KEGG   Dermacoccus nishinomiyaensis: HX89_06820
Entry
HX89_06820        CDS       T03223                                 
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
dni  Dermacoccus nishinomiyaensis
Pathway
dni03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HX89_06820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dni03400]
    HX89_06820
Enzymes [BR:dni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HX89_06820
DNA repair and recombination proteins [BR:dni03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HX89_06820
    RecFOR pathway proteins
     HX89_06820
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 TIP49 Mg_chelatase Sigma54_activat AAA_14 nSTAND3 RNA_helicase NIR_SIR_ferr AAA_3 Parvo_NS1 IstB_IS21
Other DBs
NCBI-ProteinID: AIF40695
UniProt: A0A075JFX4
LinkDB
Position
1452365..1453459
AA seq 364 aa
MSPSHFEDHSADVSPRLVDPNGTEDEQQLEAALRPKKLADFPGQPRVREQLSLVIEAARR
RATPPDHILFSGPPGLGKTSLAMIVASELEAPIRITSGPAIQHAGDLAAILSSLNEGEVL
FLDEIHRMARPAEEMLYLAMEDFRVDVIVGKGPGATAIPLELPRFTVVGATTRAGLLPAP
LRDRFGFTGHLDYYDAADLADILARNADLLGVPATREGITEIAGRSRGTPRIANRLLRRV
RDYAQVHGRHVVDLTSARAALELFDVDDDGLDRLDRAVLEALCRRFGGGPVGLSTLAVAV
GEEPDTVETVAEPYLVREGYMIRTPRGRAASPRAWTHLGLRPPDGHFTETFQRDTDDGGG
RFTG
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgagcccgtcccacttcgaggaccacagcgccgacgtctcgccgcgcctcgtcgacccc
aacggcaccgaggacgagcagcagctcgaagcggccctgcgaccgaagaagctggccgat
ttccccgggcagccacgcgtgcgcgagcagttgagcctcgtcatcgaggcggcccggcgc
cgagcgacgccgcccgaccacatcctgttctccggcccgcccggcctgggcaagacgtcg
ctcgcgatgatcgtcgcgagtgagctcgaggcgcccatccgcatcacgagcggccctgcc
atccagcacgccggtgacctggccgccatcctgagctcgctcaacgagggggaggtgctc
ttcctcgacgagatccaccgcatggcccgccccgcggaggagatgctctacctcgcgatg
gaggacttccgggtcgacgtcatcgtcggcaagggcccaggggccaccgcgatccccctc
gaactgccgcgcttcaccgtcgtcggtgcgacgacgcgcgccggtctgctgccggcgcca
ctgcgcgaccgcttcggcttcaccggccatctcgactactacgacgcggccgacctcgcc
gacatcctcgcccgcaacgccgacctgctcggcgtaccagcgacgcgtgagggcatcacc
gagatcgccggccgctcccgcggcacgccgcgcatcgccaaccggctgctgcgccgcgtg
cgtgactacgcgcaggtgcacgggcgccacgtcgtcgacctgacgtccgcgcgtgccgcg
ctcgagctgttcgacgtcgacgacgacggcctcgatcgcctcgaccgcgcggtgctcgaa
gccctgtgccgacgcttcgggggtgggccggtcgggctgtccacgttggccgtcgccgtc
ggtgaagaacccgacacggtcgagacggtggccgagccgtatctcgtgcgcgagggctac
atgatccgcacgccgcgtgggcgcgccgcgtcaccgcgggcgtggacgcacctcgggctg
cgcccgccggacgggcacttcaccgagacatttcagcgcgacaccgacgacgggggcgga
cgtttcaccgggtag

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