Dasypus novemcinctus (nine-banded armadillo): 101418729
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Entry
101418729 CDS
T07872
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101418729 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnm03041
]
101418729 (DDX42)
Enzymes [BR:
dnm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101418729 (DDX42)
Spliceosome [BR:
dnm03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101418729 (DDX42)
Complex B
101418729 (DDX42)
Complex C
U2 SnRNP specific factors
101418729 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
101418729
NCBI-ProteinID:
XP_004456873
Ensembl:
ENSDNOG00000007961
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKTADSDSDDDPLEAFM
AEVEDQAARDMKRLEDKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENTDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQTASGNNAREGTGGGN
GKRERYTENRGGSRHSHGESGIRHGDSPRHGDGGRHGDGYRYPESSSRHGDSHRHVENRH
GGSGGRHGESRGANDGRNGESRKEVCNRDNKMETKVDSNKMDKVDTKTADGFAVPEPPKR
KKSRWDS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggtcctggcacaaagaggggatttggttttggaggttttgcc
attagtgctggaaaaaaggaggaacccaaactcccacaacagtcccatagtgcctttggg
gcaaccagctcttcttcaggatttggaaagtcagctccaccacaactcccttctttctac
aaaattggatctaaacgggccaactttgatgaagaaaatgcatattttgaagatgaagaa
gaagactctagcaatgttgatttaccttacattcctgctgaaaactcacctactcgccag
caattccattccaagacggcagattctgacagtgatgatgatcccttggaggcattcatg
gctgaagtggaggatcaggcagcaagagacatgaagaggcttgaagacaaggacaaggaa
agaaaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgatacatggcagaaaacccaactgctggtgtggttcaggaggaggaggaagataac
ctggagtatgatagtgatggaaatccaattgcaccttccaaaaaaatcattgatcctctt
cctcccattgatcattcagagattgactacccaccatttgaaaaaaatttttacaatgag
catgaagagataaccaacctcaccccacagcagttaattgatctccggcataagctcaat
cttcgggtctctggtgctgcacctcctagaccaggaagtagttttgctcattttgggttt
gatgaacaacttatgcaccagattcggaaatctgagtacacacagcctactccaatacag
tgccagggtgtgcctgtggcattaagtggtagagacatgattggcattgccaagacaggc
agtggaaaaacggcagcctttatctggcccatgttgattcatataatggatcagaaggaa
ttggagccaggtgacggaccaattgcagtgattgtgtgtcctacacgggagctttgccag
cagatccatgcagaatgtaagcggtttgggaaagcatataaccttcgatcagtggccgtg
tatggaggagggagcatgtgggagcaggccaaggcccttcaggaaggggcagagattgtt
gtgtgtaccccaggtcgactgattgatcacgtaaagaagaaagctaccaatcttcaaaga
gtctcttaccttgtgtttgatgaagcagatcgaatgtttgacatgggttttgaataccag
gtgcgatccatagcaagtcatgtccgtcctgacagacagactctcttattcagtgcaact
tttcggaaaaagattgaaaaattggcgagagacatccttatcgaccctattcgagtggtg
cagggagatattggagaggcaaatgaagatgtaacacagattgtggagattctccattct
gggcctagtaaatggaactggcttacccggcgtctggtagagtttacatcttcagggagt
gtcctcttgtttgttactaaaaaagccaatgctgaagagctagccaataaccttaaacag
gagggtcataatcttgggctgctccatggggacatggatcagagtgaaagaaacaaggtc
atttcagactttaagaaaaaggacatcccagttctggtggctacagatgttgcagcccgt
ggtctggacattccttcaattaagactgtcattaactatgatgtggcacgagacattgat
acccatactcataggattggccgcacaggaagagcaggcgagaagggtgtggcctatacc
ttactgaccccaaaagacagcaattttgctggtgaccttgttcggaacttggaaggagct
aatcaacacgtttccaaggaactcctagatttggcaatgcagaatgcctggtttcggaaa
tcccgcttcaaaggagggaaaggcaaaaagctgaacattggaggaggtggcctgggctat
agggagcggcctggcctaggctctgagaacacggaccgaggaaataacaacaatgtaatg
agtaattatgaggcctacaagccctccacaggagccatgggagaccggctgacagcaatg
aaagcagctttccagacagcttcagggaataatgcccgagaagggactgggggtggcaat
gggaagagagaaagatatactgagaaccggggtggcagccgtcatagtcacggagagagt
ggcattcgacatggtgatagcccacgtcatggagatggtggtcgccatggagatggatac
cgctacccagaaagcagtagccgtcatggtgacagccatcggcatgtggagaacagacat
ggaggaagtggaggccgacatggggagagccggggtgcaaatgatggtcggaatggtgaa
agcaggaaagaagtttgtaatcgtgacaacaagatggaaaccaaggtggacagcaacaag
atggacaaggtggacaccaagacagctgatggttttgctgtccctgagccacccaaacgc
aagaaaagtcgatgggacagttag
DBGET
integrated database retrieval system
