Dromaius novaehollandiae (emu): 112992578
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Entry
112992578 CDS
T07572
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne04510
Focal adhesion
dne04512
ECM-receptor interaction
dne04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112992578 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112992578 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112992578 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dne04147
]
112992578 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
dne00536
]
112992578 (COL4A5)
Exosome [BR:
dne04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112992578 (COL4A5)
Glycosaminoglycan binding proteins [BR:
dne00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112992578 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112992578
NCBI-ProteinID:
XP_025971540
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search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NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtgaaccaggtgaaataattacatccttgctgccaggacagaagggcgaccca
ggatttccaggtcttccagggatacctggcccccccggctccgtgggtataccaggtcca
actggccctccagggcccccaggtttaactggacctcctggtccaccagggctgccagga
cctaagggtaatatgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacagggt
cttcagggacctccagggccaccaggacaaattggagaacagaagagaccaaatgacatt
gaatttcagaaaggagatcagggtattccaggtgatccaggcccaccaggacttcctggg
ccacaaggccctcctggtcttcccggtggcgtaaaaggtgaaaaaggtgagcaaggagaa
ccaggcaaaagaggaaagcctggcaaagatggagatcctggtcagcctggtctagatggt
ttacctggtgggcctggaataaatggtgctccaggaagagatggtgaaaagggtgaaaaa
ggtgacgctggtccccctggtcctcctggaagtgtcatttcaagaccagacattgatgca
gcagtgggaccaaaaggtagcaaaggattgccaggacttccaggagccaaaggggagcgt
ggattctctggtaggccgggcccrcctggcttgccaggttctccagggatcacgactgtt
gggcctcctggcccacctggcttacctggcgagagaggacagaagggagatccaggttta
cctggtgtttccattcctggacagccaggacttgatggaccccggggatccccaggacca
ccaggtcccccaggaccacctgcgccatcagttcctcctggtgaagggttatgtgagcag
ggaccrccaggtcctcctggaattccaggacagcaaggctttacgggggagcgaggccaa
aaaggtgatcaaggagacacatgcttcaattgcataggaactggaatatctgggcctcct
ggggagagaggacctccaggacctccaggtagtccaggttctcctggttttcctggacca
aaaggtgaaaaggggcttcttggattaactggccttgtaggaccaccaggatttccaggg
cccccaggtgcccctgggagacctggtcctaaaggagacccaggggatgtcctgacttct
ccaagaatgaaaggtgacaagggagatcctggcttcccaggacctccaggtcttcctggc
atagatggcactcctggacgagatggactgccaggtctgcctggccctaagggggaacct
ggcagtgttgcattcaaaggagaaatgggaattccaggtgacccaggaataccaggtctt
cctggagacaaaggacttcctggacctcctggatttggtccacaaggttcacctggtgaa
aagggcattcaaggtgtatcaggtcgtccaggacctcccggagttcctggtccaaaaggt
gaacctggtcagactattacagaaccaggagtacctggcccacctggtcctccgggcaga
aatggtgacccaggtcttccaggggatcctggtcagccaggtcagcgtggcctgccaggc
atcccaggtgtgaaaggagagccaggtattcctggcattggacttccaggtccaccaggc
ccaaaaggtttcccaggtactccaggcccccccggagctccgggaactccaggtcgccct
ggtctagatggacctcctggaccacctggtttcccaggacagaagggggatcgtggattt
ggagttccaggaccacctggatcccctggaccaccaggcttaaaaggagttcaagggccc
aaaggtgatactggcttcccaggaaaccctggtattccaggacgagcaggttttgatgga
actccagggcccaaaggtgagcctggaccaagcggaccaccaggccttccaggcccacca
ggcatccccggtattggtggccaaggtccacctggacctcctggacttccaggacctgtt
ggcccaccaggttccccagggttgcagggcattccaggagagaaaggagatccaggtcct
ccaggcttcgacgttcctggtcctccaggtgaccaaggaactccaggatatccaggacca
cctggtctcccagggcctcagggttcgcctggaccaccaggacgggatggaatacctgga
tttccaggtgccaaaggcgagatgggtgtcatgggagcccctggtcctccagggcctcca
ggaactcctggaagaaatggccttcctggcttgaaaggcagtaatggattacctggtcag
ccaggacctcctggaccagtaggacagaaaggcatcaaaggtgaagcaggcctgccgggc
ccacctgggaaagttgatccaaaacagctgggagcaaaaggagaaaaaggcgaaccaggt
gttccaggtattcctggcttatcaggacagaaaggttatcaaggtctcccaggtgaccct
ggcccaccaggacttrgtggcccaccaggtgcaccaggattgccaggcatcaagggagac
acaggacttcctgggcagccaggaccaacaggacctccagggttaaaaggtgccatggga
gagatgggccttccaggtcccccagggattaaaggcagccaaggagtaggaggacgtcca
ggccagcctgggccagccggatttcctggactgaagggggagaaaggtgaccctggtctt
tcagacattggtattcctggtccccctggatcaaagggtgatcttggtttgcctggatac
ccaggcagtccaggcagtaaaggtatagctggaaatcctggtctgcctggattaccgggc
aatccaggtgcaaaaggagagccaggacttcctggattcccaggaacgccgggaattcca
gggccaaaaggtatcgaggggcctccaggtaatcccggtctgcccggaccgcctgggcca
gtaggtgatattggccgtcctggccctcctggtccttcaggagagaagggacagcctggt
cgagatggtatccctggaccagctggtcagaagggagaaccaggtctgccaggttttggg
cgcccaggacctccaggactcccaggattatcagggcaaaagggtgaactggggttacct
ggcccaccaggaccccctggacttccaggtctgaagggagaaccaggtttccagggattt
cctggtctacaaggtccaccaggtccaccaggattaccagggccacctctggaaggtcct
aaaggtagccctggccctcagggcattccaggaagaccaggtcctccaggtccaccaggc
ccagaaggtccccgggggccaccaggcaatggaggacttaaaggggaaaaagggaaccca
ggtcaacctggtccacccggcctgacaggtcaaaagggagatcaaggatcacctggacgc
cagggggatcctggtcgtcccggcctgaatggaatgaaaggtgacccgggggttccaggt
gtgccaggattcccaggtatgaagggtccccctggacctgcaggacctgcyggcctcacg
ggcagtcaaggactgccaggcccaccaggtccaccaggtttaccaggtgccattggacga
agcattgttgtcaaaggtgaccctggtccaccaggtcctccaggacaacctggctcaaaa
gggccacctggattgccagggccacagggattgccaggtccaattggtcttcctggtgat
ccagggcgagatggactccctgggtttgatggtccaggaggacgyaaaggcgagagaggt
cttccaggccaaccaggttcacgaggartacagggaccccctggtcctgatggcctacaa
ggcccacctggtcctcctggaacagcctcagtcgctcatggattccttataactcgtcac
agccagaccagggatacaccactatgtccacaaggaacattaagaatatacgatggattc
tctcttctgtatgtgcaaggaaacgagagagcccacggacaagatttgggtactgctggg
agctgtctccgacgtttcagcaccatgccgttcatgttctgtaacatcaacaatgtttgt
aattatgcctcaaggaatgactattcctactggctatcaactccagagccaatgccgatg
agcatggagccactcactgggcagagcattcagccgttcattagccgatgcgttgtgtgt
gaggctcctgctatggtgatagctgtccacagtcagaccattcagattccttcgtgtccg
ccaggctgggactccctttggattggttactcgttcatgatgcacactagtgctggagca
gagggctctggacaggccttggcatcgcccggatcctgtttagaagaattccgctcagct
ccatttattgagtgccatggtcgtggcacttgtaattactatgccaattcgtatagtttc
tggctggcaactatagaggtgtcagaaatgttcagtaaacctcagtcagagactctgaaa
gctggagacttgaggacgcgtattagtcgttgtcaagtttgcatgaagaagacgtaa
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