Dermacoccus nishinomiyaensis: HX89_00695
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Entry
HX89_00695 CDS
T03223
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dni
Dermacoccus nishinomiyaensis
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dni03032
]
HX89_00695
03400 DNA repair and recombination proteins [BR:
dni03400
]
HX89_00695
Enzymes [BR:
dni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HX89_00695
DNA replication proteins [BR:
dni03032
]
Prokaryotic type
DNA Topoisomerases
HX89_00695
DNA repair and recombination proteins [BR:
dni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HX89_00695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AIF39763
UniProt:
A0A075JIN2
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All DBs
Position
135833..137974
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AA seq
713 aa
AA seq
DB search
MADKPSDDSIDPTRQDPSLVDAADGASEQVEQHVRSQIDTEYDADAIQVLEGLEAVRKRP
GMYIGSTGERGLHHLVWEIVDNSVDEALAGHATRVDVTILPDNGIRVSDNGRGIPTGRNE
AYDMSTVELVLTQLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTRLEAEVRQKGHVYRME
FAGGVPLGELREEEESDETGTTITFWASPEIFETTVYDFETIRARFQQMAFLNKGLTISL
TDERPDAVDEGAAEEAAADAAAEGADAAQADEAAAQAKKGKSVTYCYADGLLDYVKHLNS
SKRAEVVNEDIIAFEHEDAERYLSVEVAMQWTTAYSESVHTYANTINTHEGGTHEEGFRA
AMTKLVNDFARREKLLKEKDDNLTGDDIREGLTAVISVKLAEPQFEGQTKTKLGNSEVKG
FVQTAVRDEFDHWLQMHPREGKAIVSKAIAAASARMAARKARETARRKGLLESGGLPGKL
RDCQSKDPSISEVFIVEGDSAGGSAVQGRNPFNQAILPIRGKILNVEKARLDKVLANNEV
QGLISGFGTGIGEDFTIEKARYHKIVLMADADVDGMHIRTLLLTLLFRFMRPLIEAGYVY
LAQPPLYRIKWSNHEHEFAFTDRERDAMIDAGQSKGWRLPKENGVQRYKGLGEMNYQELW
ETTMDPESRTLLQVTLEDAAAADEIFAVLMGEDVESRRSFIQRNAKDVRFLDI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaagcccagcgacgactcgatcgacccgacgaggcaggatccctcgctcgta
gacgcagccgacggcgcgtcagagcaggtcgagcagcacgtccggtcccagatcgacacg
gagtacgacgccgacgccatccaggtcctcgagggcctcgaggccgtccgcaagcggccc
ggcatgtacatcggctccacgggtgagcgcggcctgcatcacctcgtgtgggagatcgtc
gacaactcggtcgacgaggccctcgccggtcacgcgacgcgcgtcgacgtgacgatcctg
cccgacaacggcatccgcgtctccgacaacggccgcggcatcccgacgggccgcaacgag
gcgtacgacatgtcgaccgtcgagctcgtcctcacccagctgcacgccggaggcaagttc
ggtggcggcggctacaaggtctccggtggtctgcacggcgtcggcagctcggtcgtcaac
gccctgtcgacgcgcctcgaggccgaggtgcggcagaagggccacgtctaccgaatggag
ttcgcgggcggcgtgccgctcggcgagctgcgtgaggaagaggagagcgacgagaccggc
acgacgatcacgttctgggcgagcccggagatcttcgagacgaccgtctacgacttcgag
acgatccgtgcgcgcttccagcagatggccttcctcaacaagggcctgacgatctccctc
accgatgagcgtcccgacgccgtcgacgagggtgctgcagaggaagctgcggccgacgct
gcagccgagggtgccgacgccgcacaggctgacgaggccgccgcgcaggcgaagaagggc
aagagcgtcacgtactgctacgcggacggtctgctcgactacgtcaagcacctcaactcc
tccaagcgcgccgaggtcgtcaacgaggacatcatcgccttcgagcacgaggacgccgag
cgctacctctcggtcgaggtcgcgatgcagtggacgacggcatacagcgagtccgtccac
acgtacgccaacacgatcaacacgcacgagggcggcacgcacgaagagggtttccgcgcg
gcgatgacgaagctcgtcaacgacttcgcgcgccgcgagaagctgctcaaggagaaggac
gacaacctcaccggtgacgacatccgcgaggggctgacggccgtcatcagcgtcaagctt
gccgaaccacagttcgagggccagacgaagacgaagctcggcaactccgaggtcaagggc
ttcgtccagaccgcggtgcgcgacgagttcgaccactggctgcagatgcacccgcgcgag
ggcaaggcgatcgtcagcaaggccatcgccgccgcgtcggcgcggatggcggcccgcaag
gcgcgcgagaccgcgcgacgcaagggcctgctcgaatcgggtggactgccgggcaagctg
cgcgactgccagagcaaggatccgtcgatctccgaggtgttcatcgtcgagggtgactcg
gccggcggctcggcggtgcaggggcgcaacccgttcaaccaggcgatcctgccgatccgc
ggcaagatcctcaacgtcgagaaggcacgcctcgacaaggtgctcgcgaacaatgaggtg
cagggcctgatctcgggcttcggcacgggcattggcgaggacttcacgatcgagaaggcg
cgctaccacaagatcgtcctcatggccgacgccgacgtcgacggcatgcacatccgcacg
ttgctgctcactctgctgttccgcttcatgcgcccgctcatcgaggccggatacgtctac
ctcgcccagccgccgctttaccgcatcaagtggagcaaccacgagcacgagttcgccttc
accgaccgcgagcgcgacgcgatgatcgacgcaggccagtcgaagggctggcgcctgccg
aaggagaacggcgtccagcgctacaagggtctcggcgagatgaactaccaggaactgtgg
gagaccacgatggacccggagtcgcgcacgttgctccaggtcacgctcgaggatgccgcg
gccgccgacgagatcttcgccgtgctcatgggtgaggacgtcgaatcgcgacgcagcttc
atccaacgcaacgcgaaggacgtcaggttcctcgacatctga
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