KEGG   Dromaius novaehollandiae (emu): 112995152
Entry
112995152         CDS       T07572                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112995152 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dne03041]
    112995152 (CDC40)
Spliceosome [BR:dne03041]
 Complex C
  Other components
   Step II factors
    112995152 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 EIF3I WDR55 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_Vps41
Other DBs
NCBI-GeneID: 112995152
NCBI-ProteinID: XP_025975729
Ensembl: ENSDNVG00000013436
LinkDB
Position
Unknown
AA seq 555 aa
MKGNHRYLQYTASGATRPPRQGGPLGRLRCAXGRGVTRPEDVETGVHLDPAIKEVQYNPT
YDTMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFVTYGYALDPSID
NPEVATKYIGSVEEAEKNQGLTVFETGQKKIEKRKKFKENDASNIDGFLGPWAKYVDEKE
VAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVN
LRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRC
LRTFIGHSKAVRDISFNNAGTKFLSAAYDRYLKLWDTETGHCISRFTNKKVPYCVKFNPD
EDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRV
WEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKG
HMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETS
KVITCGWDGLIKLWD
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaaggaaatcataggtacctgcaatacactgcttcaggtgcaacccgcccgccgcgg
caaggcggccccctcgggaggctgcggtgcgcagsggggcggggtgtcacacggcctgaa
gatgtggaaacaggagtccaccttgatcctgctatcaaggaagttcaatacaatcccact
tatgataccatgtttgcccctgagtttggaccagaaaacccatttaggactcagcaaatg
gctgcacctagaaatatgctttctggatatgcagaaccagctcacatcaatgayttcatg
ttcgaacaacaaagaagaacatttgtaacctacggttatgcattagatccctctatagat
aaccctgaagttgctaccaaatatattggttctgtagaagaagctgaaaaaaatcaaggt
ttaacagtgtttgaaacgggacagaagaaaatagaaaaaaggaagaaattcaaagagaat
gatgcatctaacattgatggcttcttgggaccatgggcaaaatatgttgatgaaaaagaa
gtagccaaaccctcagaagaagaacagaaagagttggatgaaataacagctaagaggcag
aagagaggaaaactagaagatgataaacctggagaggagaagactatattacatgtcaag
gaaatgtatgactatcaggggagatcttatcttcatgtccctcaagacgttggagttaat
ctccgttccacagtgccacctgagaaatgctatcttccaaagaaacaaatccatgtatgg
tctggacatacaaagggtgtcagtgcagttagactgtttcctctctctgggcacctactg
ttgtcttgctcgatggattgcaaaattaagctatgggaggtgtatggcgatcgaagatgt
ctacgaacatttattggacacagtaaagctgttcgagacatctcttttaataatgctggc
actaagtttcttagtgcagcatatgaccgctaccttaaactctgggacactgaaacaggg
cattgtatttcaagattcacaaacaagaaggttccttactgtgtcaaattcaatcctgat
gaagataaacaaaatctctttgttgcaggaatgtcagataagaaaattgtgcagtgggat
attcggagtggtgagattgtgcaggaatatgataggcatttgggagctgtcaacaccatt
gtgtttgtggatgaaaatagacggtttgtgagtacatctgatgacaagagtttaagagtc
tgggaatgggatattcctgtagacttcaagtacatagctgagccaagtatgcactcgatg
ccagctgtgactttgtctccaaatgggaaatggttggcttgtcagtcgatggataaccaa
attctgatttttggagctcagaacagattcagattaaataaaaagaaaatcttcaaaggt
cacatggtagctggctatgcctgtcaagtggatttttcacctgacatgagctacgtgata
tctggagatgcagatggaaaacttaatatctgggactggaagacaacgaaactctacagc
aggttaaaagcacatgataaagtctgtattggtgcagtctggcatccacacgaaacgtct
aaagtcattacgtgcggctgggatggtcttattaaactatgggactaa

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