctggcgcatttggaagcccaggcaacccgggtagcagaggttcttttggcttcccg
ggactaaagggaagaaaaggatttctaggacaaaaaggtgaacccggtgataaaggtttt
cctggaccatccgagaccttggttagtactgggaataaaggagaacaaggctcaaaagga
tttcaaggaaggatgggtctaagaggagaaaaaggagatgcaggtgtgcaaggaccacca
ggtcttgttgggtcagaaggaatacctggcctaccaggtgtcaaaggatttatgggtctt
ccagggattcctggaggacaaggatttccaggagcaccaggaaacataggggacatggga
attccaggtcccaaaggacagaaaggatctccagggtttccaggaccatcaggtgactca
gggcaagtaggctctggtggctctccaggtgacaaaggagaccccgggtatccagttcct
gggcctccaggagaaaccggtccaaagggagatcgaggtcccccaggaggtttaggcagc
aaaggagaaaaaggatcccaaggtcagccaggacatacaggagtaccaggaccagatggg
atcagaggggaatctggaggcgcaggaatcccagggcaagtaggacttcttgggggtatc
ggtgctaaaggacttcagggcctcccaggacaaatgggcattagaggccctccaggtgct
gttggagaccctggagaaaatgggcttgttggtgaaagaggtaatcaaggtcaggatggt
atgcctggcaccccaggagataagggagaaccaggggtaccaggcagaggaatccctggc
ctgcgaggtattcctggtcgtaaaggaatcaaaggaaacatggggctgcctggttttcct
gggccaccaggtatgaaaggttgtcggggggagcaaggacccattggacctcctggcttg
atgggattcccaggattccaaggcgcaacaggcatggctattcctggccaaaaagggaat
agaggaattgctggtgcagatgcaagaccaggtgctcccggttttccagggcctcctggt
cttcccactcccagcatgaaaggaagcaaaggtgttagaggagcagatggcataccaggg
ccaacaggcccaaaaggcaacattggtctgccaggtccaaaaggaatggaaggtcagcca
ggttttcctggtgctagaggggatcctggacttgttggattcccaggtgtaaaaggagaa
aagggtaatcaaggacctcctggaccacagggtgcagaagggccaagcggaccaaaaggc
caacatggtccacctggagaccctgggagagtattctctgtcccaggaaacaagggatct
cctggactacccggaagaccagcccaggtcaaccaggactgcctggtccaaaaggagaca
ggggatttccaggacaaagaggaccacctggactga

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