Dasypus novemcinctus (nine-banded armadillo): 101427560
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Entry
101427560 CDS
T07872
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X2
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101427560 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnm03021
]
101427560 (PCF11)
03019 Messenger RNA biogenesis [BR:
dnm03019
]
101427560 (PCF11)
Transcription machinery [BR:
dnm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101427560 (PCF11)
Messenger RNA biogenesis [BR:
dnm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101427560 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
101427560
NCBI-ProteinID:
XP_004473924
Ensembl:
ENSDNOG00000012809
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGAVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPASAASKLHVSPIPTLGVKASHQVPVQPDKSRPGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKDFLMSALSQSDNKASKTVSSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKFSHTKDLKNQESENVRVSDMSKRDPRLKKHLQDKTDGKDDDV
KEKRKTAEKKDKDEHIKSSEHRLVGSRNKIINGIVQKQDIITEESEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKTGKVRQSGVKQSHVEEFIPPSR
EERNAKRSTKQDVRDPRRIKKTEEERPQETANQHSAKSGTEPKENVESWQSSKSTKRWKS
GWEENKSLQPGDEHSKSPHLRHRESWSSAKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMI
FEGPNKLSPRIDGPPTAGSLRFEGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQGGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGTLRFDSPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQ
PGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESLSF
SQTGPYNDPPGSAFNAPSQGLQFQRHEQIFESPQGPNFNGPHGPGNQNFSNPLNRASGHY
FDEKNLQSSQFGNFGNLPAPLTVGNIQASQQVLTGVAQPVAFGQGQFLPIHPQNPGAFVQ
NPSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSTTPLNEVAAQPPTEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNVSFFSF
TLLNFFSC
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcgtcgctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtacctcatggattctatc
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttca
acatgggatgaaatattccctttgaagaaactttatgccttggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaggagccttcaacacctggtgcagtggtc
agttcccctagcatttccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacagctaataaggcagcagttactggcaaagcagaaacagttgttagaacttcagcag
aaaaagctagaacttgagctagaacaagctaaagcacaactggcagtttctttgagtgtt
caacaggagacatccaatttaggccctgcatcagcagcatccaaattacatgtttcaccg
attcccactttgggagttaaagcttcccatcaggtccctgtgcaacctgacaaaagccgt
ccaggtccatcattacagattcaggatttgaagggaactaaccgggatccccgtcttaat
aggatgagccaacattcttctcatggaaaagatcaaagtcatagaaaagacttcctaatg
agtgcattgagccagtctgataacaaggcaagtaaaactgtatcctctgaaaaactaaat
tcatccaagcaggaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgatcag
ttagattctaaatctaagtcaaaatctaaatcaccatcacccttgaaaaacaaattctcc
catacaaaagacttgaaaaatcaggaatctgaaaatgtgagggtgtctgatatgagcaaa
agagatccaaggttaaaaaaacatcttcaggataagactgatggcaaagatgatgatgta
aaagagaagagaaaaactgcagaaaaaaaggataaagatgagcacataaaatcatctgaa
catagactggttggaagtagaaataaaatcataaatggcattgttcagaaacaggatata
attacagaagaatcagaaaaacaggggacaaaaccagggagatcgagtactaggaagcgt
tcaagatcacgatcacccaagtctcggtcaccaattatacattccccgaaaagaagagat
aggcgatccccgaaacgaaggcaaaggagtatgtctccaacttcaacacccaaaactgga
aaggttcgccagtcaggagttaagcagtcacatgtagaagagtttataccaccttccagg
gaagaaagaaatgctaaaagaagtactaaacaggatgttagagatcccaggcgaataaaa
aagactgaagaggagcgaccacaagaaactgcaaatcaacattctgcaaagtcaggcact
gaaccaaaggagaatgtagaaagttggcaaagttccaagtccaccaaaagatggaaatct
ggttgggaagaaaacaaaagccttcaaccgggtgatgaacatagtaaatctcctcaccta
aggcatagggagagctggtcaagcgctaagggaatattgtcacctcgagccccaaagcag
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgttcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagagatctccattcaatgat
cgtttcccacttaagcgacctagatatgaagattcagataaaccatttgtagatagtcca
gcatcaagatttgccggccttgatacaaatcagcgacttacggctttagctgaagacaga
ccattatttgatggacctagtaggccatcagtaaccagagatggcccaaccaagatgatt
tttgaaggacctaataagttaagccctagaattgatgggcctcctacagcaggttctctt
cggtttgaagggtcaccaggacaaatggggggaggaggccctttgagattcgaaggacca
caaggtcagctaggaggtgggtgtcctttgagatttgaaggacctccaggaccagtaggg
acacctctacggtttgaagggccaattggtcaaggaggaggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggttctgcaggtggtttgcgatttgaaggaccagga
ggccagcctgtgggtggtctcaggtttgagggacatcgtggtcaacctgtgggtggcctg
agatttgagggacctcatggtcagcctgtgggtactcttagatttgatagtcctcgaggt
cagcctgtaggtggacttagatttgagggtggtcatggtccatcaggggctgctattagg
tttgatggacctcatggtcagccaggaggtgggatcaggtttgagggtcctttgctacaa
cagggagttggaatgaggtttgagggtccccatggtcagtcagtagctggcctgagattt
gaaggacaacataatcagcttggtgggaaccttaggtttgagggtccacatggtcaacca
ggggttgggatcagatttgaaggacctttagtccaacagggaggtggaatgaggtttgag
ggtccttctgtgccaggaggtggcctgagaattgaagggcctctgggtcaaggtggtcca
agatttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaagaactcccggtcag
ccgggcccacagaggtttgatggaccaccaggacagcaggttcaaccaagatttgatggt
gtacctcaaagatttgatggtccacaacaccagcaggcatcaaggtttgatatacctctt
ggtcttcaaggcacacgatttgacaatcatccttcacagagacttgaatcactatctttc
agtcagactggtccatataatgatccacctggcagtgcttttaatgctccatcccaagga
ttacaattccagagacatgaacaaatatttgagtcacctcaaggaccaaattttaatgga
ccacatggtcctggaaaccagaatttctcgaatccccttaacagagcttctggacactat
tttgatgaaaagaatttacagagttctcagtttggaaactttggcaatttacctgctcca
ttaacagtaggaaatattcaggcctctcaacaggttctgactggtgttgctcagccagta
gcatttggccaaggacagtttttaccaattcatccacagaatcctggcgcatttgttcag
aatccttcaggagcactccctaaggcatatcctgataatcatctcagtcaggtggatgta
aatgaattgttctccaaactgctaaaaacaggaattctcaaattgtcccagcctgattca
actacgccactaaatgaagttgctgctcagcctcccactgaagaggaggaggatcaaaat
gaagatcaagatgttccagatcttaccaattttacaattgaagaattgaaacaacgttat
gatagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggttt
acaacatcacaaacagatgtatatgcagatcacttggactggcattaccgacaaaataga
actgaaaaagatgttagcagaaaagtcactcatagacgatggtattacagtttaacagac
tggatagaatttgaggaaatagctgatctggaggaacgtgcaaagagccagttttttgaa
aaggtgcacgaagaagttgtgctcaaaactcaggaggctgctaaagaaaaggaattccaa
agtgtacctgctggaccagctggagcagttgagagctgtgaaatctgtcaagaacagttt
gaacaatactgggatgaagaagaggaggaatggcatttaaaaaatgctattagagtagat
ggaaagatttatcatccatcatgttatgaagattatcaaaatgtaagtttcttctcattt
acattactaaattttttcagttgctaa
DBGET
integrated database retrieval system
