Dasypus novemcinctus (nine-banded armadillo): 101430534
Help
Entry
101430534 CDS
T07872
Symbol
UPF1
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm03013
Nucleocytoplasmic transport
dnm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101430534 (UPF1)
03015 mRNA surveillance pathway
101430534 (UPF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnm03019
]
101430534 (UPF1)
Enzymes [BR:
dnm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101430534 (UPF1)
5.6.2.5 RNA 5'-3' helicase
101430534 (UPF1)
Messenger RNA biogenesis [BR:
dnm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101430534 (UPF1)
mRNA cycle factors
Common to processing body (P body) and stress granule
101430534 (UPF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
NPHP3_N
SLFN-g3_helicase
ATPase
nSTAND3
Helicase_RecD
DEAD
AAA_16
SRP54
UPF1_1B_dom
UvrD_C_2
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
101430534
NCBI-ProteinID:
XP_023440891
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
DADYGDEIAIELRSGVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYH
KLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSA
TIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHN
QIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMVSQAPRRAALVAEDP
PGAAPGPGPRDGTFCRARAAAWGRAGLSSSSRNPRPTPATLQPGVGRVGLFVTSCARPAS
LGTVACSSVLGPLAGRSPGRPLLCCRACPRPRWASHPAPRRRRWSAVEPARELLCPSPGE
QRAPGHRALMRSAPMRQKQPASAPFPASWCRGPRPCDRTDAAEAGKAAARPRPTGGPCTL
APAPASGSSAFSWVGGEPGPAGARDEGHAGRGGGRALLGNAWGSRGCGREASRRSPDASP
GGRPSRPRLQRVQRVRRGGGGRPGRVGWPPRLLSAPGFASPPAADRVKKGFDFQWPQPDK
PMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLV
QYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALT
RARYGVIIVGNPKGARRPPCRPGLEDGQGDPAPAPQGPARPPRPHSTLGRGASTRGDLRR
AAVCCRICPGLRAGAAPARCLARPRGDAARPAGRPSSMYFQTHDQLGMISAGPGHVAAMN
IPIPFNLVMPPLPPPGYFGQANGPAA
NT seq
2420 nt
NT seq
+upstream
nt +downstream
nt
cgacgcagactacggcgacgagatcgccatcgagctgcgcagcggcgtgggcgcccccgt
ggaggtgacgcacaacttccaggtggacttcgtgtggaagtcgacctcgttcgacaggat
gcagagtgcgctcaagacgttcgccgtggacgagacctcggtgtcgggctacatctacca
caagctgctgggccacgaggtggaggacgtcatcatcaagtgccagctgcccaagcgctt
cacggcccaggggctgcccgacctcaaccactcgcaggtctacgccgtgaagacggtgct
gcagcggccgctgagcctgatccagggcccgccgggcacgggcaagacggtgacgtcggc
caccatcgtctaccacctggcgcggcagggcagcgggcccgtgttggtgtgcgccccgag
caacatcgccgtggaccagctgaccgagaagatccaccagacggggctcaaggtggtgcg
gctctgcgccaagagccgcgaggccatcgactcgcccgtgtccttcctggccctgcacaa
ccagatccgcaacatggacagcatgccggagctgcagaagctgcagcagctcaaggacga
gacgggcgagctgtcgtcggccgacgagaagcggtaccgggcgctgaagcgcacggccga
gcgcgagctgctcatggtgagccaggccccgcgtcgtgcggctcttgtggccgaggaccc
gccgggcgcggcccccgggccaggtcctcgcgacggcaccttctgccgcgcccgcgccgc
agcctggggtcgggccgggctttcctcgtcttcccgcaacccgcgtcccacgccagccac
cctgcagcctggggttgggcgcgtcggtctgtttgtgacgtcgtgcgcccggcccgcgtc
tctagggaccgtggcgtgctcctccgtcctcggtcccctcgccggccgcagcccgggccg
tcccctcctttgctgccgggcctgcccgcggcctaggtgggcctcgcatcctgctccccg
gcgccggcggtggagcgctgtggagccggcccgggagctgctgtgcccgtcgcccggcga
gcagcgcgcgccaggccaccgcgccttaatgcgcagtgccccgatgcgccaaaagcagcc
cgcgtcggcgccattccctgcgagttggtgccgggggcctcggccgtgcgacaggaccga
cgccgcagaagctggcaaggccgctgcgcgcccacggccgacagggggtccttgtacctt
ggcccctgcgccagcgtcgggcagcagcgccttctcgtgggtgggtggggagccggggcc
ggccggtgctcgggacgaggggcacgcaggccgcggcgggggccgggctctgctcgggaa
tgcatgggggtctcgagggtgcgggagagaagcttccagaaggagcccggacgcctcccc
ggggggccggcccagcaggccccgactccagcgtgtgcagcgcgtgcggcgcggtggggg
cggccggcctggccgagtggggtggcccccgcgcttgctgagcgcgccgggttttgcctc
tccccccgcagccgaccgcgtcaagaagggattcgacttccagtggccgcagccggacaa
gcccatgttcttctacgtgacgcagggccaggaggagatcgccagctcgggcacctccta
cctcaacaggacggaggctgcgaacgtggagaagatcacgacgaagctgctgaaggcggg
cgccaagcccgaccagatcggcatcatcacgccgtacgagggccagcgctcctacctggt
gcagtacatgcagttcagcggctcgctgcacaccaagctctaccaggaggtggagatcgc
cagcgtggatgccttccaggggcgggagaaggacttcatcatcctgtcgtgcgtgcgcgc
caacgagcaccagggcatcggcttcctcaacgacccgcggcggctcaacgtggccctcac
ccgggcgaggtacggcgtcatcatcgtgggcaacccgaagggtgctcgccgcccgccgtg
ccggccaggcctcgaggacgggcagggcgacccggccccagccccccagggccctgcacg
acccccacggcctcactccacactcgggcggggcgcgagcacccggggagacctgcgccg
tgcggccgtgtgctgccgcatctgcccggggctgcgggctggcgctgctccagcgcggtg
cctggcgcggccccggggtgacgcggcccgtcccgcaggccggccctcgagcatgtactt
ccagacgcacgaccagctgggcatgatcagcgcgggccccgggcacgtggccgcgatgaa
catccccatccccttcaacctggtgatgccgcccctgccgccccccggctacttcgggca
ggccaacgggcccgccgcag
DBGET
integrated database retrieval system
