Dromaius novaehollandiae (emu): 112997246
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Entry
112997246 CDS
T07572
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
dne
Dromaius novaehollandiae (emu)
Pathway
dne03015
mRNA surveillance pathway
dne04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112997246 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112997246 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dne03021
]
112997246 (SYMPK)
03019 Messenger RNA biogenesis [BR:
dne03019
]
112997246 (SYMPK)
Transcription machinery [BR:
dne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112997246 (SYMPK)
Messenger RNA biogenesis [BR:
dne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112997246 (SYMPK)
U7-dependent histone pre-mRNA processing factors
112997246 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
112997246
NCBI-ProteinID:
XP_025978932
Ensembl:
ENSDNVG00000011247
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
VDAGRLAAAQRSPVLRSADSPGGGGGGGGGNRAGRGESAPRRGTRGVARPSRGAAGSRVS
PLLSGQVVDLLNQAALISNDSKINILKQGPPGALTPRAASQWMVKSKVISELQEACWEMV
SAMASDIILLLDSDNDGIRTHAIKFVEGLIITLSPRMPDSDVPKRHENDISLERIPKDHP
YIKYNVLWEEGKAALEQLLKFMVHPAISSINLTAALGSLATIARQRPMFMAEVIQAYETL
HANLPPTLAKSQVSSVRKNLKLHLLSVLRHPSSGDFQPQITTLLVDLGTQQAEIARSMPN
PRDVRKRPRDEPDAALKKMKIEPPLGEDDEDKDLEQVAVPAPKASGQGSAQSDTDITAEF
LQPLLTPENVANLVLISMVYLPETMPASFQATYTPVESAGTEAQIKHLSRLMATQMTAAG
LGPGVEQTKHLKEEPKEEKTAKPESVVIKRRLSALSQGQAISVLGAQGSAANPLEEEAPQ
TKRRPEPIIPATQPRRAPQARVKILASLVTQFEVPLKSEVLAFVLDDIRGRLDLAFAWLF
QEYNAYLSRYPSGSLDHYDECLIGLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRK
YCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRQQALLFIKRMYEKDQ
LREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETIKQCLYLYLALLPHNHKL
IHELASVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLT
DKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNR
LLGTQHGEGTSAVSPLNPGELLIALHNIDSSKCDMKSIIKATNLCFAERNVYTSEVLAVV
MQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQR
TKPQSFQVVLQLPPPQLAAVFEKCPELREPLLAHVRSFTPHQQAHVPLSTMAILEASAKQ
EPEAKDP
NT seq
3083 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccggccgtctggccgccgcacagaggagccctgttctccgctccgccgattcc
cccggcggcggtggcggcggtgggggggggaaccgggccgggaggggggaatcggcaccc
cggcgagggacccgcggggtggcccggccgtcccggggtgccgcgggctcacgcgtctcc
cctctcctctccgggcaggtcgtggatctcctcaaccaagccgccttgatcagcaacgac
tccaaaattaacatcctcaagcagggcccccccggggcgttgacgccccgtgccgcctcg
cagtggatggtgaagtccaaggtgatcagcgagctgcaggaggcctgctgggagatggtg
tcggccatggccagcgacatcatcctcctcctcgactcggacaacgacggcatccgcacg
cacgccatcaagttcgtcgagggcctcatcatcaccctgtcgccccgcatgcccgactcg
gacgtgcccaagcgccacgagaacgacatcagcctggagcgcatccccaaggatcacccc
tacattaagtacaacgtgctgtgggaggagggcaaggccgccctggagcagctcctcaag
ttcatggtgcacccggccatctccagcatcaacctcacggcggccctgggctccctggcc
accatcgcccgccagcggcccatgttcatggcggaggtgatccaggcctacgagaccctt
cacgcgaacctgccgcccaccctggccaagtcgcaggtgagcagcgtgcgcaagaacctc
aagctgcacctgctgagcgtcctgcggcacccgtcctcgggcgacttccagccccagatc
accaccctcctggtggacctgggcacccagcaggccgagatcgcccgcagcatgcccaac
ccccgcgacgtccgcaagcggccccgcgacgagcccgacgccgccctcaagaagatgaag
atcgagccaccgctgggcgaggacgacgaggacaaggacctggagcaggtggcggtgccg
gcgcccaaagcgtccggccagggcagcgcccagtcggacacggacatcacggccgagttc
ctgcagcccctgctgacgcccgagaacgtcgccaacctggtgctcatcagcatggtgtac
ctgcccgagaccatgcccgcctccttccaagccacctacacccccgtggagtcggccggc
accgaggcgcagatcaagcacctctcccggctcatggccacgcagatgacggcagcgggg
ctcggcccgggcgtggagcaaacgaagcacctcaaggaagagccgaaggaggagaaaacg
gccaagccggagagcgtggtgatcaaacggcgcctctcggccctgtcccaaggccaggcc
atctccgtgctgggcgcccagggctccgccgccaacccgctggaggaggaagccccgcag
accaagcggcgccccgagcccatcatccccgccacgcagccccgccgggccccgcaggcc
cgcgtgaagatcctggcctccctggtgacgcagttcgaggtgccgctgaagagcgaggtg
ttggccttcgtgctcgacgacatccggggccgcctggacctggctttcgcctggctcttc
caggagtacaacgcctacctgagccgctacccctccggcagcctcgaccactacgacgag
tgcctcatcggcctcctctccggcctgcaggagaaaccggaycaaaaagacgggattttc
accaaggtggtgctggaggcgccgctgatcaccgagagcgccctggaagtcatccggaaa
tactgcgaggacgagagccgcacctacctgggcatgtccacgctgcgcgacctcatcttc
aagagaccttccaggcagttccagtacctgcacgtcctcctcgacctcagctcccacgag
aaggacaaggttcgtcagcaggccttgctcttcatcaagcgcatgtacgagaaggaccag
ctgagggaatacgtggagaaattcgccctcaactacctgcagctcctggtgcaccccaac
ccgccgtcggtgctcttcggggccgacaaggacacggaggtggccgctccctggacggag
gagaccatcaagcagtgcctgtacctctacctggccctgctgccgcacaaccacaagctc
atccacgagctggcctccgtgtacaccgaggccatcgccgacatcaagcgcaccgtcctg
cgggtcattgagcagccgatccgcggcatgggcatgaactcccccgagctcctgctgctg
gtggagaactgtcccaagggagccgagacgctggtgacgcgctgcctccacagcctcacg
gataaagtgcccccctcgccggagctggtgaaacgcgtccgcgacctctatcacaagagg
ctgccggacgtgcggttcctcatccccgtcctcaacggcctggagaagaaagaggtgatc
caggctctgcccaagctcatcaagctgaaccccatcgtggtgaaggaggttttcaaccgc
ctgctgggcacgcagcacggtgagggcacctcggccgtgtccccgctgaaccccggcgag
ctgctcatcgccctgcacaacatcgactcctccaagtgcgacatgaaatccatcatcaaa
gccaccaacctgtgcttcgccgagaggaacgtctacacctcggaggtgctggcrgtggtg
atgcagcagctgatggagcagagcccgctgcccatgctgctcatgcgcaccgtcatccag
tcgctcaccatgtacccccgcctcggcggcttcgtcatgaacatcctctcccgcctcatc
atgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatcaagtgctgccagcgc
acgaagccgcagtcgttccaggtggtgctgcagctgccgccgccgcagctggccgccgtc
ttcgagaagtgcccggagctgcgcgagccgctgctcgcccacgtccgctccttcaccccc
caccagcaagcgcacgtgccgctctccaccatggccatcctggaggccagcgccaagcag
gagcccgaggccaaggacccgca
DBGET
integrated database retrieval system