Dasypus novemcinctus (nine-banded armadillo): 101439428
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Entry
101439428 CDS
T07872
Symbol
XAB2
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101439428 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnm03019
]
101439428 (XAB2)
03041 Spliceosome [BR:
dnm03041
]
101439428 (XAB2)
Messenger RNA biogenesis [BR:
dnm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101439428 (XAB2)
Spliceosome [BR:
dnm03041
]
Complex B
Other components
Prp19-related factors
101439428 (XAB2)
Complex C
101439428 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
Suf
TPR_12
TPR_8
TPR_15
TPR_1
TPR_NPHP3
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
101439428
NCBI-ProteinID:
XP_023440031
Ensembl:
ENSDNOG00000003533
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MVVMARLARPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCNLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREVGTGLAPTPTAPHPXXXXXXXXXXXXXXXXXLRTQXVGACVRARVIL
EKATKVNFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQN
RVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAVFLEEHKYFEESF
KAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLL
YAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV
LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGTFWQTWKDFEVRHGNED
TIREMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGLDDMKLLEQRAEQ
LAAEAERDQPLRAQSKILFVRSDASREELAELGPAGWGGVGAAGPGPGQWGNWCLTPSPT
EVRLEQQSVPAAVFGSLKDD
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctggctcggcccgagcggccggaccttgtcttcgaggaagag
gaccttccctatgaggaggaaatcatgcggaatcagttctctgttaaatgctggctccgt
tacattgaattcaaacagggggcaccaaagcccaggctcaatcagctgtacgagcgggca
ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcacgcagggca
caggtgaagcatcgctgtgtgactgaccctgcctatgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccacgcctgtggctagattactgccagttcctg
atggaccaggggcgcgtcacacatacccgtcgcacctttgaccgtgccctccgggcactg
cccatcacacagcactctcgtatttggcctctctacctgcgcttcctgcgctcacaccca
ctgcctgagaccgctgtacgaggctaccggcgcttcctcaagctgagtcctgagagcgca
gaggagtacattgagtacctcaagtcgagtgaccgactagacgaggccgcacagcgcctg
gccaccgtggtaaatgatgagcgcttcgtgtccaaggccggcaagtccaactaccagctg
tggcatgagctgtgcaacctcatctcccagaacccggacaaagtgcagtccctcaacgta
gacgccatcatccgcgggggcctcacccgcttcactgaccagctgggcaaactctggtgc
tcactggctgactactatatccgcagtggccactttgagaaggcccgggacgtgtacgag
gaggccatccgcaccgtgatgaccgtgcgggacttcacccaggtcttcgacagctacgcc
cagtttgaggagagcatgattgcagccaagatggagaccgcctcggagctggggcgggag
gaggaggacgacgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccgg
cgacccctgctgctcaacagcgtgctgctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgagtggccctgcaccagggccgcccccgtgaggtgggcactggcctcgccccc
acccccactgccccccacccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnctgaggacccaataggtgggagcgtgtgtgcgagcccgcgtcatcctg
gagaaggccaccaaagtgaacttcaagcaggtggacgacctggccagcgtgtggtgcgag
tgcggcgagctggagctgcggcacgagaactacgaccaggccctgcggctgctgcggaag
gccacagcgctgcctgcccgccgggccgagtactttgacggctcggagcccgtgcagaac
cgtgtgtacaagtcgttgaaggtgtggtccatgctcgccgacctggaggagagcctcggc
accttccagtccaccaaggctgtgtacgaccgcatcctggacctgcgcatcgccacaccc
cagatcgtcatcaactacgctgtcttcctggaggagcacaagtacttcgaggagagcttc
aaggcgtacgagcgtggcatctcgctgttcaagtggcccaacgtgtccgacatctggagc
acctacctgaccaaattcatcgcccgctacgggggccgcaagctggagcgggcacgggac
ctcttcgagcaggcgctggatggctgccctcccaaatacgccaagacgctgtacctgctg
tacgcccagctggaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgc
gccactcgggccgtggagcccgcccagcagtatgacatgttcaacatctacatcaagcgg
gcggccgagatctacggtgtcacacacacccgcggcatctaccagaaggccatcgaggtg
ctgtcggatgagcatgcccgggagatgtgcctgcgcttcgcagatatggagtgcaagctc
ggggagattgaccgtgcccgtgccatctacagcttctgctcccagatctgtgacccccgg
acaacggggaccttctggcagacgtggaaggactttgaggtccggcacggcaatgaggac
acgatccgggagatgctgcggatcaggcgcagcgtgcaggccacatacaacacgcaggtc
aacttcatggcctcacagatgctcaaggtgtcaggcagcgccacgggcaccgtatctgac
ctggcccctggacagagcggcctggacgacatgaagctgctggagcagcgggccgagcag
ttggccgctgaggccgagcgggaccagcccctgcgggcccagagcaagatcctgtttgtg
aggagcgacgcgtcccgcgaggagctggcggagctggggccggctgggtggggcggggtg
ggggcagcagggccggggcctggccagtggggtaactggtgcctcaccccctccccgaca
gaggtgcggctggagcagcagagcgtgccagctgccgtgttcgggagcctgaaggacgac
taa
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