Dermacoccus nishinomiyaensis: HX89_06535
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Entry
HX89_06535 CDS
T03223
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dni
Dermacoccus nishinomiyaensis
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dni03016
]
HX89_06535
Enzymes [BR:
dni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HX89_06535
Transfer RNA biogenesis [BR:
dni03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HX89_06535
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIF40652
UniProt:
A0A075JH98
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All DBs
Position
complement(1397319..1398698)
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AA seq
459 aa
AA seq
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MNDTPTSRPAAHRDETPSARRASGEPVSARSSSSESPEPQETPAYPLLEAPADGVPDVIT
TAAQLKECCAAIRAGHGPVAIDAERASGFRYGNDAYLVQLRREGSGTWLIDPVPLNDLSS
LNAAIGSAEWVLHAATQDLPCLKALGLRPRKLFDTELGSRLAGLPRVGLAAVTEHFVGVT
LAKEHSAVDWSTRPLPHDWLVYAALDVERLVEVRDALAADLEAQGKAEWARQEFEALLDF
EGPAPKKEPWRRTSGLHALRDLRQLARVRALWQTREDIAQRRDTTPGRVLPDALIIDLAR
RNPHDTSGLVGPPAIRPRVGDGSARRRRPRPAHRGLARYGERWLAALKAADALPNRELPT
ATQRTSAPPPIRAWHDKNPAAAGRLDDVRYGLQRFSDERRVPVENLVTPDLLRRVIWSPP
ADTSEDGWRAALSAGGARPWQCDIVAPLLAEAALDHPSR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacacccccacctcacgacccgcggcgcaccgcgacgagaccccgtcagcgcga
cgagcgagcggcgagccggtgtcggcccgctcgtcctcgagtgaatccccggaaccgcag
gaaacgcccgcgtaccccctccttgaagcaccggcggacggcgtcccggacgtcatcacg
accgctgcacagctcaaggagtgctgcgctgccattcgtgctggccacggcccggtcgcc
atcgacgccgagcgcgcctcgggtttccgctacggcaacgacgcctatctggtgcagttg
cgccgcgagggctcgggtacgtggctcatcgacccggtcccgctcaacgatctgagcagt
ctcaacgccgcgatcggcagtgcggagtgggtgctgcacgccgcgactcaggatctgccg
tgcctcaaggccctcggtctgcgcccgcgcaagctgttcgacaccgaactcggctcacgt
ctcgcgggtctgccacgcgtcggcctcgccgccgtcaccgagcacttcgtcggtgtgacg
ctcgcgaaggagcactctgcggtcgactggtcgacgcgcccgctgccgcacgattggctc
gtctatgcggcgctcgacgtcgagcggctcgtcgaggtgcgtgacgcgctcgccgccgac
ctcgaggcgcagggcaaggccgagtgggcgcgtcaggagttcgaggcactgctcgacttc
gagggcccggcgccgaagaaggagccgtggcgacgcacgtccggcctgcacgccctgcgt
gacctgcgtcagctcgcccgcgttcgcgccctgtggcagacgcgtgaggacatcgcgcaa
cgtcgcgacacgacgccagggcgcgtcctgcccgacgccctcatcatcgacctcgcacga
cgcaacccgcacgacacctccggtctcgtcggcccgcccgccatccgcccgcgcgtcggt
gacggttccgcgcggcgccgccgcccgcgtcctgcgcaccggggtctcgcgcgctacggc
gagcgttggctcgcggcgctgaaggccgccgacgccctgccgaaccgcgagctgccgacg
gcgacgcagcgaacctcggctcccccgccgatccgtgcgtggcatgacaagaacccggca
gcggccgggcgtctcgacgacgtccggtacgggctgcagcgcttcagcgacgagcgtcgc
gtacccgtcgagaatctcgtgacgcccgacctgctgcgccgcgtcatctggtcaccgccc
gccgacacgagcgaggacggctggcgcgcggcgctgagcgccggcggagcccgcccatgg
cagtgcgacatcgtcgctccgctgctcgccgaggcggctctcgaccacccgtcgcgctga
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