Dermacoccus nishinomiyaensis: HX89_01840
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Entry
HX89_01840 CDS
T03223
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dni
Dermacoccus nishinomiyaensis
Pathway
dni00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HX89_01840
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dni01007
]
HX89_01840
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dni03016
]
HX89_01840
Enzymes [BR:
dni01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HX89_01840
Amino acid related enzymes [BR:
dni01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HX89_01840
Transfer RNA biogenesis [BR:
dni03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HX89_01840
Prokaryotic type
HX89_01840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
OVT1
SOGA
SseC
ATG16
Motif
Other DBs
NCBI-ProteinID:
AIF39926
UniProt:
A0A075JCC3
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All DBs
Position
373238..374551
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AA seq
437 aa
AA seq
DB search
MIDIRLLRDNPDAVRASQRARGADEGVVDRILELDATRRSSLGEFERVRAEQKQVSKSVG
AAMGALNKAKKGGDDSQVARLQAEADTARENAATLSARVKELEATADEAGKEFDALLRTV
PNVVLDGVPAGGEDDFVTVKTVGEAPTFDFEPKDHLEIGELIGAIDMERGTKVSGSRFYF
LKGVGARLELALLQMALDQAIANDFTPMITPTLVRPETMQGTGFDVAHDSEIYRVQEEDN
LYLVGTSEVALAGYHADEILNVDAPVRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEM
FSYCRIEDAEAEHARMLAWEEEMLGKCELSYRVIDTAAGDLGTSAARKFDCEAWVPTQGT
YRELTSTSNCTTFQARRLNIRERTDGSTRSVATLNGTLATTRWLVAILETHQQADGSVRV
PEALRTYMGGLEVLPVI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacattcgactgcttcgtgacaaccctgacgccgtccgcgcgagccagcgtgct
cgcggcgctgacgagggcgtcgtcgaccgcattctcgagctcgacgcgacgcgccgcagt
tcgctcggtgagttcgagagggtgcgcgccgagcagaagcaggtgtccaagagcgtcggc
gccgcgatgggtgcgctcaacaaggccaagaagggcggtgacgactcgcaggtcgcgcgt
ctgcaggccgaggccgacaccgcgcgcgagaacgctgcgaccttgagcgcccgcgtcaag
gagctcgaggccactgccgacgaggcgggcaaggagttcgacgcgctgcttcgcaccgtc
cccaacgtcgtcctcgacggcgtgccggcgggtggcgaggacgacttcgtcaccgtcaag
acggtcggtgaggccccgacgttcgacttcgagccgaaggatcacctcgagatcggtgag
ctcatcggcgcgatcgacatggagcgtggcacgaaggtctcgggttcgcgcttctacttc
ctcaagggtgtcggcgcgcgcctcgagctggcgctgctgcagatggcgctcgaccaggcc
atcgcgaacgacttcaccccgatgatcaccccgaccctcgtgcggccggagacgatgcag
ggcaccggcttcgacgtcgcgcacgactccgagatctaccgcgtgcaggaggaggacaac
ctctacctcgtcggcacctcggaggtcgcgctcgccggctaccacgcggacgagatcttg
aacgtcgacgctcccgtgcgctacgccggttggtcgagctgctaccgccgcgaggccggt
tcgtacggcaaggacacgcgcggcatcatccgcgtccaccagttcaacaaggtcgagatg
ttctcctactgccgcatcgaggacgccgaagcggagcacgctcgcatgctcgcgtgggaa
gaggagatgctgggcaagtgcgagctgtcctaccgcgtcatcgacaccgccgccggtgac
ctcggcacgtccgccgcacgcaagttcgactgcgaggcctgggtgccgacgcagggcacc
taccgcgagctgacgtcgacgtcgaactgcacgacgttccaggcgcgccgcctcaacatc
cgtgagcgcaccgacggctcgacgcgttcggtcgcgacgctcaacggcacgctcgcgacg
acgcgttggctcgtcgccatcctcgagacgcaccagcaggccgacggctcggtgcgtgtg
cccgaggcgctgcgcacgtacatgggtggcctcgaggtgctgcccgtcatctga
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