Dasypus novemcinctus (nine-banded armadillo): 101433514
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Entry
101433514 CDS
T07872
Symbol
SETX
Name
(RefSeq) probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101433514 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnm03021
]
101433514 (SETX)
Enzymes [BR:
dnm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101433514 (SETX)
5.6.2.5 RNA 5'-3' helicase
101433514 (SETX)
Transcription machinery [BR:
dnm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101433514 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
AAA_22
ResIII
SLFN-g3_helicase
nSTAND3
Helicase_RecD
AAA_16
TniB
UvrD_C_2
DUF2706
Motif
Other DBs
NCBI-GeneID:
101433514
NCBI-ProteinID:
XP_004468102
Ensembl:
ENSDNOG00000016840
LinkDB
All DBs
Position
Unknown
AA seq
2682 aa
AA seq
DB search
MKRYRMSTCCWCTPGGASTIDFLKGYAAKNHSSEFQTADEDLCYCLECVAEYHKARDELP
FLHEVLWELETLRLINHFEKSMKAEIGDDDELYIVDNNGETHLFDFTGQDFENKLRVPLL
EILKYPYLLLHERVSELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTA
RNLGKVDRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYK
NYWLGICMLLTILEEQAMDSLLLGSEKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMV
ILDRLGSKVWGQLIDPIEAFQTIINNVSYNKEIQNIRNSSVRTKLEPESYLDDMVTCSQI
VYNFNPEKTKKDSGWRSAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFV
QSLMDLKDLGVAYIVEVIHHLHSEVKDVLNQTDATCDKVTEFFLLILVSVIELHRNKKCL
HLLWVSSQQWVEAVVKCAKLPTTAFARSSEKSSGSCSKGTAMVSSLSLHTMPSNSVQLAC
VQLIRSLLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNI
KFKVPQCSTFVDLTPGCRTPPASYNKEESEKFMKKSKKDMPCLENSSPTFSKEPMKADTY
QIQDNILIEVNNSVEDDNEQNSVKGKLEDHLSAESCLRQTKRLFTERAQGQVKLNTGKQK
SVKENSAYLPQSCTSRNGPERGCDRGVIMSTHLLTDPSTDSLEKVSTSNKDFSLKGDALS
KTSKPKTKAQKDEICAKLSHVIKKQHRKSTLVSNTGNVEENQSVSSIESCSKKDREGPKG
DGFIHNMSLDSNVNLDENRNGEQTSQNSLLLKKKQVKNEELDVFSSHENNCQIQECHVDG
KDLVSFTEMTNTSVKKTPSFKDLVTVLESGDKEMSKNTDHICSNLIREQTPGISPKSEIL
TDSQIDRDLHKLSLIAQASVIKFPSDSTQKSSSQLQRKVKGDKRCFTANQNNESTSVGEL
CRGQVIIISDSDDDDEKILGFEEHIKTDKICIKKECPEQHTSNLEKKLVNEETTKSLLQF
EESDSQFFEFESPSEVFSVWQDHTSDKNSVQKDEKNPCFTHTADITNDWGYDTDYVSEEV
IKKLAEGIEEHIEPQRSSISAEEFCEIDAKFKKKRSEKSMSEDSLRPSSSVRNEDQSDNL
NESGLPENDVRTTTPSSSIQSATTVSLKKSPKLRTYSKPIRRVSLSKTPKKTHSDAKKGQ
SKTSNYISCRTTPAIVPPKKFRACPEPTSTAEKLGLKKAPRRAFELSQRSLECLVQLRDH
GKTVGVVDTRKKTKLISPQTLSVRNNKKLLTSQDLHLQRQMRSKSQQNRQRLFDYESADT
TRSGPPEAQNSDISVPESDRLDHSYKGGTEVIANSNGKQLIKCMSSDPEIIKAKCVSVVT
DNTCLLNQCDSVVLNGRISTSEIIVSPSEIPSSGGGDLMVHYSEVAYLKGGELESSSDTE
EDNLFLTQNDPEDMDLCSQMQNVAVIEVVHRKDVVQIEEDPISLLQLESLISERCKHKDC
VETVKTQVEYCSRHSKAKATDEDVFRKPGLPLSASKPLRPSTTKIFSSSSTSRNANFSKS
LENSSVLPPALKNKSNGVQSILKVPQSASLVPQKPMGEVKNLCNVIHSQTPNNSSRQGYK
LPFGESKSFSASSPVNILMSSQSTSDTFVKEILKWKYEMFVNFCQCGPPASLCQSVSRTV
PVRFQDCGDYFNVFLPLMILNTFETVAQEWISSPNKENFYQLHLRKFPADYKKYWEFVVY
LKECELTKQLHPKENDLVFLVPEKLNGEEKDTERNHIQDFHEYHCGYVHKFRRTSVIRNG
KSECSLSIQTQDSLPVNLNELVKCIVISSLVTTQRKLKAMSLLSGRNQLARAVLNPNPMD
FCTKDLLTTTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTI
VGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKN
PLGNCGDINLVRLGPEKSINNEVLRFSLDSQVNHRMKKDLPSHVQEMHRRKEFLDHQLDE
LSRQRALCRGGREIQRQELDEKIAKVSKERQELASKIKEVQGRPQKTQNIIILESHVICC
TLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPP
TVISMKAQEYGYDQSMMARFCKLLEENVEHNMIGRLPILQLTTQYRMHPDICLFPSNYVY
NRNLKTNRLTETNRCSSDWPFQPYLVFDVGDGSERRDNDSYVNIQEIKLVMELIKLIKDK
RRDVTFRNIGIITHYKAQKMMIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVIVTCVRAN
AMQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGAIIKTCDK
NYRHDAMKILKLKPVLQRSLTHPATVAPEVPRPQGDLPSNKLDGGFTMTSFSSLYDNPSD
FKEAAVTVTSKDPERPFVQDRLRDPRLLRRMGSEATGKFLRDTQPLSPQHPGTTSPMGEP
GFPVTHQDLVSTVQQPFAKVATLSNHKPHVQCEPPAASPDVSTSKQKCGDQEGGLSHRRE
ARAFSEGEQEKCSSMTHHSKRNSDLDKSILDEDSSSKKRKLL
NT seq
8049 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtacagaatgagcacatgttgttggtgtacaccaggtggtgcttccactatt
gactttttgaagggctatgcagccaagaaccactccagtgaatttcaaacagctgatgaa
gatctctgctactgcttggagtgtgtggctgaataccacaaagcaagagatgaattgcca
ttcttgcatgaggttttatgggaattagaaaccttacgtctcataaatcactttgaaaaa
tccatgaaagcagaaattggagatgatgatgagttatatatagtagacaacaatggagag
acacatctgtttgactttactggccaagactttgaaaataagcttcgagttcctcttctt
gaaatactgaaatatccttatctacttctacatgagcgtgttagtgaattatgtgttgaa
gcactttgtcggatggaacaagccaattgttccttccaggtttttgacaaacatccaggc
atctatttgtttttggtccatcccaatgaaatggttcggcgttgggctatcctcactgca
agaaatttgggaaaagtggacagagatgattattacgacttacaggaagttttaacttgc
ctttttaaagtcattgagttgggacttttagaaagtccagacatttatacttcatctgtc
cttgaaaagggtaaattgattcttttgccatcacacatgtatgatactaccaactacaaa
aattattggttaggtatttgcatgttgttgaccattcttgaggaacaagccatggattct
ctgttgctgggctcagaaaaacaaaatgattttatgcagtcaatacttcacaccatggag
aggcagtcagatgatgatagtgtggatcctttctggccagcactacactgtttcatggta
atactggatcgccttggatcaaaggtctggggtcaacttattgatcctattgaggcattt
cagaccattatcaacaatgtgagctacaataaagagatccaaaatatacggaacagctct
gtaaggaccaagttagaaccggagtcgtatttggatgatatggtgacatgtagccagatt
gtctacaattttaatcctgaaaagaccaaaaaggattcaggttggaggtcagccatctgc
ccagattattgccctaacatgtatgaagaaatggaaacattagccagtgtccttcagtca
gatattggtcaagacatgcgggtccataacagcacatttctctggttcatccctttcgtt
cagtccctcatggatcttaaggatttgggtgtggcttatatagtagaggttattcatcat
ctgcactcagaagtcaaagatgtcctcaaccaaacagatgccacgtgtgacaaagtcact
gaattttttcttctaattttggtatcggtgattgaactgcatagaaataaaaaatgttta
catttgctgtgggttagttcccagcagtgggtggaagctgtcgtaaaatgtgccaagctt
cctaccactgcatttgcgcggagttctgagaagtcttctggaagttgctccaaaggaaca
gcaatggtatcatctttgtctttacacacgatgccatctaactctgtacaacttgcttgt
gtgcagctgattagaagtctcctaaaagaaggttatcagcttgggcaacaaactctttgt
aagcgattctgggataaactcaacttattcttaagaggaaacttgtctctaggttggcag
ttgaccagtcaagaaactcatgagttacaaacttgtttaaagcaaattattagaaacata
aaattcaaagtacctcagtgtagcacttttgtggatctgactcctggatgcagaacccct
cctgcatcttataataaagaagaaagtgaaaaatttatgaagaagtctaaaaaagacatg
ccttgtttggaaaattccagcccaacattttctaaagaaccaatgaaagctgacacatat
caaatacaagacaatatattgattgaagtgaataactctgtggaagatgataatgagcaa
aattctgtaaagggtaaactagaagaccatctctcagctgaatcatgcttaaggcagact
aaacgcctttttactgaaagagctcaaggtcaagttaaattaaatacaggaaagcagaag
tctgtaaaagagaactctgcatatttaccacagagttgtacttcaagaaatggtccagaa
agaggatgtgatagaggagtaataatgtcaacacatttattgactgatcctagtactgat
tctctggaaaaggtgtccacatcaaataaggatttctctttaaagggtgatgctcttagt
aaaacctcaaagccaaaaactaaggcacagaaagatgaaatctgtgctaagctatcacat
gttattaagaagcaacacaggaaaagtactttggttagtaatactggaaatgtagaggaa
aaccagagtgtatctagcattgagagttgttcaaaaaaagatagagaaggtccaaaaggg
gatggcttcatacacaatatgtctttagactctaatgttaatctggatgaaaatagaaat
ggagaacaaacatctcaaaatagtttattgttgaaaaagaaacaagtaaagaatgaagag
ttagatgttttttcttcccatgaaaataattgtcaaatacaggaatgtcatgttgatggc
aaagatttggtctcatttacagaaatgaccaatacttcagtgaagaaaacaccttccttt
aaagatctggtgactgtacttgaatcaggggataaggaaatgagtaaaaatactgatcat
atttgttctaacttgataagagaacagacccctggcatcagtcctaagtctgaaatctta
acagattctcagatagacagagacctccacaaattgtctttaatagctcaagccagtgtt
attaagttcccatcagattcaactcaaaaaagttcatcacagctacaaagaaaagtaaaa
ggtgataaaagatgtttcacagctaaccaaaataacgaatctacatctgttggggaactc
tgtcgtgggcaggttattattatttcagattctgatgatgatgatgaaaaaattctgggt
tttgaggaacacattaaaacagacaaaatatgtattaagaaagaatgtccagagcagcac
acttctaatttggaaaagaagctagtaaatgaagaaacaacaaaatcccttctgcagttt
gaggaatctgattctcagttttttgagtttgaaagtccatctgaggtattttcagtctgg
caggatcatacatcagacaagaattcagttcaaaaggatgaaaaaaatccatgttttact
catacagcagatattacaaatgattggggttatgatacagattatgtatctgaagaggtt
attaagaaattagcagagggcattgaagaacatatagaaccacaaagaagtagtatttct
gctgaggaattttgtgaaattgatgcaaaatttaagaaaaaacgatctgaaaaatctatg
tctgaagactccctaaggccttcatcttctgtcagaaatgaggaccagtctgataacctt
aatgagagcggtcttcctgaaaatgatgtgaggactacaactcccagttcaagtattcag
agtgccactacggtttcactaaagaaatctccaaagcttcgtacttactcaaagcccatt
agaagagtctcactttctaaaactcctaagaaaacacattctgatgccaaaaaagggcag
agtaaaacctcaaattacataagttgtaggacaactcctgctatagttccaccaaagaaa
tttcgcgcttgtcctgaaccgacttcgacagctgaaaaacttggtctgaaaaaggctcct
cgtagggcatttgagttgtcccagcgatctttagaatgtttagttcaattacgtgatcat
ggcaaaactgttggagtagttgatacccgaaaaaagactaaattaatttctcctcagact
ctatctgtcagaaacaataagaaactgctgacaagtcaagatcttcatttgcaaaggcag
atgagatccaagtcacaacaaaataggcaaaggctttttgattatgaaagtgcagatact
acaaggtcaggaccacccgaagcacagaattctgacatatctgtaccagaatctgataga
ttagatcatagttataaaggaggaactgaggtcattgctaacagtaatggaaaacaacta
ataaaatgcatgtcttctgacccagaaatcataaaagcaaaatgtgtttctgtagtgact
gataatacatgccttttgaaccagtgtgattctgtagtgttaaatggaagaatatcaaca
agtgaaatcattgtttctccttcagagatcccttcttcaggtggaggtgatctaatggta
cattattctgaggtggcatatttgaaaggaggagaacttgaatccagcagtgatacagag
gaagataatttatttttaacacaaaacgatcctgaagatatggatttatgttcacaaatg
cagaatgttgcagttattgaagtagttcacagaaaagatgtagttcagatagaagaagat
cctataagtctgctccaattggaatccttgattagtgaaaggtgtaagcacaaagattgt
gttgaaactgtgaaaacccaggttgagtactgttcgagacactctaaagctaaagcaaca
gatgaagatgtatttcgtaaacctggcttgcctctttctgcatctaaacctttgagacct
tctactactaagatctttagctcaagcagtacttcacgaaatgctaatttttccaagtct
ttggaaaattcttcagtacttccaccagctctaaaaaataaatcaaatggagtacaatct
attttgaaagtaccacagtcagcctctctggtgcctcagaagccaatgggtgaagtaaag
aatttgtgcaatgtcattcattctcagactccaaataattctagcagacaaggttacaaa
cttccttttggtgaaagcaagtcattttcagcttcctctccagtaaatattctcatgtca
tcacagtccacctctgacacctttgttaaagagatcttaaaatggaaatatgaaatgttt
gtcaacttctgtcaatgtggacccccagcaagtctttgtcagtccgtttcaagaactgtg
cctgtcagatttcaagattgtggagattattttaatgtttttctccctttgatgatattg
aatacttttgaaactgtggcacaggaatggatcagctctccaaataaagagaatttctat
cagttgcatttacgaaaatttcctgctgattataagaaatattgggagtttgtggtttat
cttaaggaatgtgaactgactaagcagcttcatccaaaggaaaatgatttggtgtttttg
gttcctgaaaaactaaatggagaggagaaagatacagaaagaaaccacatacaagatttc
catgaatatcactgtggttatgttcataaatttcgacgtacttcagtcatacgtaatggg
aaatcagagtgttccctttccatccagactcaagacagtttgccagtcaatttaaatgaa
cttgtcaaatgtattgtaatcagttctctggtaactacacaaaggaagttaaaagccatg
tctctgttgagtggtcggaaccaactggccagagctgttctgaatccaaatcccatggac
ttctgtacaaaagatttactaactacgacatctgagagaattattgcctacttaagagat
ttcaatgaagaccaaaagaaagcaatagaaactgcctatgccatggtaaaacactcacca
tcagttgccaaaatctgtctgattcatggaccacctggaacaggaaaatcaaaaactatc
gttggcctcctgtaccgcctactgacagagaaccagagaaggggacattcagatgaaaac
tccaatgccaaaatcaaacaaaaccgggtccttgtgtgtgcaccttccaatgcagctgtt
gatgaacttatgaaaaaaattatcctcgaattcaaagaaaaatgtaaagacaagaagaat
cctttggggaactgtggtgatataaatttggtacgactgggtccagaaaagtctattaat
aacgaggtcctaaggttcagtttggacagccaagttaaccacagaatgaaaaaggactta
ccttctcatgttcaggagatgcatagaagaaaggagtttctagatcatcaactagatgaa
ctttcccgccagcgtgctttgtgccgaggtggaagggaaatacagaggcaagaattggat
gaaaaaattgccaaagtttcaaaagaaaggcaggaacttgcgtctaaaattaaagaggtt
caaggacgcccacaaaaaacacagaacatcatcatcttagagtcccatgtcatctgctgc
acattgagcacgagtggtggtttactgcttgagtcggcttttcgtgggcaagggggtgtc
ccctttagttgtgtcattgttgatgaggctgggcagtcttgtgaagttgagacccttact
ccactcatccatcgttgcaacaagcttattctagtaggagatccgaagcagctccctccc
acagtcatttctatgaaagcacaggagtacggttatgaccaatcaatgatggctcgcttc
tgcaaactgctggaagagaatgtggagcacaatatgattggcagactgcctattttacag
cttactactcaatacaggatgcatccagacatatgtctcttcccttctaattatgtttat
aacagaaacttgaaaacaaacagattgactgaaactaatcgatgttcatcagactggcca
tttcaaccttaccttgtatttgatgtcggagatggttcagaaagacgggataatgactca
tatgttaatattcaagaaataaaactggtgatggaactaattaagcttattaaagacaaa
agaagagatgttactttccggaacattggcataataacccattacaaggctcagaagatg
atgattcagaaggatttggacaaagagtttgatagaaaaggaccagcagaagtggatact
gtagatggattccagggtcgtcagaaggattgtgttattgttacttgtgtcagagcaaat
gccatgcaaggctcaattggattcctggcaagtttgcagagattgaatgtcactattaca
cgagccaaatacagcctcttcatcctcgggcatttgagaaccctaatggaaaatcaacat
tggaatcacctgattcaggatgctcagaaacgtggtgccattattaagacctgtgacaaa
aactacaggcatgatgcaatgaagattctgaaactaaagcctgttttacaaagaagtctt
actcatcctgctaccgtagctccagaggtgcccagaccccagggtgacttgcccagcaac
aagctagatggtggattcaccatgacatctttttcttctctatacgacaatccttctgac
ttcaaggaagctgctgttactgttacttcaaaggaccctgaaaggccttttgttcaggac
cgacttcgggatccaagactccttagaaggatgggctctgaagctacagggaaattccta
agggatacacaacctttgagcccccagcatcctggcacaacatctcccatgggagagcca
ggctttcctgtaactcaccaggatcttgttagtactgtgcagcagccctttgctaaagta
gccactctgagcaaccataaacctcatgtgcagtgtgaacctccagcagctagtcctgat
gtttccacaagtaaacaaaaatgtggtgaccaggaaggagggctcagtcacagaagagag
gccagggctttcagtgaaggggaacaggaaaagtgtagctctatgacccatcattcaaag
aggaactctgacttggacaagagcatactagatgaggacagtagttcaaagaaaagaaag
cttttatag
DBGET
integrated database retrieval system
