Dermacoccus nishinomiyaensis: HX89_10855
Help
Entry
HX89_10855 CDS
T03223
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dni
Dermacoccus nishinomiyaensis
Pathway
dni03420
Nucleotide excision repair
dni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HX89_10855
03430 Mismatch repair
HX89_10855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dni03400
]
HX89_10855
Enzymes [BR:
dni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HX89_10855
DNA repair and recombination proteins [BR:
dni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HX89_10855
MMR (mismatch excision repair)
Other MMR factors
HX89_10855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_30
Viral_helicase1
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIF41356
UniProt:
A0A075JGL9
LinkDB
All DBs
Position
complement(2325099..2327795)
Genome browser
AA seq
898 aa
AA seq
DB search
MSGLFDDLPLTAADASRPSSRSGTDAWPSRTPSTEAPAGAAAVDPGAVDASGIPLWALQE
PPPDEAPADAGTWGDDAPMLGRGSHWGRPDSGRGTRRFEADPASLLEGMNPQQAQAVEHF
GTPLLIVAGAGSGKTRVLTHRIAYLMAARGAQPGQILAITFTNKAAAEMRERVEQLVGGA
ANAMWVSTFHSACVRILRREAKHVGLRSTFSIYDAADSQRLMAMVTRDLDLDPKRYPPKS
FSFQVSNLKNELIDAEEAAKRAETDQERKVAEAYRLYQQRLRQANALDFDDIIMTTVTIL
QAFPQVAEHYRRRFRHILVDEYQDTNHAQYVLVRELAGGEHASGGMASQDAEGDSRATSA
VPMADLCVVGDADQSIYAFRGATIRNIVEFEEDYPNATTILLEQNYRSTQNILGAANSVI
ERNPERRKKNLWSDQGDGEKIVGYVADSEHDEAAFVARTIDKLGDDHGVKPKDVAVFYRT
NAQSRALEEVFVRVGLPYKVVGGTRFYERKEIKDALAYLRVISNPADTVNLRRILNTPKR
GIGDRAEACLGALAERERISFIEALARADEAPGIATRSVSAVKGFTEILESLRQTRESGS
GVGPLIEAILERTGYLKELRTSKDPQDETRIENLAELVAVANEFDDNYPGATLEDFLEQV
SLVADADEIPKDAEDQGVVTLMTLHTAKGLEFPVVFLTGMEDGTFPHMRALGDTKELEEE
RRLAYVGITRARERLHLSRAAVRSAWGAPQYNPPSRFLGEIPEEFVHWEREATAFASSQP
RGYAAFGGGGGSRYGSGGSRHDDDGPVIGRGSAPVARMSSSGRSSGAGSFSTTKSSAVGR
GMREIPNLDAGDKVTHDSFGLGTVVRVEGQGDRAMAHIDFGDGPPKRLLLRYAPVTKL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcctcttcgacgaccttccgctgaccgctgccgacgcctcccgtccctcctcc
aggagcggtaccgacgcgtggccgtcgcgtaccccgagcacggaggctcccgccggggcc
gccgcagtcgatccgggggcggtcgacgcgtccggcatcccgttgtgggccctgcaggaa
ccgccgcccgacgaggcccccgccgacgccggcacatggggcgacgacgcgccgatgctg
ggtcgcggatcgcactggggtcgccccgattcgggccgcggcacgcgacgtttcgaggcc
gatcctgcgagcctgctcgagggcatgaacccgcagcaggcgcaggccgtcgagcacttc
gggacgccgttgctcatcgtcgcgggcgccggttcgggcaagacgcgcgtgctgacgcac
cgcatcgcctacctgatggcggcgcgtggcgcacagcccggccagatcctcgcgatcacc
ttcacgaacaaggcggccgccgagatgcgtgagcgcgtcgagcagctcgtcgggggtgcg
gcgaacgcgatgtgggtgagcacgttccactccgcgtgcgtgcgcatcctgcgccgtgaa
gccaagcacgtggggttgcgctcgacgttctcgatctacgacgcggccgacagtcagcgc
ctcatggcgatggtgacgcgcgatctcgacctcgatccgaagcgctacccgccgaagtcg
ttcagtttccaggtgagcaacctgaagaacgagctgatcgacgccgaggaggccgcgaag
cgcgccgagacggatcaggagcgcaaggtcgccgaggcctaccgtctctaccagcagcgc
ctgcgtcaggcgaacgcgctcgacttcgacgacatcatcatgacgaccgtcaccatcctg
caggcgttcccgcaggtggccgagcactaccggcgccgcttccggcacatcctcgtcgac
gaataccaggacacgaaccacgcgcagtacgttctcgtgcgcgagctcgccggcggtgag
cacgcctcgggcggcatggcgagccaggacgccgagggcgattcgcgcgccacgagcgcg
gtacccatggccgacctgtgcgtcgtcggtgacgccgatcagtcgatctacgccttccgt
ggggcgacgatccgcaacatcgtcgagttcgaggaggactacccgaacgcgacgacgatc
ctgctcgagcagaactaccgttcgacgcagaacatcctcggcgcggcgaactccgtcatc
gagcgcaacccggagcgtcgcaagaagaacctgtggtccgatcagggcgacggcgagaag
atcgtcgggtacgtcgccgattccgagcatgacgaggccgcgttcgtcgcgcgcacgatc
gacaagctcggcgacgatcacggcgtcaagcccaaggacgtcgcggtgttctaccggacg
aacgcgcaatcgcgcgcgctcgaagaggtgttcgtccgtgtcggcctgccgtacaaggtc
gtcggtggcacgcggttctacgagcgcaaggagatcaaggacgcgctcgcatacctgcgc
gtcatctcgaacccggccgacaccgtcaacctgcgccgcatcctcaacacgccgaagcgc
ggcatcggtgaccgcgccgaggcatgcctcggcgcgctcgcggagcgggagcgcatctcg
ttcatcgaggcgctcgcgcgggccgacgaggcgccgggcatcgcgacgcggtcggtgagc
gccgtcaagggcttcaccgagatcctcgagagcctgcggcagacgcgcgagtccggtagc
ggcgtcggccccctcatcgaggcgatcctcgagcgcacggggtatctgaaggagctgcgc
acgagcaaggatcctcaggacgagacgcgcatcgagaacctcgccgagctcgtcgccgtc
gccaacgagttcgacgacaactacccgggcgcgacgctcgaggacttcctcgagcaggtc
tccctcgtggccgacgcggacgagataccgaaggacgccgaggatcagggcgtcgtcacc
ctcatgacgttgcacaccgcgaagggcctcgagtttccggtcgtattcctcaccggcatg
gaggacggcaccttcccacacatgcgcgctctcggcgacacgaaggagctcgaggaggag
cggcgcctcgcctacgtcggcatcacccgggcgcgcgagcgcctgcacctgtcacgcgct
gccgtgcgcagcgcatggggtgcgccgcagtacaacccgccgtcgcgcttcctcggcgag
atcccggaggagttcgtccactgggagcgcgaggccacggcgttcgcgtcgtcccagccg
cgcgggtacgccgcgttcggcggcgggggcggttcgcgctacggctcgggtggcagcagg
cacgacgatgacggccccgtcatcgggcgcggctccgcgccggtggcgcggatgtcgtcg
agcggtcgcagctccggggccggttcgttctcgaccacgaagagctccgccgtcggccgc
ggcatgcgcgagatcccgaacctcgacgccggcgacaaggtgacgcacgacagcttcggc
ctcggcaccgtcgtgcgcgtcgagggtcagggcgaccgagcgatggctcacatcgacttc
ggcgacggcccacccaagcgcctgctcctgcgctacgcgcccgtcacgaagctgtga
DBGET
integrated database retrieval system
