KEGG   Dermacoccus nishinomiyaensis: HX89_12715
Entry
HX89_12715        CDS       T03223                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
dni  Dermacoccus nishinomiyaensis
Brite
KEGG Orthology (KO) [BR:dni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dni03032]
    HX89_12715
   03400 DNA repair and recombination proteins [BR:dni03400]
    HX89_12715
Enzymes [BR:dni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     HX89_12715
DNA replication proteins [BR:dni03032]
 Prokaryotic type
  DNA Topoisomerases
   HX89_12715
DNA repair and recombination proteins [BR:dni03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HX89_12715
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: AIF41648
UniProt: A0A075JNF5
LinkDB
Position
complement(2710341..2713163)
AA seq 940 aa
MASGKKLVIVESPSKGNKIASYLGSDYVVDASVGHIRDLPTPSEMPADMKKGPYGKFAVD
VDNGFAPYYVVDANKKKKVAELKRALKDADELYLATDEDREGEAIAWHLLETLKPKVPVK
RMVFHEVTKEAIQRAVNDTRELDMQMVNAQETRRILDRLYGYEVSPVLWRKVRAGLSAGR
VQSVATRMVVERERERMAFRAASYWDVEGEFEAKSSQAFTAKLTGVDGERVASGRDFGDD
GRLKSSGVRHLDGAAAEKIAEATRAGHAEVSAVSEKPYSRKPSAPFITSTLQQEASRKLR
LGSKDTMRVAQRLYENGYITYMRTDSVALSEQAISAARQQARDLYGAEYVPDAPRRYAGK
SKNAQEAHEAIRPAGDRFRTPAQVAGELRGTEFALYELIWKRTVASQMADAKGSTASVKV
AVGIESSGIAKRAEYSASGTVITFRGFLAAYEEGRDADRYSNDDGERRLPKLSEGVGLDV
LRAEALGHETSPPARYTEATLTKALEERGIGRPSTYAATVGTIQDRGYVRTRGSALIPTW
LAFAVTNLLETHFPSLVDYDFTASMEEGLDRIAAGDEERAAWLTRFYFGDEGESAEGLKQ
LVDDLGDIDARGISTIPIGEGLVVRVGRYGPYVEEEVPNGIDPATGEVKEGFDPEKVGEK
PRRASITDDIAPDEMTPAKIRELLDASDDDGRVLGTDPESGHEIVAKSGRYGPYVTEVLP
EVTPADGEKPKKKAAKPKPRTASLFKDMDLATIELDTALKLLSLPRVVGVVEEKATAEDG
TETTKQVEITAQNGRYGPYLKKGTDSRSLENEAQLFTITLEEAEAIYAQPKQRGRAAAKP
PLKEFGADPTSGKPVVVKDGRFGEYVTDGETNATLRKDDDVETLTAERAYELLAEKRAKG
PSTRKKAAKKSTKKAATKKTAAKKTTTKKTAAKKTTAKKA
NT seq 2823 nt   +upstreamnt  +downstreamnt
gtggcgtcaggcaagaaactcgtcatcgtcgaatcgccctcgaagggcaacaagatcgcg
tcttatctgggcagcgactacgtcgtcgatgccagcgtcgggcacatccgtgacctgccg
acgccgagcgagatgccggccgacatgaagaagggcccgtacggcaagttcgccgtcgac
gtcgacaacggtttcgcgccgtactacgtcgtcgacgcgaacaagaagaagaaggtcgcc
gagctcaagcgcgctctgaaggacgccgacgagctctacctcgccaccgatgaggaccgc
gagggcgaggccatcgcgtggcacctgctcgagacgctgaagccgaaggtgccggtcaag
cgcatggtcttccacgaggtgacgaaggaagccatccagcgcgccgtcaatgacacgcgc
gagctcgacatgcagatggtcaacgcgcaggagacgcgccgcatcctcgaccgtctctat
ggctacgaggtgtcgccggtgctgtggcgcaaggtgcgtgcgggcctgtcggcagggcgt
gtgcagtcggtcgcgacgcgcatggtcgtcgagcgtgagcgggagcgcatggcgttccgc
gccgcgtcgtactgggacgtcgagggcgagttcgaggcgaagtcgagccaggcgttcacc
gccaagctgacgggcgtcgacggcgagcgggtcgcctccggccgcgacttcggcgacgac
gggcgcctcaagagctcgggcgtgcgccacctcgacggtgcggcggccgagaagatcgct
gaggcgacgcgagccggccacgccgaggtcagtgccgtcagcgagaagccgtactcgcgc
aagccgagcgcgccgttcatcacctcgacgctgcagcaggaggccagccgcaagctgcgt
ctgggctcgaaggacacgatgcgcgtcgcgcagcgcctgtacgagaacggctacatcacg
tacatgcgtaccgactcggtggccctgtccgagcaggccatcagcgccgcgcgtcagcag
gcgcgcgacctgtacggcgccgaatacgtgccggacgctccccgccgttacgcgggcaag
tcgaagaacgcgcaggaggcgcacgaggcgatccgcccggccggtgatcgcttccgcacg
cccgcccaggtcgccggtgagctgcgcggcaccgagttcgcgttgtacgagctgatctgg
aagcgcaccgtcgcctcgcagatggcggacgcgaagggttcgacggcgtcggtcaaggtc
gccgtcggcatcgagagctcgggtatcgccaagcgcgccgagtactcggcgagcggcacc
gtcatcacattccggggctttctcgccgcctacgaggagggccgcgacgccgatcgttac
tcgaacgatgacggcgaacgtcgcctgcccaagctgtccgagggtgtcggcctcgacgtg
ctgcgcgccgaggcgttggggcacgagacgtcgccgcccgcgcgttacaccgaggcgacg
ctgacgaaggcactcgaggagcgcggcatcggccgcccgtcgacgtacgccgcgacggtc
ggcacgatccaggatcgcgggtatgtgcgaacgcgcggcagcgcgctcatcccgacatgg
ctcgcgttcgcggtgacgaacctgctcgagacgcacttccccagcctcgtcgactacgac
ttcaccgcctcgatggaggaggggctcgaccgcatcgccgccggtgacgaggagcgcgcg
gcctggctcacgcgcttctacttcggcgacgagggtgagtcggccgagggcctcaagcaa
ctcgtcgacgacctcggcgacatcgacgcacgcggaatctccaccattccgatcggcgag
ggtctcgtcgtgcgcgtcgggcggtacgggccgtacgtcgaggaggaggtgccgaacggc
atcgatccggcgacgggtgaggtcaaggagggcttcgaccccgagaaggtcggcgagaag
ccgcggcgcgcgtcgatcacggacgacatcgcgcccgacgagatgacgcctgcgaagatc
cgcgagctgctcgacgcctccgacgacgacggccgcgtcctcggcaccgaccccgagtcg
ggccacgagatcgtcgccaagtcgggacgctacggcccgtacgtcaccgaggtgctgccg
gaggtgacgcctgccgacggtgagaagccgaagaagaaggcggcgaagccgaagccgcgc
acggcgtcgctgttcaaggacatggatctcgcgacgatcgagctcgacaccgccctcaag
ctgctatcgctgccgcgcgtcgtcggcgtcgtcgaagagaaggcgacggccgaagacggc
acggagacgacgaagcaggtcgagatcaccgcgcagaacgggcgctacgggccgtacctg
aagaagggcaccgactcgcgctcgctcgagaacgaggcgcagctgttcacgatcacgctc
gaggaggccgaggcgatctacgcccagccgaagcaacgtggccgcgccgccgcgaagccg
ccgctcaaggagttcggcgccgacccgacgtccggcaagcccgtcgtcgtcaaggacggc
cgcttcggcgagtacgtcaccgacggcgagaccaacgcgacgctgcgcaaggacgacgac
gtcgagacactgacggccgagcgggcttacgagctgctcgccgagaagcgcgccaagggc
ccctcgacgcgcaagaaggccgccaagaagtcgacgaagaaggctgcgacgaagaagacc
gccgccaagaagacgacgacgaagaagaccgctgcgaaaaagacgacggccaagaaggcc
tga

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