KEGG   Dromaius novaehollandiae (emu): 112997246
Entry
112997246         CDS       T07572                                 
Symbol
SYMPK
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
dne  Dromaius novaehollandiae (emu)
Pathway
dne03015  mRNA surveillance pathway
dne04530  Tight junction
Brite
KEGG Orthology (KO) [BR:dne00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    112997246 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112997246 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dne03021]
    112997246 (SYMPK)
   03019 Messenger RNA biogenesis [BR:dne03019]
    112997246 (SYMPK)
Transcription machinery [BR:dne03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     112997246 (SYMPK)
Messenger RNA biogenesis [BR:dne03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     112997246 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     112997246 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N
Other DBs
NCBI-GeneID: 112997246
NCBI-ProteinID: XP_025978932
Ensembl: ENSDNVG00000011247
LinkDB
Position
Unknown
AA seq 1027 aa
VDAGRLAAAQRSPVLRSADSPGGGGGGGGGNRAGRGESAPRRGTRGVARPSRGAAGSRVS
PLLSGQVVDLLNQAALISNDSKINILKQGPPGALTPRAASQWMVKSKVISELQEACWEMV
SAMASDIILLLDSDNDGIRTHAIKFVEGLIITLSPRMPDSDVPKRHENDISLERIPKDHP
YIKYNVLWEEGKAALEQLLKFMVHPAISSINLTAALGSLATIARQRPMFMAEVIQAYETL
HANLPPTLAKSQVSSVRKNLKLHLLSVLRHPSSGDFQPQITTLLVDLGTQQAEIARSMPN
PRDVRKRPRDEPDAALKKMKIEPPLGEDDEDKDLEQVAVPAPKASGQGSAQSDTDITAEF
LQPLLTPENVANLVLISMVYLPETMPASFQATYTPVESAGTEAQIKHLSRLMATQMTAAG
LGPGVEQTKHLKEEPKEEKTAKPESVVIKRRLSALSQGQAISVLGAQGSAANPLEEEAPQ
TKRRPEPIIPATQPRRAPQARVKILASLVTQFEVPLKSEVLAFVLDDIRGRLDLAFAWLF
QEYNAYLSRYPSGSLDHYDECLIGLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRK
YCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRQQALLFIKRMYEKDQ
LREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETIKQCLYLYLALLPHNHKL
IHELASVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLT
DKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNR
LLGTQHGEGTSAVSPLNPGELLIALHNIDSSKCDMKSIIKATNLCFAERNVYTSEVLAVV
MQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQR
TKPQSFQVVLQLPPPQLAAVFEKCPELREPLLAHVRSFTPHQQAHVPLSTMAILEASAKQ
EPEAKDP
NT seq 3083 nt   +upstreamnt  +downstreamnt
gtggacgccggccgtctggccgccgcacagaggagccctgttctccgctccgccgattcc
cccggcggcggtggcggcggtgggggggggaaccgggccgggaggggggaatcggcaccc
cggcgagggacccgcggggtggcccggccgtcccggggtgccgcgggctcacgcgtctcc
cctctcctctccgggcaggtcgtggatctcctcaaccaagccgccttgatcagcaacgac
tccaaaattaacatcctcaagcagggcccccccggggcgttgacgccccgtgccgcctcg
cagtggatggtgaagtccaaggtgatcagcgagctgcaggaggcctgctgggagatggtg
tcggccatggccagcgacatcatcctcctcctcgactcggacaacgacggcatccgcacg
cacgccatcaagttcgtcgagggcctcatcatcaccctgtcgccccgcatgcccgactcg
gacgtgcccaagcgccacgagaacgacatcagcctggagcgcatccccaaggatcacccc
tacattaagtacaacgtgctgtgggaggagggcaaggccgccctggagcagctcctcaag
ttcatggtgcacccggccatctccagcatcaacctcacggcggccctgggctccctggcc
accatcgcccgccagcggcccatgttcatggcggaggtgatccaggcctacgagaccctt
cacgcgaacctgccgcccaccctggccaagtcgcaggtgagcagcgtgcgcaagaacctc
aagctgcacctgctgagcgtcctgcggcacccgtcctcgggcgacttccagccccagatc
accaccctcctggtggacctgggcacccagcaggccgagatcgcccgcagcatgcccaac
ccccgcgacgtccgcaagcggccccgcgacgagcccgacgccgccctcaagaagatgaag
atcgagccaccgctgggcgaggacgacgaggacaaggacctggagcaggtggcggtgccg
gcgcccaaagcgtccggccagggcagcgcccagtcggacacggacatcacggccgagttc
ctgcagcccctgctgacgcccgagaacgtcgccaacctggtgctcatcagcatggtgtac
ctgcccgagaccatgcccgcctccttccaagccacctacacccccgtggagtcggccggc
accgaggcgcagatcaagcacctctcccggctcatggccacgcagatgacggcagcgggg
ctcggcccgggcgtggagcaaacgaagcacctcaaggaagagccgaaggaggagaaaacg
gccaagccggagagcgtggtgatcaaacggcgcctctcggccctgtcccaaggccaggcc
atctccgtgctgggcgcccagggctccgccgccaacccgctggaggaggaagccccgcag
accaagcggcgccccgagcccatcatccccgccacgcagccccgccgggccccgcaggcc
cgcgtgaagatcctggcctccctggtgacgcagttcgaggtgccgctgaagagcgaggtg
ttggccttcgtgctcgacgacatccggggccgcctggacctggctttcgcctggctcttc
caggagtacaacgcctacctgagccgctacccctccggcagcctcgaccactacgacgag
tgcctcatcggcctcctctccggcctgcaggagaaaccggaycaaaaagacgggattttc
accaaggtggtgctggaggcgccgctgatcaccgagagcgccctggaagtcatccggaaa
tactgcgaggacgagagccgcacctacctgggcatgtccacgctgcgcgacctcatcttc
aagagaccttccaggcagttccagtacctgcacgtcctcctcgacctcagctcccacgag
aaggacaaggttcgtcagcaggccttgctcttcatcaagcgcatgtacgagaaggaccag
ctgagggaatacgtggagaaattcgccctcaactacctgcagctcctggtgcaccccaac
ccgccgtcggtgctcttcggggccgacaaggacacggaggtggccgctccctggacggag
gagaccatcaagcagtgcctgtacctctacctggccctgctgccgcacaaccacaagctc
atccacgagctggcctccgtgtacaccgaggccatcgccgacatcaagcgcaccgtcctg
cgggtcattgagcagccgatccgcggcatgggcatgaactcccccgagctcctgctgctg
gtggagaactgtcccaagggagccgagacgctggtgacgcgctgcctccacagcctcacg
gataaagtgcccccctcgccggagctggtgaaacgcgtccgcgacctctatcacaagagg
ctgccggacgtgcggttcctcatccccgtcctcaacggcctggagaagaaagaggtgatc
caggctctgcccaagctcatcaagctgaaccccatcgtggtgaaggaggttttcaaccgc
ctgctgggcacgcagcacggtgagggcacctcggccgtgtccccgctgaaccccggcgag
ctgctcatcgccctgcacaacatcgactcctccaagtgcgacatgaaatccatcatcaaa
gccaccaacctgtgcttcgccgagaggaacgtctacacctcggaggtgctggcrgtggtg
atgcagcagctgatggagcagagcccgctgcccatgctgctcatgcgcaccgtcatccag
tcgctcaccatgtacccccgcctcggcggcttcgtcatgaacatcctctcccgcctcatc
atgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatcaagtgctgccagcgc
acgaagccgcagtcgttccaggtggtgctgcagctgccgccgccgcagctggccgccgtc
ttcgagaagtgcccggagctgcgcgagccgctgctcgcccacgtccgctccttcaccccc
caccagcaagcgcacgtgccgctctccaccatggccatcctggaggccagcgccaagcag
gagcccgaggccaaggacccgca

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