Dermacoccus nishinomiyaensis: HX89_08110
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Entry
HX89_08110 CDS
T03223
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dni
Dermacoccus nishinomiyaensis
Pathway
dni03030
DNA replication
dni03410
Base excision repair
dni03420
Nucleotide excision repair
dni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HX89_08110
03410 Base excision repair
HX89_08110
03420 Nucleotide excision repair
HX89_08110
03440 Homologous recombination
HX89_08110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dni03032
]
HX89_08110
03400 DNA repair and recombination proteins [BR:
dni03400
]
HX89_08110
Enzymes [BR:
dni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HX89_08110
DNA replication proteins [BR:
dni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HX89_08110
DNA repair and recombination proteins [BR:
dni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HX89_08110
NER (nucleotide excision repair)
GGR (global genome repair) factors
HX89_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AIF40909
UniProt:
A0A075JG87
LinkDB
All DBs
Position
complement(1738270..1740939)
Genome browser
AA seq
889 aa
AA seq
DB search
MKRLLLLDGHSLAYRAFFALPAENFSTSTGQHTNAVYGFTSMLINLLRDEEPTHLAVAFD
VSRQTFRSEEYAEYKAGRATTPSEFKGQVNLVKEVLDAMGVTHLELDGYEADDILATLTT
QATQAGFDEVLLCSGDRDALQLVRDNVTVLYPVKGVSELTRMTPAAVEEKYGVPPERYSD
LAALVGEKSDNLPGVPGVGPKTAAKWIGQYGDLEGLVANVDQIKGKAGENVRAHLDGVLR
NRRLNQLLVDVPLPVTPDDLARHDWNRDEVHRVFDGLEFKVLRDRLFATLGTAQPEAEGD
VSVDGVVLGDGEVETWLAGITGRAGLFVDGTWAKGAGDASGLAIADESGRAAYVDLTTLA
PEDEQALAEWLADVTKAKALHDAKGPMHALAARGLTLAGLTNDTAIAAYLVRPDQRSYGF
EDLLLRYCHIELPETGKQAAGQGMLDLGDVGATQGDDAMARAAAVATLAAALDEAVADVG
GIELMAELELPIVEVLATMEQAGIAVDLDALHELEADYDAQVVAAQQDAWDAIGGEQVNL
GSPKQLQVVLFETLGLPKTKKTKTGYTTDAEAIADLSEKAPHPFLDALLRHRDASKLRST
VQGLIKSIGDDGRIHTTYQQTIAATGRLSSTDPNLQNIPIRTESGRRIRRVFVVGEGYDC
LMSADYSQIEMRVMAHLSGDEGLIQAFNDGEDLHRFVGSRVFGVEPSEVTSEMRAKVKAM
SYGLAYGLSAFGLSKQLRISTAEAQRLMDGYFERFGGVRDYLRQIVDDARATGYTETMMG
RRRYLPDLTSDNRQRRDMAERMALNAPIQGSAADIMKKAMLGVDEALRAANLRSRVLLQV
HDELIVEVGAGERDEVERIVREQMGAAADLAVPLDVNVGTGRSWQDAEH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcttgttgttgttggacggacattccctcgcctaccgggccttcttcgcgctg
cccgcggagaatttctcgacctcgacggggcagcacacgaacgccgtgtacggcttcacg
tcgatgctcatcaacctgctgcgcgacgaggaaccgacgcacctcgccgtcgcgttcgat
gtgtcgcgtcagacgttccgcagcgaggagtacgccgagtacaaggcgggccgtgcgacg
acgcccagcgagttcaaggggcaggtgaacctcgtcaaggaggtgctcgacgcgatgggc
gtcacgcacctcgaactcgacgggtacgaggccgacgacatcctcgcgacactcaccacc
caggcgacgcaggccggtttcgacgaggtgctcctgtgctccggcgaccgcgacgcgctg
cagctcgtgcgcgacaacgtcactgtgctgtaccccgtcaagggcgtctcggagctgacg
cgcatgacgcccgccgccgtcgaggagaagtacggcgtgccgcccgagcgctacagcgac
ctcgccgcgctcgtcggcgagaagagcgacaacctgccgggcgtgcccggtgtcggcccc
aagacggccgcgaagtggatcgggcagtacggcgacctcgagggcctcgtcgccaacgtc
gaccagatcaagggcaaggccggcgagaacgtgcgcgcccacctcgacggcgtgctgcgc
aaccgacgcctcaaccagctgctcgtcgacgtgccgctgccggtgacgccggacgacctc
gcgcgccacgactggaaccgtgacgaggtgcaccgcgtcttcgacggtctcgagttcaag
gtgctgcgcgaccgcctgttcgcgacgctcggcacggcgcagcccgaggcggagggcgac
gtcagcgtcgacggcgtcgtgctcggcgacggcgaggtcgagacgtggctcgccggtatc
accgggcgcgccgggctgttcgtcgacggcacgtgggcgaagggcgcgggtgacgcgagc
ggcctggcgatcgccgacgagagcggccgcgccgcgtacgtcgacctgacgaccctcgca
cccgaggacgagcaggcgcttgccgagtggctcgccgacgtgacgaaggcgaaggccctg
catgacgcgaagggcccgatgcacgccctcgccgcgcgcggtctcaccctcgcagggctg
acgaacgacaccgccatcgcggcctacctcgtgcgacccgaccagcgctcgtacgggttc
gaggatctgctgctgcgctactgccacatcgaactgcccgagaccggcaagcaggcagcc
ggtcaggggatgctcgacctcggtgacgtcggcgctacgcagggggacgacgccatggcg
cgcgccgcggccgtcgcgaccctggccgccgcgctcgacgaggcggtcgccgacgtcggt
ggcatcgagctcatggccgagctcgagctgccgatcgtcgaggtgctcgcgacgatggag
caggcaggcatcgccgtcgacctcgacgcgctgcacgaactcgaagccgactacgacgcg
caggtcgtcgccgcgcagcaggacgcgtgggacgcgatcggtggcgagcaggtcaacctc
ggctcgccgaagcagttgcaggtcgtgctgttcgagaccctgggcctgccgaagaccaag
aagacgaagacggggtacacgacggacgccgaggcgatcgccgacctgtcggagaaggcg
ccgcacccgttcctcgacgctctgcttcgtcaccgtgacgcctcgaagctgcgctcgacg
gtgcagggcctcatcaagtcgatcggtgacgacggccgcatccacaccacctaccagcag
acgattgcggcgaccgggcgtctcagctcgaccgacccgaacctgcagaacatcccgatc
cgcaccgaatcgggtcgacgcatccgtcgtgtcttcgtggtcggcgagggctacgactgc
ctcatgtccgccgactacagccagatcgagatgcgagtcatggcgcacctgtccggcgac
gagggcctcatccaggccttcaacgacggcgaggacctgcaccggttcgtcggctcacgc
gtgttcggcgtcgagccgagcgaggtgacctccgagatgcgcgcgaaggtcaaggcgatg
tcgtacggcctcgcgtacgggctgtcggcgttcggcctgagcaagcagctgcgcatctcc
acggccgaggcgcagcgcctcatggacggctacttcgaacgcttcggtggggtgcgcgac
tacctgcgtcagatcgtcgacgacgcgcgcgcgaccggctacaccgagacgatgatgggt
cggcgccgctacctgcccgacctgacgagcgacaaccgtcagcgccgcgacatggccgag
cggatggcgctcaacgcgccgatccagggctcggcggccgacatcatgaagaaggccatg
ctcggcgtcgacgaggcgttgcgcgcggcgaacctgcgctcgcgggtgctcctgcaggtg
catgacgaactcatcgtcgaggtcggcgcgggcgaacgcgacgaagtcgaacgcatcgtg
cgcgagcagatgggtgcggccgccgacctcgcggtgccgctcgacgtcaacgtcggcacc
ggacgcagctggcaggacgccgagcactga
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integrated database retrieval system
