Dromaius novaehollandiae (emu): 112991046
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Entry
112991046 CDS
T07572
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112991046 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dne03019
]
112991046 (EDC4)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112991046 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112991046 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Prp19
WDR55
Uteroglobin
NBCH_WD40
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
112991046
NCBI-ProteinID:
XP_025969017
Ensembl:
ENSDNVG00000017075
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MASSSSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSL
AKPVHRSISLGVLQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIREEILVNIKRPDNTPLNTSRRIIWCPFI
PDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDVAASIPSHGSH
EEFAFPDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLANDAKPKLMTPDAF
MTPSTSLQQITVSPGSSVSSLTAVTAMSSASVTDTSMPRASEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNPSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAGPSGLPTEVLEPSHHADSMASAASALHLLSP
RNRHNSDHSHHSLDMPQVEVDRLNAPSLLETALTQENVSSDSVVSQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
TQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQL
QEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMEPIAGQLSNTIATKLTAVEG
TLKENITKLVKSKNLTDTVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINE
TFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSTTEQLASTIAASVHAE
VQHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHL
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHN
TLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctctagcatcgacatcgaggacgcgacccagcacttgcgggacattctc
aagctggaccggccgggaggttcagtaaatgagaaccagagaccgtcaaattcgtacaac
ggggatctgaatggactgctggtgcctgatcccatagtggctggagatggaccttctttg
gctaagccagtgcatcgcagcatttctctgggagtcctgcaggagaagcaagtcatctgc
ctttccggtgatgacagctccacttgcatagtgatatcggcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgccagatatgactgggagcagaaatactactatggcaatctgatagctgtttca
aattcttacctggcttatgccatcagagctgccagtaatggctccgctatggtgcgggtg
ttgagcgtcagcactgctgagcggaccttgctgaaaggattcacaggtggcgtggcagac
ctggcttttgcccatctcaactccaaccagctggcatgcctggatgaggctggcaacctt
tttgtctggcgccttgccatggataaagagaaaattcgagaggagatcttagtgaacatc
aaacgacctgacaacaccccactgaacacctctcgaagaatcatctggtgtcctttcatc
ccagatgataatgaggagagtggtgaagagggaagtcaaacgttggcattgttgcacgag
gacagggcagaggtgtgggatttggacattattcgaacaaacaacagctcctggccagtg
gaagtgcctagcatcaaagaaggcttcattgtagtgaaaggtcacagcacgtgcctgagt
gagggagcactttctccagatggaactgtgttggccacagcaagccatgatggttttgtc
aaattctggcagatctatattgaggggcaagatgaaccaaggtgtcttcatgagtggaaa
ccccatgatggtaggcctctctcctgcctgctcttctgtgataaccataaaaagcaagac
ccagaggttcccttctggagatttcttatcacaggagcagatcagaacagagagctgaag
atgtggtgcactgtgtcttggacctgtctgcagactgtccgcttttctccagacatcttc
agctctatgagtattcttcccagcctgaaagtctgcctcgacctttctgctgaatatctg
atactgagtgatgtacaaagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
gagggcaaagcttactttagctccatctctgagttcctccttacccacccagtcctaagc
tttggcatccaggcagtgagccgctgccggytaaggcatactgaagtgctcccagcagaa
gaggaaaatgacaacttgagtgtggaaggtgctcaaggagcaggggctgttgagtcagca
gcaggcgtacttataaaactcttctgtgtgcacactaaggccctacaggatgtgcagatc
agattccagcctctccatagtcctgacgtggctgcatccataccttctcatggttctcat
gaagaatttgcctttccagaccatatggctgatctaagcacagaagggctgggatctgaa
aagggatctgtgcatggctctcaaccagacttgcggcgtattgctgatctccccgtacca
gcagactttctttctctcgcaaatgatgccaagcctaagttgatgactccagatgcattc
atgacaccaagtacatctcttcaacagatcactgtgtctccaggcagtagcgtcagttcc
ctgactgcagtcacagccatgagtagcgcttctgtcactgacacctctatgcccagggcg
tcggaagacttgacggtgagccccaagatgcagctggacaccagcctcacgctgagtagc
agtagcagcagtcttcaaaccagtcctaggagccattcagttcttatccctggcctccct
gacaagctaacgccaaaggcacccgttccagtcactccaggaaacccctctctagctctg
gaactgcaggaagtggagcccttggtggtgcctcaggcttctcccacccgtgaacgttcg
ccagatgtcatttcctctgcttccacagccatgtcccaagatatcccagagattgcttcc
gagaccttgcagcgcagctttgcagctggtccatctgggctccctacagaggtgctggag
cccagtcatcatgcagacagtatggcatcagctgcttcagccttgcatttgctgtctcca
aggaaccggcacaattccgatcacagccaccactctttggacatgcctcaggtggaggtg
gacagactgaatgctccatcattactggagactgctttaactcaggaaaatgtgtcttct
gacagtgttgtgagtcagccgtggccagcagctcctgacataaccagagaaactaggaac
agcatggcggacagcccgagggatgaggttgaagaaaagcacaagagctcttcctatcac
cgacacagctaccacctgctgcagcatgacagccaggatgctagcgcagagcaaagtgac
catgatgatgaagttgcaagtttggcttctacatcaggtggatttggtgccaaagcatct
acgcagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaag
ctaaaacggaagggcaagaaagatgacggggatgtgaaccagtcaccaagatcatctaac
aaccaggtgacaccygagttccaggatgagctgatgtgcatattgaggagccaacagcgg
gagctctctgagctgcgtcagaaccagatggagctgttgcagagactcacagatcacctg
gatgccattcagagctccctcatgggccacgtggagagggtgattgactcccagcaggag
caggaacagaggagactagacagagcactgacggaaggacagcagcgcaatggacagctc
caggagcatctttctcagcagctctctcagtccctctccactgcagtgtgtaatcgtctg
gagagaaccattcgtgaagagatgaagaagacagtaccccagtgcatttccaagagcatg
gagcctattgctggccagctaagtaacactattgccaccaagctcactgctgttgagggc
acactgaaagagaacatcaccaagctagtgaaatcaaagaaccttacagatactgtcgtg
agggcaacagctgataccctgcaaggaccgatccagtcagcgtacagagaagcattccag
agcgttgtgttgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgaa
accttcaagcagggcacacaggaatatatccagcagcttgagactcacatgaagaacaag
aaagcacgagaacaggaggcccgggacccgctgctgaatcagcttcgacagctcatcagc
accttccagagcaccactgagcagctggcttccaccatcgcggccagtgtccatgctgag
gtgcagcatcagctgcatattattgttggcaacatgcaggagtctattttggcccaggtg
cagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaagcagctgtcacc
tcaagcattgtccaggcaatgcgctcagcggcagggactccaatcccatctactcatctg
gacttccagtctcagcaaactcacatcctgcagctgctgcagcagggacacctcaatcaa
gctttccagcaggctctaacagcggccgatctcaatctggtcctgtatgtctgtgagact
gtggatcctcagcaagtgtttggccagcatccatgcccgctgtcccagcctgtgctcctg
tctctcattcagcagctctcctcggatttgggtactcgtacagaactgaaactgaattac
ttggaggaagcagtgatgcacctggaccacagtgaccccattacccgagaccacatgggg
tctgtcatgaaccaggtgcggcagaagctcttccagttcctgcaggtggaaccccacaac
acgctgagcaaacctgcccgtcgcctcatgattatgcttcagggcctggtcacccctggc
atgacctag
DBGET
integrated database retrieval system
