KEGG   Dermacoccus nishinomiyaensis: HX89_06535
Entry
HX89_06535        CDS       T03223                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
dni  Dermacoccus nishinomiyaensis
Brite
KEGG Orthology (KO) [BR:dni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dni03016]
    HX89_06535
Enzymes [BR:dni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     HX89_06535
Transfer RNA biogenesis [BR:dni03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    HX89_06535
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: AIF40652
UniProt: A0A075JH98
LinkDB
Position
complement(1397319..1398698)
AA seq 459 aa
MNDTPTSRPAAHRDETPSARRASGEPVSARSSSSESPEPQETPAYPLLEAPADGVPDVIT
TAAQLKECCAAIRAGHGPVAIDAERASGFRYGNDAYLVQLRREGSGTWLIDPVPLNDLSS
LNAAIGSAEWVLHAATQDLPCLKALGLRPRKLFDTELGSRLAGLPRVGLAAVTEHFVGVT
LAKEHSAVDWSTRPLPHDWLVYAALDVERLVEVRDALAADLEAQGKAEWARQEFEALLDF
EGPAPKKEPWRRTSGLHALRDLRQLARVRALWQTREDIAQRRDTTPGRVLPDALIIDLAR
RNPHDTSGLVGPPAIRPRVGDGSARRRRPRPAHRGLARYGERWLAALKAADALPNRELPT
ATQRTSAPPPIRAWHDKNPAAAGRLDDVRYGLQRFSDERRVPVENLVTPDLLRRVIWSPP
ADTSEDGWRAALSAGGARPWQCDIVAPLLAEAALDHPSR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaacgacacccccacctcacgacccgcggcgcaccgcgacgagaccccgtcagcgcga
cgagcgagcggcgagccggtgtcggcccgctcgtcctcgagtgaatccccggaaccgcag
gaaacgcccgcgtaccccctccttgaagcaccggcggacggcgtcccggacgtcatcacg
accgctgcacagctcaaggagtgctgcgctgccattcgtgctggccacggcccggtcgcc
atcgacgccgagcgcgcctcgggtttccgctacggcaacgacgcctatctggtgcagttg
cgccgcgagggctcgggtacgtggctcatcgacccggtcccgctcaacgatctgagcagt
ctcaacgccgcgatcggcagtgcggagtgggtgctgcacgccgcgactcaggatctgccg
tgcctcaaggccctcggtctgcgcccgcgcaagctgttcgacaccgaactcggctcacgt
ctcgcgggtctgccacgcgtcggcctcgccgccgtcaccgagcacttcgtcggtgtgacg
ctcgcgaaggagcactctgcggtcgactggtcgacgcgcccgctgccgcacgattggctc
gtctatgcggcgctcgacgtcgagcggctcgtcgaggtgcgtgacgcgctcgccgccgac
ctcgaggcgcagggcaaggccgagtgggcgcgtcaggagttcgaggcactgctcgacttc
gagggcccggcgccgaagaaggagccgtggcgacgcacgtccggcctgcacgccctgcgt
gacctgcgtcagctcgcccgcgttcgcgccctgtggcagacgcgtgaggacatcgcgcaa
cgtcgcgacacgacgccagggcgcgtcctgcccgacgccctcatcatcgacctcgcacga
cgcaacccgcacgacacctccggtctcgtcggcccgcccgccatccgcccgcgcgtcggt
gacggttccgcgcggcgccgccgcccgcgtcctgcgcaccggggtctcgcgcgctacggc
gagcgttggctcgcggcgctgaaggccgccgacgccctgccgaaccgcgagctgccgacg
gcgacgcagcgaacctcggctcccccgccgatccgtgcgtggcatgacaagaacccggca
gcggccgggcgtctcgacgacgtccggtacgggctgcagcgcttcagcgacgagcgtcgc
gtacccgtcgagaatctcgtgacgcccgacctgctgcgccgcgtcatctggtcaccgccc
gccgacacgagcgaggacggctggcgcgcggcgctgagcgccggcggagcccgcccatgg
cagtgcgacatcgtcgctccgctgctcgccgaggcggctctcgaccacccgtcgcgctga

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