Entry |
|
Symbol |
SMURF1
|
Name |
(RefSeq) E3 ubiquitin-protein ligase SMURF1
|
KO |
|
Organism |
dnm Dasypus novemcinctus (nine-banded armadillo)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dnm00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101439273 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101439273 (SMURF1)
04350 TGF-beta signaling pathway
101439273 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101439273 (SMURF1)
04137 Mitophagy - animal
101439273 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
101439273 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:dnm04131]
101439273 (SMURF1)
04121 Ubiquitin system [BR:dnm04121]
101439273 (SMURF1)
03029 Mitochondrial biogenesis [BR:dnm03029]
101439273 (SMURF1)
Enzymes [BR:dnm01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101439273 (SMURF1)
Membrane trafficking [BR:dnm04131]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101439273 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
101439273 (SMURF1)
Ubiquitin system [BR:dnm04121]
Ubiquitin ligases (E3)
HECT type E3
101439273 (SMURF1)
Mitochondrial biogenesis [BR:dnm03029]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101439273 (SMURF1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
744 aa
MAAQLVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT
DSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQI
VVSLQTRDRIGTGGSVVDCRGLLDNEGTVYEDSGPGRPLSCFMEEPAPYTDSTGAAAGGG
TCRFVESPSQDQRLQAQRLRNPEVRGSLQTPQNRPHGHQSPELPEGYEQRTTVQGQVYFL
HTQTGVSTWHDPRIPSPLGTIPGGDEAFLYEFLLQGHTSEPRDLNSVNCDELGPLPPGWE
VRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPSEGSVEEEELPAQR
YERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFR
GEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPVSINXXXFVG
RIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDH
TFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNE
LIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEER
RARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPP
YESYEKLYEKLLTAVEETCGFAVE |
NT seq |
2235 nt +upstreamnt +downstreamnt
atggcggcacaactcgtattatgtgccaagaaccttgcaaagaaagatttcttcagactt
cccgacccttttgccaagattgtcgttgacgggtccgggcagtgccactcaaccgacact
gtgaaaaacacgttggacccaaagtggaaccagcactatgatctatacgtggggaaaact
gattctataaccatcagcgtgtggaaccacaagaaaattcacaagaagcagggcgccggc
ttcctgggctgcgtgcggctgctctccaatgccatcagcaggttgaaagacactggctac
cagcgtttggatctatgcaaactaaatccctcagatactgatgcagttcgtggccaaata
gtggtcagtttacagacacgagacagaataggcaccggcgggtctgtggtggactgcaga
ggactgctagacaatgaaggaacggtgtatgaagactcggggcccggaaggccgctcagc
tgcttcatggaggagcctgcgccctacaccgacagcacgggcgccgccgcggggggcggg
acctgccgcttcgtggagtcccccagccaagatcagagacttcaggcacagcgccttcga
aatcctgaggtccgaggttcgctccagacgccccagaaccggccacacggccaccagtct
ccggagctgcccgaaggctacgagcaaagaacgacagttcaggggcaagtttacttcttg
cacacacagactggagttagcacgtggcatgaccccaggatacccagtcccttggggacc
attcctgggggagatgaagcttttctatacgaattccttctacaaggccatacctccgag
cccagagacctgaacagtgtgaactgtgatgaacttggaccactgccaccaggctgggaa
gtcagaagtacagtttcggggagaatatattttgtagatcataataaccgaacaacccag
tttacagacccaagattacaccacatcatgaaccaccagtgccaactaaaggagcccagc
cagccgctgcccctgcccagcgaaggctctgtggaggaggaggagctgcctgcccagaga
tatgagcgagatctggtccagaaactcaaagtcctcagacatgaactctcacttcagcaa
ccccaggctggtcattgccgcatcgaagtttccagagaagaaatatttgaggagtcttat
cgccagataatgaagatgcgaccaaaggacttgaaaaaacgactaatggtgaaattccgt
ggagaagaaggtttagattatggtggcgtggcaagggagtggctttatttattgtgccat
gaaatgctgaacccctattatggactcttccagtattctaccgacaatatctatatgttg
caaatcaatccagattcttcaatcaaccctgtaagtatcaatnnnnnnnnntttgtgggt
cggatcatgggtctggctgtgttccacggacactacataaatgggggcttcacggtcccc
ttctacaagcagctgctggggaaacccatccagctctcggacctggaatcggtggaccca
gagctccataagagcttggtgtggattctagagaacgacatcacccctgtgctggaccac
accttctgtgtggaacacaatgcttttgggcggattctgcagcatgagctgaaacccaat
ggtagaaacgttcctgtcaccgaggagaacaagaaggaatatgtccggttgtatgtaaat
tggaggtttatgagaggaattgaagcccagttcttggctcttcagaaagggtttaacgag
ctcatccctcaacacttactgaagccttttgaccagaaagaactggagttgatcattgga
ggcctggataagatcgacctgaacgactggaagtccaacacccgcctgaagcactgcgtg
gcggacagcaacatcgtccgctggttctggcaggcggtggagaccttcgatgaggagagg
agggcccggctcctgcagtttgtcaccggctcgacacgagtccccctccaaggcttcaag
gccctgcaaggctccacaggcgccgcagggccccggctcttcaccatccacctgattgac
gcgaacacggacaacctccccaaggcccacacctgctttaaccggatcgacatcccaccc
tacgagtcttacgagaagctctacgagaagctgctgacggcggtggaggagacctgcggc
tttgctgtggagtga |