Entry |
|
Symbol |
PNN
|
Name |
|
KO |
|
Organism |
dnm Dasypus novemcinctus (nine-banded armadillo)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dnm00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101435398 (PNN)
03015 mRNA surveillance pathway
101435398 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dnm03019]
101435398 (PNN)
03041 Spliceosome [BR:dnm03041]
101435398 (PNN)
Messenger RNA biogenesis [BR:dnm03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101435398 (PNN)
Spliceosome [BR:dnm03041]
Complex C
Other components
EJC/TREX
101435398 (PNN)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
725 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESXXXXXALFEGRRIEFAEQINKMEARPRRQAMKEKEHQVVRN
EEQKAEQEEGKVVQREEDLEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EIEVKMEEETEIRESEKQQDSQPEEVMDVLEMVENVKNVIAEQEVMETDQVESVEPSENE
TSKEMEPEMEFEVEPDKECKSLSPGKENSSALDIEKEPEEKEEKESEPQTEPMAQPQLQP
QPQPQPQPQPQPQSQSQSQAVPEPQPLSQPEILPLAVLQPPLQVIQEQGHLLPERKEFPV
ESVKLTEVPVEPVLTVQPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSS
GSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDR
KRRDTSGIERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDR
KDKRR |
NT seq |
2178 nt +upstreamnt +downstreamnt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaggagagcctaaag
aacgtggatgagaatattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctcaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtaagtaggctgggcggggagcgtcggacgaggagagaatcacgccaagaaagc
gacgcagaggatgatgatgttaaaaagccagcgttgcagtcttcagttgtagctacctcc
aaggagcgtacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
agaaatcgacgaatatttggcttgttgatgggcactcttcagaaatttaaacaagaatct
actgttgctactgagaggcaaaaaaggcgccaagaaatcgaacaaaaacttgaagtacag
gcagaagaagagagaaagcaggttgaaaatgagagaagggaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttattctacattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcnnnn
nnnnnnnnnntagctttatttgaaggtagacgtatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaagcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggttcagcgagaggaagatttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcacagtgatgcagagaaagaacaggaggaggaggagcaaaaacag
gaaattgaggttaagatggaggaagaaactgagataagggaaagtgagaaacagcaggat
agtcagcctgaagaagttatggatgtactagagatggttgagaatgtcaaaaatgtaatt
gctgagcaggaggtaatggaaactgatcaagtggaaagtgtagaaccttcggaaaatgaa
actagcaaagaaatggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgggaaagagaattctagtgctctagatatagaaaaggagcctgaggaa
aaagaagaaaaagaatctgagccccaaacagagcctatggctcaacctcaacttcagcct
caaccccagccccagccccagccccagccccaacctcagtcccaatctcagtctcaagct
gtacctgagccccagcctctctctcagcctgagattttgccattagctgttttacagcca
cctcttcaggttattcaggaacaaggacatttactacctgagaggaaggagtttccagta
gaatctgtaaaacttactgaggtgccagtagagccagtcttgacagtacaaccagaaagc
aagagcaaaaccaaaactaggagcagaagcagaggtcgagctagaaataaaacaagcaag
agtagaagtcgaagtagtagcagtagcagctctagtagcagttcaactagtagcagcagt
ggaagtagttccagcagtggtagtagcagcagtcgaagcagttccagtagcagctctagt
acaagtggcagcagcagcagagatagtagcagcagcactactagtagtagtgagagtaga
agtcggagtaggggccggggacataatcgagatagaaaacacagaaggagtgtggatcgg
aagcgaagggatacttcaggaatagaaagaagtcacaaatcttcaaaaggtggtagtagt
agagatacaaaaggatcgaaagataagaattcccggtctgacagaaagaggtctatatca
gagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacagg
aaagacaaaaggcgttaa |