Dromaius novaehollandiae (emu): 112996628 Help Entry 112996628         CDS       T07572                                  Symbol SCAF8 Name (RefSeq) protein SCAF8 isoform X1   KO K13191   RNA-binding protein 16 Organism dne  Dromaius novaehollandiae (emu) Brite KEGG Orthology (KO) [BR:dne00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dne03021]     112996628 (SCAF8)    03041 Spliceosome [BR:dne03041]     112996628 (SCAF8) Transcription machinery [BR:dne03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      112996628 (SCAF8) Spliceosome [BR:dne03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     112996628 (SCAF8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CID RRM_1 RRM_occluded Motif Other DBs NCBI-GeneID:  112996628 NCBI-ProteinID:  XP_025978028 Ensembl:  ENSDNVG00000006346 LinkDB All DBs Position Unknown AA seq 1369 aa AA seqDB search MGLVQCSRITHLFCHIPSPLMLNLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSV EKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDK SKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVT PANVVQSLPDPWVSQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALD AGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQSEEPKKETPTS QLPLVPESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENPEGNFGSEHSASP SQGSSQQQFLEVETNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKSAVRSRSRTRSRS RSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPP IRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAY RALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLDGFAE GGMIDQETVNTEWETARSSEAAKENIQTTQSTSVDKSTVITTQTEAYTQPVTMLQIPVAP AVPAVSLVPPAFPVTMSVPPPGYSAIPPPPFLRASFNPSQPPPGFMPPPVPPVPPPVVPP PVVPPVVPTPLVQPPLPITQEAMKDVPFTSLVLPVGTVSSNIATPTLSTGSVFNPLPSSK AESDEKGSHLTDLQISSSENSRSVQNDVSSSSGLVGGVQPPSVSSSSGLTGEGQPPSVSS NSGIAGGVQPPNVSSSSGLVGGVQPPTVTSSPGLTGGVQLPSVSSTSSLTGGVQPTSVSN SSGLMAGVPQPNVSSSSGLLAGVHPPSVSSSPGLLTGMQPPIVSSSSGLLAGVQPPSVSS SSGLLIMPPPNVSSSSGLMGVPPPNISNSSGLLAMQHPAGVQNMPHLNISNQRMPGMPIL DIRPGLMPHSPGPRFPLMQPGIPPQRSIPPPAILDPSLHPPPRGPFPPGDIFNQTERPFG TPGRQNIDSIANSEKRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSPVDIRDSVGRPPI DPREGIGRPPVDGREHFARPHVDMRENFGRPGIDNLGRREHFGFNSEKHWGQRGDYDERE HHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPNWNRGFEQDAHRDFDDRRRPWERQRDR DDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETE SQPPAVQVQDDPELYEKLTSSSEINKEKSDTEADIESEPVVESTETEGT NT seq 4110 nt NT seq  +upstreamnt  +downstreamnt atgggacttgttcagtgttcccgaatcactcaccttttctgccacattccttctcctctc atgttaaatttgtactcgctaaatgattacaagccacctatttccaaagctaaaatgaca cagatcaccaaggcagcaatcaaggctataaagttctacaaacacgttgtgcagagtgtt gagaaattcattcagaagtgcaaaccagaatacaaggtgcctggtctctatgtcattgac tccattgtgagacagtcccgacatcagtttgggcaagaaaaggatgtgtttgctccaaga tttagcaataacatcatcagcactttccagaacttgtatcgttgccctggggatgacaag agtaaaattgttagagtgctaaatttatggcagaagaataatgtgtttaagagtgaaatt attcagcctctcttggatatggcagcaggaattcctcctccagttgtgaccccagtcttg cccagcactacagctgctatgagcaacaatacaccaggaacacctgtgactccagttact ccagccaatgtggtgcagagtttacctgatccttgggtatctcaaattgctaatacagat acacttgctgctgtagcacaaattttacaaagtccccaaggccagcagcttcagcagtta atacagacactgcagatacaacagcagaaacctcagccttcactacttcaagccctggat gctggtcttgttgttcagttacaggccctcactgcacagcttacagctgctgctgctgct gccaacacacttaatccactggaacagagtgtctcttttaataagaagctgatggacagg tttgactttggggaagaatctgaacaaagtgaagagcctaaaaaggaaactcccacttcc caactgcctttagtaccagaatctgtgaacaactcactttttcatcaactagctgaacaa ctacagcaacaaaacttggaacatctcagacaacagcttctggagcaacagcagcctcaa aaggcaagccctgaggaaaatccggagggaaattttggctcagagcactctgcatcacct tcgcaagggagtagtcaacagcagtttttagaagtggaaacaaatgtagatgattcaatg gatattcagcaacaggacatggatatagatgaaggacaagatgtggctgaagaggagatt tttgaacaagaagaaaagaaatcagctgttcgttcaagatcaagaacacgttcaagatct cgttcaaggtcaccaagaaaacgaaggtctagatcaagatctggttctcgtaagcgtaaa cacagaaaacgttcacgctcaagatcgagagaaaggaagagaaagtcatctcggtcatac tccagtgaaagaagggctagggaaagggaaaaggaacgtcagaaaaagggattacctcct atacggtcaaaaacactaagtgtttgcagtactactctttgggtaggtcaagtagacaag aaggctacacagcaggatttaaccaatttgtttgaagaatttggacaaatagaatctatt aatatgattcccccaagaggttgtgcttatgtctgcatggttcatagacaagatgcatat cgtgctcttcagaaacttagttctgggtcctataaaattggatctaaaattattaagatt gcctgggctttaaataaaggtgtgaaaacggagtacaagcagttctgggatgtggatctg ggagtttcgtatatcccttgggagaaagtaaaattggatgatttggatggctttgctgaa ggtggtatgattgaccaggagacagtaaatactgaatgggaaacagccagaagctcagaa gctgctaaagaaaatattcaaactacgcagagtacttcagttgataagagcacagttatt acaacgcagacagaagcttacacgcaaccagtcactatgctgcagattccggtagctcca gctgtgcctgctgttagcttagttccacctgcgtttcctgtcacgatgtctgtccctcct cctggttatagcgcaattcctcctccacctttcttgcgagcaagtttcaacccgtcacag ccccctccaggttttatgcctccgccagttccacctgtcccaccacctgttgtcccgcca cctgttgtcccaccggtagttccaacacctttagtacagcctccattaccaattacgcaa gaggcgatgaaagatgttccttttactagccttgttctaccagttggcacagttagtagc aatatagccactccaacgttatctactggaagcgtttttaatcctcttccaagcagcaaa gcagaatcagatgaaaaaggctcacatcttacagaccttcagatttcttccagtgaaaac agtagatctgtgcaaaatgatgtctcgagtagctctggacttgttggaggagtgcagcca cccagcgtttcaagcagttctgggcttaccggagaagggcagccacccagtgtctcaagt aactctggaattgcagggggagtacaaccaccaaatgtctcaagcagctctggacttgtg ggaggagtacaaccaccaactgttacaagcagtcctggtcttacaggaggagtgcagcta cccagcgtctccagtacctcttctcttacaggaggagttcagccaaccagcgtctcaaat agctctggacttatggctggagtgccacaaccaaatgtctcaagtagctcagggcttcta gctggagtgcatccacccagtgtctcgagcagccctgggcttttgacgggaatgcagcca cctattgtctcaagcagttcaggacttctggcaggagtgcagccgcccagtgtctcaagc agctctgggcttctcataatgccaccacccaatgtttcaagtagttctggacttatggga gtgccaccaccaaatatttcaaatagttctggacttctggcaatgcagcatccagctggg gttcaaaatatgcctcatttaaatattagcaatcaaaggatgccgggaatgcctatttta gatatccgtccaggcctaatgccccattcacctggaccaagatttccattaatgcaacct ggaatacctccgcagcgcagtattcctcctccagcaatccttgatccatctcttcaccca ccacctcgaggtccttttcccccaggagatatttttaatcaaacagaaagaccttttgga acaccaggaagacaaaatattgatagcattgctaattcagagaaaagactcccgcttgga ggcgataacattcaacaggaaggagacagagattatcgctttcctccagtagaaaacaga gataatcttaacagaccatccccagtggacattagagattctgttggacgaccacctatt gatccaagagagggtataggaagacctccagtggatggaagagaacattttgcaagacca catgtagacatgagagagaattttggaagaccaggtatagataatcttggtcgaagggag cattttggtttcaattcagagaagcactggggacagagaggagattacgatgaaagagag caccatgccttccctatttatggtggtcctaaaggcttccatgaagacagagagaggttt cggcatgtaaactataggtttgacagtagaagtggtcccaattggaatagaggatttgaa caagatgctcacagagattttgatgaccgcagaagaccctgggaaagacagagggataga gatgacagagattttaatttttgccgagaaattaatggaaacaggtttggaagagacaga atgtcaaacaactggatcccccctccgcatccaagggtttttgaatattttgatggggcc acttcgcaacgcaaagctgataatatgccccaggtaaatggtgaaaatacagagacagaa agtcagccaccagctgtgcaggtgcaggacgatccagaactttatgaaaaactgacatct tccagcgagataaacaaagagaagagtgacacagaagctgatatagaaagtgaaccagtg gtagaaagcacagaaactgaggggacataa

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