Dromaius novaehollandiae (emu): 112996534
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Entry
112996534 CDS
T07572
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
dne
Dromaius novaehollandiae (emu)
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dne03019
]
112996534 (HTT)
04131 Membrane trafficking [BR:
dne04131
]
112996534 (HTT)
03029 Mitochondrial biogenesis [BR:
dne03029
]
112996534 (HTT)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112996534 (HTT)
Membrane trafficking [BR:
dne04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112996534 (HTT)
Mitochondrial biogenesis [BR:
dne03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112996534 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
112996534
NCBI-ProteinID:
XP_025977851
Ensembl:
ENSDNVG00000004455
LinkDB
All DBs
Position
Unknown
AA seq
3006 aa
AA seq
DB search
MELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGASRSLRAALW
RFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPKIMAAFGNFANDNEI
KVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNVLLGLLVPVEDDHPT
LLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQLIQVYELTLHYTQHQ
DHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDESTGRNRSGSIVELIGKIL
LGEEEGLEDDSETRSDVSTASFAASMKGEISSELASSSGVSTTGSVVSSAADPTGHDIIT
EQPRSQHTLQSDSVDLTSCDLTSTATEGEDDDVLSRSSSQISAVQSDPTIDLNDGTQASS
PISDSSQTTTEGPDSAVTPSDSSEIVLEGTESQYSGMQIGQLQDEEDEAANILQDDSSES
FRNSSIALQQPHLLKTMSHSRQPSDSSVDKFTSKEDAADPGDHENKPSRVKGDIGHYTDG
NSAPLVHCVRLLSASFLLTGEKGALVPDRDVRVSVKALAVSCVGAAVALHPESFFSKLYK
KPLEAMGEEYEEQYVSDILNYIDHGDPQIRGATAILCGTIVNSILIKSRFDVEKWLTTVR
SLTGNLFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCIMSLCSSSYSELGLQLVVDLLT
LRNSSYWLVRTELLETLAEVDFRLVNFLEGKTDSLHRGVHHYTGLLKLQERVLNNVVIYL
LGDEDPRVRHVAAASLMRLVPKLFYNCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHF
AVSTITRTYRGYSMLPSPTDVTVENNLSRVIAAISHALTTSTTRALTFGCCEALCLLSTT
FPVCTWSMGWHCSVSQPSPSDEGQKGCTIGMAGMVLSLLSSAWFPLDLSAHQDALILAGN
LLAASAPKCLKNPWSVEEDANQGVAKQEEPWPALADRTLVTLVEQLFSHLLKVINICAHV
MDDIAPGPAVKAALPSLTNPPSLSPIRRKGKERESVEQASVPMSPKKGAETSPATRQTDA
AGPVPTSKSSSVGSFYHLPSYLKLYDVLKATHANYKVTLDLQNSNEKFGCFLRSALDVLS
QILELATLQDIGKCVEEILGYLKSCFNREPTMATVCVQQLLKTLFGTNLASQYDGLSSNP
SKSQGKAQRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVLQ
KVSTQLKTSVTSVTKHRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQL
VQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQII
GIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSML
LRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHDALGVLN
TLFEILAPSSLRPVDMLLRSMFVTPKTMASVSTVQLWISGILAILRVLISQSTEDIVLSR
IQELSFSPYLISCQAINRLRRGENNVSAPEDCTEVKQAKYLPEETFSRFLLQLVGILLED
IVTKQLKVDMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTGDGSDGSFYT
LESLSDLVQSMIPTHPSLVLLWCQILLLVNYTNYNWWSEVHQTPKRHSLSTTKLLSPQIS
GDSDESDLESKRGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHVQDLINLSHEP
PVQDFISAVHRNSAASGLFIQAIQSRCENLAAPTILKKTLQCLEGIHLSQSGAVLTLYVD
KLLCTPFRVLARMVDTLACRRVEMLLAATLQNSITQLPVEELDRIQEYLQNSGLATRHQR
LYSLLDRFRLMVAPDTTSPSPLVTSHPLDGENQPPLENVILDKDWYVSLVRSQCCIKSDS
ALLEGAELVNRIPEPELNSFMASKEFNLSLLAPCLSLGMNEISRDQKSSFFETARRVTLD
HVSTIVQNLPATHQVFQPLLLTEPSAYWKKLSDIFGDEVMYQSVMTLCRALAQYLLLLTK
LPAGLRVPPDKERDILKFIVMSVEAVSWQLIHDQIPLSIDLQAALDCCCLTLQQPNLWNL
LASAVNVTYACSLINCIRFIIEAVAVEPGNQLLSPERKKNTSKGLSEGEADSNTQRTKHI
AAACEMVAEMVECLQTVLALGHKRNSSIPAFLTPVLKNIIISLARLPLVNSYTRVPPLVW
KLGWSPKPAGDFGTVFPEIPVEFLQEKEIFKEFIYRINTLGWISRTQFEETWATLLGVLV
TQPIVMDQEENQQEEDTERTQINVLAVQAITSLVLSAMTIPVAGNPAVSCLEQQPRNKAL
KALDTRFGRKLSVIRGIVEQEIQAMVSKRDNIATHHLYQAWDPVPSLSPATTGALISHEK
LLLQINTEREIGDMDYKLGQVSIHSIWLGNNITPLREEEWGEDEEDENDMPAPSSPPTSP
INTRKHRAGVDIHSCSQFLLELYSQWILPSNPSKRTPVILISEVVRSLLAVSDLFTERNQ
FEMMYTTLTELRKVHPSEDEILVQYLIPATCKAAAVLGMDKAVAEPVSRLLESTLRSTHM
PSRIGALHGILYILECDLLDETAKQLIPIISEYLLSNLRGVAHCVNVHNQQHILVMCAAA
FYLIENYPLDVGPEFSAGIIQMCGVMVSGSDESTPSIIYHCVLRGLERLLLSEQLSRLDS
ESLVKLSVDRVNVQSPHRAMAALGLMLTCMYTGKEKISPSRTTDANPAAPDSESVIVAME
RVSVLFDRIRKGFPFEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVV
YKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISAILPHI
ISRMGKSEQVDINIFCLVAIDFYRHQIDEELDRRAFQSVFEVVASPGTPYHRLLTCLQNV
HKITAC
NT seq
9021 nt
NT seq
+upstream
nt +downstream
nt
atggaactcttcctcctctgcagtgaggacgcagaatctgatgtccgtatggttgctgat
gaatgccttaataaagttattaaagctttgatggattcaaatcttcctaggttacaatta
gaactgtataaagagattaaaaagaatggtgcttcccgaagtctacgtgctgcactctgg
agatttgctgagcttgcccatctagttcggccacaaaagtgcagaccstacttggtgaac
ctattgccctgtctaacacgaataagtaagaggcctgaagaatcggtacaggagacacta
gctgcagcgataccaaaaatcatggcagcatttggcaactttgcaaatgacaatgagatt
aaggttttattgaaggctttcattgctaatcttaaatccagttccccaactatccgtcga
acggcagcaggatcagcagtaagcatctgtcaacattcacgaagaatgcagtatttctat
gcctggttattgaatgtacttttaggcttgttggttcccgtagaagacgatcatcctact
cttttaattcttggtgtgttgctcacactaagatatctcatacctttattgcaacaacaa
gtaaaggataccagcctgaaaggcagctttggtgtaacaagaaaagagacggagatttcg
ccttcaccggaacagcttatacaggtttatgaattgactctgcattacactcagcatcag
gaccacaatgttgtgactggagctttagaattattacagcagctctttcgaacgccacca
cctgaacttctgcacgccctgaccgcttctgggggcattgcacaggtcagtgtatccaaa
gatgaatctaccggcaggaaccgcagtgggagcatagtggaacttataggtaaaatactt
cttggtgaagaagaaggtttggaggatgattctgaaactcgatcagatgtcagcactgca
tcctttgcagcttctatgaagggtgagataagcagtgaactggcttcttcatcgggtgta
tcaacaactgggtcagtagtgagttcagctgctgatcctactggacacgatatcattact
gagcagccacgttcacagcatacattgcagtcagactctgtagacctgacgagctgtgat
ttgaccagtacagctactgagggagaagatgatgatgtgcttagtcgaagctccagccaa
atcagtgctgtccagtcggatcccactatagacttgaatgatggtacacaggcttcctca
ccaattagtgatagctctcagactactacagaaggtccagactctgctgtaaccccttcg
gacagttctgaaattgttttggagggtactgaaagccagtattctggaatgcagattggg
cagctgcaggatgaggaagatgaggctgcaaatattctccaagatgattcatcagagtct
ttcagaaattcttccattgctcttcaacagcctcatctgttgaaaaccatgagccatagt
aggcagccttctgatagcagcgtagataaattcacatcaaaagaagatgcagcagatcct
ggtgatcatgaaaataagccttccagagtaaagggagacataggtcactataccgatgga
aattctgcacctttagtgcactgtgttagacttctgtcagcctcttttctacttactggg
gagaagggagctttagttcctgatagggatgtaagagtcagtgtaaaagccctggcagta
agttgtgttggagcagctgttgcccttcaccccgagtctttcttcagcaaactgtataag
aaaccccttgaagccatgggagaagagtatgaagagcaatatgtatcagatattctgaac
tacattgaccatggagatccccagattagaggagctactgccattctctgtggaacaatt
gtcaactctattctaattaagtcccgctttgatgtggaaaaatggctaacaactgtcaga
agcttaacaggaaacctcttttccttggtagactgcataccactgttgcagaagacactg
aaagatgagtcctctgttacatgcaaactggcttgtacggctgtgaggcattgcatcatg
agcttatgtagtagcagttatagtgaactaggtttacagttagttgtcgacctccttaca
ttgaggaatagctcatactggctagtaagaacagaacttctggaaacgcttgcagaggta
gattttcgactagtcaatttcttggaaggaaaaacagacagcttgcacagaggtgttcat
cactatactggtctcctaaaactccaggagagagtgctcaataatgttgtaatctatctg
cttggagatgaagatccaagagtgcgacatgtagctgcagcttctttaatgaggcttgtt
ccaaagctgttttataactgtgatcaaggacaggccgatccagtcgtggcagtagcaaga
gatcaaagcagtgtctacctgaaactactaatgcatgaaacacagcctccatctcacttt
gcagtgagcactatcaccagaacatacagaggttacagtatgctgccaagtccaacagat
gtcactgtggaaaacaatctttcaagggttatagcagcaatttcccatgcgttgacaaca
tccactacaagagcccttacgtttggctgctgtgaagctttgtgtctactctccacaaca
tttccagtctgcacctggagcatgggctggcactgcagtgtttcccagccaagtccttca
gatgaaggtcagaagggctgtaccattggaatggctggcatggtcctctctctcctttca
tcagcctggttccctctggacctttctgcacatcaggatgctctgattttggctggaaac
ttgcttgcagcaagtgctcccaagtgcttaaagaatccctggagtgttgaagaagatgct
aaccaaggtgttgcgaagcaggaagaaccctggccagctctggcagaccgaactcttgtt
actttagtagaacagcttttttctcatctgctgaaggtcattaatatttgtgcacatgta
atggatgacattgctcctggtccagcagtaaaggcagcgttaccttctctcacgaaccca
ccttctcttagcccaattcggaggaaggggaaagagagggagtctgtagaacaggcttct
gtaccaatgagccctaaaaagggtgctgaaactagtccagctactaggcaaaccgatgct
gctggacctgttccaacaagtaaatcgtcttcagtaggaagcttttatcatcttccatca
tatctgaagttatatgatgtcttaaaagctactcatgctaattataaggtcactttggat
ctccagaacagtaatgaaaagttcggatgtttcttacgatctgctttagatgttctgtct
caaattttggaacttgcaactcttcaagacattggaaagtgtgtagaagaaattttggga
tatctaaaatcatgtttcaacagagaaccaacaatggcgacagtttgtgtgcagcagtta
ttgaagacattgtttgggacaaacttggcttctcagtatgatggcttgtcttcaaacccc
agcaaatctcaaggcaaagcccaacgcttaggttcttctaatttgagacctggcctgtat
cattattgcttcatggcaccatatacacattttacacaggcgctagctgatgctagtcta
aggaacatggttcaggctgagcaagaacatgatgcttcagggtggtttgatgtgctgcag
aaagtttctacgcagctgaaaactagtgttaccagtgtaacaaaacatcgtgctgataag
aatgctattcacaatcacattcgtttatttgaaccccttgtcataaaagcattaaaacaa
tacactacaacaacatcagtacagctgcaaagacaagttctagacttacttgctcaactg
gttcagctacgagttaactactgtcttctggattcagatcaggtgtttattggatttgtg
ttaaagcaatttgaatacattgaagtaggacarttcagggagtctgaagctattattccc
aatatcttttttttcctggtattgctgtcttatgagcgatatcattcaaaacagataatt
ggaattcctaagatcattcagctgtgtgatggtatcatggccagtgggaggaaagctgtt
acacatgcaataccagctctgcaacccatcgttcatgatctctttgtgttaagaggaaca
aataaagctgatgctggaaaagagttagaaacacaaaaggaggtggtagtgtcaatgctg
ctgagacttattcagtaccatcaggtgctagaaatgttcatcttagtattgcaacaatgt
cataaagaaaatgaagacaaatggaaaagattgtcccggcaaatagctgacattattctt
ccgatgcttgcaaaacaacagatgcatatagattctcatgatgctttgggagtactgaac
actttgtttgaaattttggctccttcatcccttcgcccggtggacatgcttttaagaagt
atgtttgttactcctaaaacaatggcatcagtgagcactgtccagttatggatttctgga
attttagctatccttagagttctgatttcacaatcaacagaagacatagttctatcccgt
attcaagagctttccttctccccatatttgatttcctgtcaagcaattaacagactgagg
cgtggagaaaataacgtatctgcaccagaggattgcaccgaggttaaacaggcaaaatat
ctgcctgaagagacattttctaggttcttactacaactggttggcattctgctggaagat
attgttaccaaacaattgaaagtggacatgaatgaacagcaacacactttctactgtcag
gagttgggcacactgcttatgtgcttaattcatatcttcaaatcagggatgtttagaaga
atcacagctgcagccaccaggctttttacaggagatggatctgatggtagtttttatacc
cttgaaagtttgagtgatcttgttcagtccatgattcccacgcatccttctttagttctt
ctctggtgtcaaatcctacttcttgtcaattacaccaactacaactggtggtcagaagtg
catcaaactccaaagagacacagtctttctactactaaattgcttagccctcagatatct
ggagacagtgatgaatcggatttggaatctaaacgtggcatgtgcaatcgagagatagtg
agaagaggcgcactcattctcttttgtgattatgtttgtcaaaacctgcatgattcggaa
cacttgacctggcttattgtgaaccatgttcaagacttgattaatctgtcccatgagcct
ccagtacaagactttattagtgctgttcacaggaattctgcagccagtggtctctttatc
caggccattcaatcacggtgtgagaatcttgcagcgcccacaattcttaagaagacttta
cagtgcttagaggggatacatctcagccagtcgggggctgtcttaacattgtatgttgat
aagcttctgtgtactcccttccgtgtgctggctcgtatggtagacacgctggcttgtcgt
cgagtagaaatgcttttggctgcaactttacagaacagcattactcagttaccagttgaa
gaactagacagaattcaggaataccttcaaaacagtggattagcaacaagacaccaaaga
ctttactcgctcttggacaggtttcgtcttatggtagcaccagacacgactagcccttca
cctctggttacctcacatccactagatggagaaaaccagccacctctagagaatgtaatt
ctagacaaagactggtatgtgtcactagtgagatcgcagtgttgcatcaagtccgactca
gcactgctagaaggtgcagagctggtaaataggattcctgagcctgaactgaactccttc
atggccagcaaggaattcaacctaagcttgctagctccttgtttaagccttggtatgaat
gaaatctcaagagatcagaagagcagcttctttgaaacagcccggagagtaactctggat
cacgtgtctaccattgtacaaaaccttcctgccacccaccaagttttccagccgttgttg
ctaactgagccatcagcctactggaaaaagctaagcgatatcttcggagatgaggtgatg
tatcagtctgtgatgacactttgtcgtgcactggctcagtatttgttgttactcacaaaa
ctaccagctggtctccgcgttccccctgacaaagagcgtgacatcctgaaattcatagtt
atgtcagtagaggcagtatcatggcaattaatacatgaccagattccactaagtatagat
cttcaggctgctctggattgttgctgtctgacattacagcagcctaatctctggaatttg
ctggcttctgcagttaatgtgacatatgcttgctccttaattaattgcattagatttata
atagaagcagttgcagttgaacctggaaatcagcttcttagtccagaaagaaagaagaat
acttcaaaaggcctaagtgagggtgaagctgattcaaacacacagagaacaaaacacatt
gctgcagcttgtgaaatggtagccgaaatggtagaatgtttacagactgtcttggcattg
ggacataaaagaaacagcagtattccagcgttccttactcctgtcctcaagaacatcatc
atcagtttggcaaggctacctctagtgaacagttacacaagagtacctcccttggtctgg
aaattaggctggtcaccaaagcctgcaggtgactttggcacagtttttcctgaaatccca
gtagagtttcttcaagaaaaagaaatctttaaagagttcatctatcggattaatacactt
ggrtggattagccgtacccagtttgaagagacttgggctactttgcttggtgtacttgta
actcagcctattgtaatggaccaagaagagaaccagcaagaggaagatacagagaggacc
caaattaatgttcttgcagtacaagccataacttccttggtgctgagcgcaatgacaata
cctgttgcaggcaatccagcagttagctgtttggaacagcagccccgcaacaaagcttta
aaagctctggacacaaggtttgggaggaagctaagtgttatcaggggaattgttgaacag
gaaatccaagcaatggtatctaagagagataatattgctactcatcatttatatcaagct
tgggaccctgttccatcactttctcctgctactacaggtgctcttatcagccacgaaaaa
ctcttactgcagatcaatactgaacgagaaataggagatatggattataaactgggacag
gtctctatacactccatatggttaggaaataatatcactccattgagagaagaagagtgg
ggtgaggatgaagaagatgagaatgacatgcctgctccttcctcaccaccaacctctcct
attaacaccaggaaacaccgggctggtgtagatatccattcttgttctcagttcttgctt
gagctgtatagtcagtggatattgccatcaaatcctagcaagagaacaccagtcattttg
attagcgaagtggtgcgatcacttctggcagtgtcagacttatttacagaaaggaatcag
tttgagatgatgtacacaacactgacagaactgcgaaaggtgcatccatcagaagatgag
atccttgtacagtatttgataccagccacttgtaaggcggctgctgttcttggaatggat
aaagctgtggctgaaccagtaagtcgactgttggagtcaacgctacggagcacccatatg
ccaagtcggattggagctctgcatggaattctgtatattcttgagtgtgacttgcttgat
gaaacagcgaagcagctcattccaattatcagcgagtatctgctctccaatttgagagga
gtagcacattgtgtgaatgtccataaccaacagcatatcttagtaatgtgtgcagctgca
ttctatttgatagagaattatccacttgatgtagggcctgaattctctgcaggaattata
cagatgtgtggagtcatggtatctggcagtgatgaatcaacaccatccattatttatcat
tgtgtcctgagagggctggaacgactccttctttcagagcaactttctaggctggatagt
gaatcactagttaaactaagtgttgaccgagtgaatgtacagagtccccacagagcgatg
gcagcacttgggttaatgctgacttgcatgtacacaggaaaggaaaaaatcagccccagt
cgtaccacagatgcaaatcctgctgctcctgacagtgaatctgtgattgtagctatggaa
cgagtatctgtcctttttgataggatcaggaaaggatttccttttgaagctagagtagtt
gcccggatccttccacaattccttgatgactttttccccccacaagatgtaatgaataaa
gttattggagaattcttatccaatcagcagccttacccacagttcatggcaacagtagtt
tataaggtatttcagacactgcataccactgggcagtcttcaatggtccgtgactgggtg
atgctgtctctctctaatttcacacaaagaacacccgtggcaatggcaatgtggagtctt
tcctgtttttttgtcagtgcttctaccagtcagtggatttcagcgattcttccacatatt
atcagcagaatgggaaaatcggagcaagtggatattaacatcttctgtttggtggccata
gacttctaccgacatcagatagatgaagaattagatcggagggcctttcagtcagtgttt
gaggtagtagcatctccaggaaccccgtatcatcgcctactgacttgtttgcaaaatgtc
cacaagatcacggcctgttga
DBGET
integrated database retrieval system
