Dermacoccus nishinomiyaensis: HX89_03465
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Entry
HX89_03465 CDS
T03223
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dni
Dermacoccus nishinomiyaensis
Pathway
dni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HX89_03465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dni03400
]
HX89_03465
Enzymes [BR:
dni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HX89_03465
DNA repair and recombination proteins [BR:
dni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HX89_03465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIF40165
UniProt:
A0A075JEM7
LinkDB
All DBs
Position
complement(738425..741862)
Genome browser
AA seq
1145 aa
AA seq
DB search
MALILHREASPTALAEQLGSLLASDPLDVFDRELVIAPSPGVERWLSQRLAHELGSDIGD
DGVCAGLSVHTPYSFMSFALGREFDDPWHPDRLAWLVLEAVDAAVQRPGFETLAHHLGAD
ALSGGASKNDAWFHRARQSRRYAVARRLAGLFARYSDERPALVRAWESGAGGDVPPDLAW
QPRLWRDVLDVARAHGIDESPVTRLDRVSTGLRDGTLTLSLPRRVNFFGYTRVSTATLDL
LEALAARHETHLWLPHPSDALWQRLRQLDSGGLRRRGDDSARAAEHPLLAMLGRDVRELE
LTLLRRDVEDASAPAAAPFGQGPAGEGSSRGAAAGTRLEQLQADIRANRAPSAVSTIDDT
ASFQVHACHGPARQVDALRETLLWLLDESEGRLQPRDIVVMCPDVETYAPLIKAAFASVD
DDGAHHPGRRLRVQLADRGLAATNPLAEVALRLLGLAGGRATASEVLDFAHLPAVREKFG
FDTDALDRISRWVRTSGARWGYDAEHRREYGLLQMPANTWTLALDRLALGVAMSADTEAP
AGALLPIDDLGTSDIETASAFVTLMTEVTAAAKAVRGTSSAGVDLPRGSFTPQEWFDWLR
RHVGAVAAPSRDEAWQLGAFERELAFLAEGSTRTGLRLTDMRVMLEQRWGPRPSRSNFRN
GAVSVCTLTPMRSVPHQAVILLGLDDESFPRSFVVDGDDALARDPHLGERDPRSEDRQLL
LDAVMAARKHLIAFYSGFDERDGTRRPPAVPLQELIAAAAATGAPTPEDAERHPFEFVHP
LQPFDERNFTFRSPLPGGSYDAAALAGARSLRQARESGRAVADEASLPPLLTGLLPAREP
RDVTLDELVRFIENPARTFLSDRLQTGVTYEADETEDALPIDLDPLEQWAVGDRLLRRTL
SGVPLEQASAEESHSGALPPSPLPSKIGDITRKVGAILRGLPPGERRSIDVSIPLPLNGP
SGPTSIRLTGVVPHVIGDEIQIVNYSSVSARHLARAWVSVLAVAASRPGQEWSAAVRGKY
GECRLTAPDDPLGALTDLASLRLDGLRAPLPVPAKTSLAFIEGYRTGRRSRNATEELALN
VGASKALPVWVGTFDREGERDDPWWQRVYAPQVPSLDRLNAGNVFIDRSKRLWMPLLDQK
GPIGR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
gtggcactcatcctgcatcgggaagcttccccgaccgcgctcgccgagcagctcggctcg
ctcctcgcgagcgatccgctcgacgtgttcgaccgtgaactcgtcatcgcgccctccccc
ggcgtcgagcgctggctgagccaacgcctcgcgcacgagctcggctcggacatcggcgac
gacggggtgtgcgccgggctgagcgtccacacgccgtactcgttcatgtcgttcgccctc
gggcgcgagttcgacgacccgtggcaccccgaccggctcgcctggctcgtcctcgaagcc
gtcgacgcggccgtgcagcgccccgggttcgagacgctcgcccaccacctcggggccgat
gcgctgtccggtggcgcgtcgaagaacgacgcgtggttccaccgtgcccgccagtctcgt
cggtacgcggtcgcgcgtcgcctcgcggggctgttcgcgcgctacagcgacgagcgtccc
gcgctcgttcgtgcctgggagagcggtgccggcggcgacgtcccgcccgacctcgcgtgg
cagccccggttgtggcgtgacgtgctcgacgtggcgcgcgcgcacggcatcgacgagtcg
cccgtcacgcggctcgaccgcgtgtccaccggcctgcgcgacggcacgctgacgctgtcc
ctgccgcggcgcgtcaacttcttcggctacacccgggtgtcgacggcgacactcgacctg
ctcgaagcgctcgccgcacgtcacgagacgcatctgtggctgccgcacccgagcgacgcc
ctctggcagcggttgcgccagctcgattccggcggtctccggcgccgcggcgacgacagc
gcgcgcgccgcggagcacccgctgctcgccatgctcgggcgtgacgtccgcgaactcgaa
ctgacgctgctgcgacgcgacgtcgaggacgcgagcgcaccggcggccgccccgttcggt
caggggcctgccggtgagggatcctcgcgcggggctgctgccggcacgcgcctcgagcag
ctgcaggccgacatccgcgccaaccgcgccccgagcgccgtgtcgaccatcgacgacacg
gcctccttccaggttcacgcctgtcacggcccggcccgtcaggtcgacgccctgcgcgag
acgctgctgtggctgctcgacgagtccgagggcaggctgcagccgcgcgacatcgtcgtc
atgtgccccgacgtcgagacgtacgcgccgctcatcaaggcggcgttcgcctccgtcgac
gacgacggcgcgcaccatcccggtcgacgtctgcgcgtgcagctcgccgaccgcggcctc
gccgccaccaaccccctcgccgaggtggccctgcgactgctcggcctcgccggcgggcgc
gccaccgcatccgaggtgctcgacttcgcgcacctgcccgccgtgcgcgagaaattcggt
ttcgacacggacgccctcgaccgcatcagccggtgggtgcgcacgagcggtgcacgttgg
ggttacgacgccgagcaccgccgcgagtacggcctcctccagatgccggccaacacgtgg
acgctggctctcgaccggctcgcactcggcgtcgcgatgagcgccgacaccgaagccccg
gcgggcgccctgctgcccatcgacgacctgggcacctccgacatcgagacggcgagcgcc
ttcgtcaccctcatgacggaggtgacggcggccgccaaggcggtgcgcggcacgagctca
gcgggcgtcgaccttccccggggcagtttcacgccgcaggaatggttcgactggttgcgg
cgtcacgtgggcgccgtcgctgctccgtcgcgcgacgaggcgtggcagctcggggcgttc
gagcgcgagttggcgttcctcgccgaaggcagcacccgcaccggtctgcgtctcaccgac
atgcgcgtcatgctcgagcagcgctggggcccgcgcccgtcgcgcagcaacttccgcaac
ggcgccgtcagcgtgtgcacgctgacgccgatgcgttcggtgccgcaccaggccgtcatc
ctgctcggcctcgacgacgagagcttcccccgctccttcgtcgtcgacggtgacgacgca
ctcgctcgcgaccctcatctcggcgagcgcgacccgcgcagtgaggacagacaattgctt
ctcgacgccgtcatggcggcgcgcaagcacctcatcgcgttctactcgggcttcgacgag
cgtgacggcactcgccgcccgcccgccgtcccgctgcaggagctcatcgccgcggccgcc
gcgaccggcgcgccgacccccgaggacgccgagcgtcaccccttcgagttcgtccacccg
ctgcaaccgttcgacgaacgcaacttcacgttcaggtcacccctgccgggtggctcgtac
gacgcggccgcgctcgccggcgcgcgttcgttgcggcaggcgcgtgagagcggacgcgcc
gtcgccgacgaggcctcgctgccgccgctgctcaccggcctgctgccggcccgcgaaccc
cgtgacgtcaccctcgacgagctcgtgaggttcatcgagaacccggcccgcacgttcctg
tccgaccggctgcagacgggcgtcacgtacgaggccgacgagaccgaggatgcgctaccg
atcgacctcgacccgctcgagcagtgggccgtcggcgatcgcctcctgcgtcgcaccctc
agcggggtgccgctggagcaggcgagcgccgaggagagccacagtggcgcgttgccaccg
agcccgctgccgtcgaagatcggcgacatcacgcgcaaggtcggcgccatccttcggggc
ctgccgccgggtgagcgacgcagtatcgacgtgtcgatccccctcccgctcaacggaccg
agcgggccgacctccatccggctgacgggtgtcgtcccgcacgtcatcggcgacgagatc
cagatcgtcaactacagctccgtcagtgctcggcacctcgcgcgggcctgggtgagcgtc
ctcgcggtcgccgcctcccgtcccgggcaggagtggagcgccgccgtgcgcggcaagtac
ggcgagtgccgcctcaccgcacccgatgacccgctcggcgcgctcaccgacctcgcgtcc
ctgcgcctcgacggtctgcgcgcgcccctgccggtgccggcgaagacgtcgctcgcgttc
atcgagggctaccgcaccgggcgacgctcgcgcaacgccaccgaagaactcgccctcaac
gtcggggcgagcaaggcgctcccggtctgggtgggcacgttcgatcgcgaaggtgaacgc
gacgacccctggtggcagcgcgtttacgcgccacaggtgccctcactcgaccggctcaat
gccggcaacgtgttcatcgaccggagcaaacggctgtggatgccgctgctcgaccagaag
ggaccgatcgggcgatga
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