KEGG   Dromaius novaehollandiae (emu): 112990423
Entry
112990423         CDS       T07572                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne04137  Mitophagy - animal
dne04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112990423 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    112990423 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dne04121]
    112990423 (AMFR)
Enzymes [BR:dne01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     112990423 (AMFR)
Ubiquitin system [BR:dne04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112990423 (AMFR)
  Multi subunit type E3
   ERAD complex
    112990423 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    112990423 (AMFR)
SSDB
Motif
Pfam: G2BR zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_11 zf-rbx1 zf-ANAPC11 zf-RING_UBOX zf-RING_16 zf-RING_5 Prok-RING_4 zf-C3HC4_4 zf_RING_Vps8
Other DBs
NCBI-GeneID: 112990423
NCBI-ProteinID: XP_025967901
LinkDB
Position
Unknown
AA seq 548 aa
MLVAKLIQYMVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLTLLIAMLLSCCGLAVVCGVIGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEAMFAVATPEELA
VNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNITDSHHVREDHQ
RENLDENLVPVAVAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRPDSIRPALN
SSVERHSTDQEDTETVIQTERVPLELNSRLEEMVEFSEVEAEPSETEDFEARGSRFSKSA
DERQRMLVQRKEDLLQQARKRYLNKTSDEELITEKPSPSEGASADPVTLRRRTLAAAAER
RLQMQQNS
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgctggttgctaaactaatccagtatatggtgtttggtcctcttcgtgttagtgagagg
cagcatctcaaggataaattctggaatttcattttctacaagttcatctttatttttggc
gtgttgaatgttcagacagtggaagaagtggtcatgtggtgcctctggttctccggactt
gtgtttcttcatctcatggttcagctctgcaaggatcgctttgaatatctttccttttct
cctaccacacccatgagcagccacatcagagtcctgaccctgctcatagccatgctcctg
tcctgctgcggattagcagtcgtctgcggggttattggctacacccatggaatgcacacc
ctggctttcatggcagcggagtctctgcttgtgacagtcagaactgctcatgtgatttta
cgatatgtaattcatctctgggatctcaaccatgaaggaacgtgggagggcaaaggcact
tatgtgtactacacagactttgtcatggagctaaccttgctttcgctcgacttgatgcat
catattcatatgctgttatttggcaatatctggttgtcaatggctagcctggtgattttt
atgcagctgcgttacctgttccatgaagttcagcgaagaattcgtcggcataagaactac
ctgcgcgtggtcggaaacatggaagctatgtttgcagttgcaacaccagaagagctagcg
gtcaataatgacgactgtgccatttgctgggactccatgcagtctgcacgaaaactccct
tgcggccatctcttccacaactcatgcctgcggtcctggcttgaacaagacacatcttgc
ccgacctgcagaatgtctcttaatatcactgacagccatcatgtgagggaggatcaccaa
agggagaacctggatgagaacttagtgcctgtggcagtagcagaaggcaggccacgcttg
aaccagcacaatcacttcttccactttgatggctcccgaattgccagctggctgcccagc
ttttcagtggaagtgatgcatactacgaacatccttggtattgcacaagccagcaactcc
caacttaatgctatggcccatcagattcaagagatgttccctcaggttccttatcattta
gttctacaggacctgcagctaacccgttctgtagagataaccactgacaacatcttagag
gggcgcatccaggtacctttccccacacagcgtccagatagcattagacctgcattgaac
agttctgtggaacggcatagtactgatcaggaggatacggaaactgtcattcagactgag
agagtgccacttgagctcaactcaagactggaagaaatggtggaattcagtgaagtggaa
gcagaacctagtgaaacagaagattttgaggccaggggaagtcgcttttcaaagtcagct
gatgaaaggcagcgtatgttggttcagcggaaggaggacttgttgcagcaagctcgaaag
cgctatttaaacaaaacctctgacgaggagttgatcacagagaagccctctccgtctgag
ggcgcttccgccgatcccgtcaccctgcgtcgcagaacgttagctgccgccgccgaacgg
agacttcagatgcaacaaaactcttag

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