Dasypus novemcinctus (nine-banded armadillo): 101419590
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Entry
101419590 CDS
T07872
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm03440
Homologous recombination
dnm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101419590 (PALB2)
03460 Fanconi anemia pathway
101419590 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dnm03400
]
101419590 (PALB2)
DNA repair and recombination proteins [BR:
dnm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101419590 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
101419590 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
101419590
NCBI-ProteinID:
XP_004453860
Ensembl:
ENSDNOG00000017609
LinkDB
All DBs
Position
Unknown
AA seq
1188 aa
AA seq
DB search
MEEPPGKPLSCVEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKKSIKKATEQDCLLKQ
EISPQLNHSEPKIKVSPCDKLQISTHLDEETKEKAPVISEVDHESFDVRAGTVERLHVQR
TNDIQEHFLYKINSPDCKKRQSKLPGKRKQEQKRTFISQERESFFKSNSLIHSGERQKEQ
EKINRGNPRIPVSQIRTHLSCPKSEISDSLASVTETNGENVLTPETAKPERGVDGLLREN
NLSKVTTVPWHMRPDSHGSQQLEHVPIKSNYELISQCLINISSISSINLEAQGKNRIFII
NNPVVNKDLSAGDQLPISPNLAADNSQSISELTYNNLPPNEKQYLKEKYHTEKSSQSPRN
GLDGRDESFQENEVLSQCQSLSLESVPPVSTESQTQSCTVLDGLIFPAEYYVRTTRSMSN
CQRKVALEAVIQSHLGVRKKEFKIKNKEAAKNLNLSYEETDQSEIRMSDTFVGQPSSRSP
QKFLSLTEVRPPPGPTEDNDTIRKAVTQPSHRRHTGKRKSNCTTVVDHQLFLPTYGISGV
NRSKEEVVLHQDQSEKEIIHGKKRVKGKEGRCQKEDSLSSSSSANLGLDHDSFSPPFYKN
EMLSLKQLSSFLKITDFHLPDEDFGSLKLEKLKSYPEKPIEPFESKMYIERHPKERNCTD
LEELIPEQVDIEKEDLEKELVLPGKAHSKVPNLESHPKKCLSSSMLLFTPLNTVAPDDNG
KPAADLCSPAFPILGTTPAFGSQARCENVSAEVVGHTCCTSQFSHLKNTIGLASDGKQCN
SPTSPSRLDTTLRVSGRKGQPVHDSDSGPQATPPPLESFTTSDQLHGGTCLALCKHSVEQ
GEIADLPACDSLNPGNLQLVSKLKNPSGSCSIDVGTMWWETAGHKEPCIVTACEYIVSLW
KHLDTWQWKKVYSWHFIEVPVLQIISLPDVCNLVCVALGNLEIREIRVLLCSSDDESEKQ
LLLKSGNIKSVLGLTKRRLVISSGTLCDQQIEIMTFAEDGGIKEKQFLMPPEETILTFAE
VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIGDSYQASICHKAYSEMGLLFVVLRHPC
AKESESLGSPVFQLIVMNPKTALSVGVMLYCLPQGQAGRFLEGDVKDNFAAAVLTSGKIA
IWDLLLGHCTALLPPISDQNWSFVKWSGTGSHLLVGQKDGNIFVYNYY
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggaagagccacccgggaagcccctcagctgtgtggagaaagaaaagttgaaagagaaa
ctagcattcttgaaaagggaatacagcaagacattggcccgccttcagcgtgcccagaga
gctgagaaggttaagaagtctattaagaaagcaacagagcaagattgcttgcttaagcag
gaaatttcaccacaactaaaccactcagaacctaaaattaaagtatctccttgtgacaaa
ttacaaatcagcacccatcttgatgaagaaactaaagaaaaggcccctgtcatatctgaa
gttgaccatgagtcctttgatgttagagctggcacagtggaaagattacatgtacaaaga
acaaatgacatccaagaacattttctctataagatcaacagccctgactgtaagaaaaga
cagagtaagctgccagggaaaagaaagcaggaacagaaaagaacatttatttcacaggaa
agagaatctttcttcaaatctaattcacttatacactctggagaaagacagaaggaacag
gaaaaaattaatagaggaaatcctagaataccagtatcccaaataagaactcacctttct
tgtcctaagtctgaaatttcagattctttagcatcagttacagaaactaatggagagaat
gtattaactccagaaactgccaaaccagaaagaggtgttgatggactcctaagagaaaat
aatttatccaaggtgaccactgttccttggcatatgcgaccagatagccatggtagccag
cagcttgaacacgtacctattaaaagtaattatgaacttatttcccagtgtttaatcaac
attagctctatttcatctataaacttagaggcacaaggtaaaaataggattttcattata
aataacccagtggtaaataaagatttaagtgcaggtgaccagctgcctataagtcctaac
ttagcagcagataattcacaatctataagtgagctcacttacaataacttaccaccaaat
gaaaagcaatacttaaaggaaaaataccacactgagaagtcttcacaatctcccaggaat
ggtcttgatggtagagatgaaagtttccaggaaaacgaggttctaagtcaatgtcagagt
cttagcctagaatcagtccctcctgtttctacagaaagtcaaacacagtcttgcacagtg
cttgatggccttatctttcctgcagaatattatgttagaacaacacgaagcatgtcaaat
tgccaaaggaaagtagccctggaagctgtaattcaaagtcatttgggtgtcagaaaaaaa
gaatttaaaattaaaaataaggaggcagctaaaaatttaaacctttcctatgaagaaact
gaccaaagtgaaattagaatgtctgacacatttgtgggacaaccaagttcaagaagtcct
cagaaattcctctcattaactgaggtcagacctccccctggccctactgaagataatgat
actattaggaaagcagttacccaaccatctcatagaagacacacaggaaaaagaaaatcc
aactgtaccacagtagtagatcatcaactatttttgccaacttatggcatatcaggtgtc
aacaggtccaaggaagaagttgttttgcaccaagatcagagtgaaaaagagattattcat
ggcaagaagagagttaaagggaaggaaggtcgttgtcagaaagaggattccctttcttcc
agtagcagtgctaatttaggtttggatcatgattcgttcagtcctccattttataagaat
gaaatgctaagtttaaagcaactgtcatcttttctcaaaatcacagactttcacttacct
gatgaagattttggatctcttaaacttgaaaaactgaagtcctacccagaaaaaccaatt
gagccttttgaatcaaaaatgtatatagagaggcatcctaaagaaagaaattgtactgat
ttggaagaactgattcctgaacaagtagatatagaaaaggaggacttggaaaaggaactc
gttcttccaggaaaagcacattcaaaagtgccaaacctagaaagccatcctaaaaagtgc
ctttcttcatccatgttacttttcactcctttaaatactgttgcacctgatgataatggc
aaacctgcagcagacctgtgttcacctgctttccccatcttgggtactactccagctttt
ggctcccaagcacgctgtgaaaatgtgtctgcagaggttgtcggacatacttgctgtaca
tcccaattttctcacttgaaaaacacaataggtcttgcaagtgacggtaagcaatgcaac
agcccaaccagtccatcaagattggataccaccctgcgtgtgtcaggtaggaaaggacaa
cctgtccatgacagtgactctggcccccaagcaacacctccacccttggagtcattcact
accagcgatcagctacatggaggtacatgcctggcactgtgtaaacattcagttgaacag
ggtgaaatagcagaccttcctgcttgtgatagcttaaatccaggcaatctccaattggtt
tcaaagttaaagaatccttcaggttcctgttccatagatgtgggtaccatgtggtgggaa
acagctggtcataaggaaccatgcattgtaactgcttgtgaatatattgtttctctttgg
aagcatctggatacttggcagtggaaaaaagtttattcctggcatttcatagaggttcca
gtattacaaataatttcattgcctgatgtttgtaatcttgtgtgtgtggccttgggaaat
ttggaaattagagaaatcagggttttactttgttcctcagatgatgaaagtgaaaagcaa
ttactactgaaatctggaaatatcaaatctgtgcttggcctgacaaagaggaggctggtc
attagcagtgggaccctttgtgatcaacaaatagaaatcatgacttttgcagaagacgga
ggaatcaaagaaaaacagtttttgatgcctcctgaagagactatactaacttttgctgag
gttcaagggatgcaagaagctctccttggtaccaccataatgaacaacattgttatttgg
aatttaaaaactgggcagcttctgaaaaagatgcacattggtgattcctaccaagcttca
atctgtcataaagcctattctgaaatggggctcctgtttgttgttctgagacatccttgt
gccaaagagagtgagtcattgggaagccctgtgtttcagctgattgtgatgaaccctaag
acagccctgagtgtgggtgtgatgctctactgtcttcctcaggggcaggctggaaggttc
ttggaaggtgacgtgaaagataattttgcagcagcagtattgacttctggaaaaattgcc
atttgggacttacttctaggtcattgcactgctctccttccacctatctctgatcaaaat
tggtctttcgttaaatggtcagggacaggttctcatttgctggttggacagaaagatgga
aatatatttgtttacaactactattaa
DBGET
integrated database retrieval system
