Dermacoccus nishinomiyaensis: HX89_07420
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Entry
HX89_07420 CDS
T03223
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dni
Dermacoccus nishinomiyaensis
Pathway
dni00730
Thiamine metabolism
dni01100
Metabolic pathways
dni01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HX89_07420
Enzymes [BR:
dni01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HX89_07420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIF40796
UniProt:
A0A075JEW6
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All DBs
Position
1582131..1583996
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AA seq
621 aa
AA seq
DB search
MTTFNSRDLAATTDRAATSPASAPVQTRATTPADGSDARRKQYRDADGLRVPYTEVILDN
SPGTGAANAPVELYDTSGPGSDPEVGLSPLRAEWIAARDDVETYAGRERTLLDDGRSAVR
RGEASHEWRGERRAPLRSKDGAVVTQMHYARKGLITPEMRFVAARENCAVELVRDEVAAG
RAIIPANVNHPESEPMIIGRRFLVKVNANIGNSAVTSSIAEEVDKLTWATTWGADTVMDL
STGDDIHTTREWIIRNSPVPIGTVPIYQALEKVNGEADKLTWEIFRDTVIEQCEQGVDYM
TIHAGVLLRYVPMTAERITGIVSRGGSIMAGWCLAHHEENFLYTHFDELCEIFARYDVAF
SLGDGLRPGCTADANDEAQLSELRTLAELTKRAWRFDVQVMVEGPGHVPLDLVEENVRLQ
QEWCDGAPFYTLGPLVTDVAPGYDHITSAIGATTIAMGGTAMLCYVTPKEHLGLPNRDDV
KTGVITYKLAAHAADVAKRHPGARAWDDALSKARFEFRWNDQFNLSLDPDTAREFHDESL
PAEAAKTAHFCSMCGPKFCSMRISQDVRDRFGDAGAQQRVVSESEAREGMQQMSKTFVEL
GRSVYVEPDTADALATPTPQD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgttcaactcccgcgacctcgcggccaccaccgaccgagcagccacgtcgccg
gcgtcggcccccgttcagacgcgcgcaaccacccccgctgacggatcggacgctcgccgc
aagcagtaccgcgacgcggacggcctgcgcgtgccctacaccgaggtcatcctcgacaac
tcccccggcaccggcgcggccaacgctcccgtcgagctgtacgacacctccggcccgggc
agtgaccccgaggtcgggttgtcgccccttcgcgccgagtggatcgccgcacgggacgac
gtcgagacgtacgccggccgagagcgcaccctgctcgacgacggccgttcggccgtccga
cgcggtgaggcgagccacgagtggcgcggtgaacgtcgcgcaccgctgcgctccaaggac
ggtgccgtcgtcacccagatgcattacgcccgcaagggattgatcacccccgagatgcga
ttcgtcgccgcgcgcgagaactgcgccgtcgaactagtgcgcgacgaggtcgccgccgga
cgcgcgatcatccccgccaacgtcaaccacccggagagcgagccgatgatcatcgggcgt
cgcttcctcgtcaaggtcaacgcgaacatcggaaactcggccgtgacgtcgtcgatcgcc
gaggaggtcgacaagctgacgtgggcgacgacgtggggcgccgacaccgtcatggacctg
tcgaccggtgacgacatccacacgacgcgcgagtggatcatccgcaactcccccgtcccg
atcggcaccgtgccgatctaccaggccctcgagaaggtcaacggtgaggccgacaagctg
acgtgggagatcttccgcgacaccgtcatcgagcagtgcgagcagggcgtcgactacatg
acgatccacgccggcgtgctgctgcgctacgtgccgatgacggccgagcgcatcacgggc
atcgtcagccgcggcggctcgatcatggccggctggtgtctcgcgcaccacgaggagaac
ttcctctacacccacttcgacgagctgtgcgagatcttcgcccgctacgacgtcgccttc
tccctcggtgatggcctgcgccccggctgcaccgccgacgccaacgacgaggcgcagctt
tccgagctgcgcaccctcgccgagctgacgaagcgggcatggcggttcgacgtccaggtc
atggtcgagggccccgggcacgtgccgctcgacctcgtcgaggagaacgtgcgcctgcag
caggagtggtgtgacggcgcgccgttctacacgctcggcccgctcgtcaccgacgtcgca
cccggctacgaccacatcacttccgcaatcggcgcgacgacgatcgcgatgggtggcacc
gcgatgctgtgctacgtcacgccgaaggagcacctcgggctgccgaaccgtgatgacgtc
aagaccggcgtcatcacgtacaagctcgcggcgcacgccgccgacgtcgcgaagcgccac
cccggcgcgcgggcgtgggatgacgcgttgagcaaggcgcgcttcgagttccgttggaac
gaccagttcaacctgtcgctcgaccccgacaccgcgcgcgagttccacgacgaatcgctg
cccgccgaggcggcgaagacggcacacttctgctcgatgtgcgggccgaagttctgctcg
atgcgcatcagccaggacgtgcgcgaccgcttcggtgacgccggcgcccagcagcgcgtc
gtcagcgagagcgaggcccgtgagggcatgcagcagatgtcgaagacgttcgtcgagctc
ggacgcagcgtctacgtcgaacccgacaccgccgacgccttggcaacccccacgccccag
gactga
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