KEGG   Dasypus novemcinctus (nine-banded armadillo): 101440790
Entry
101440790         CDS       T07872                                 
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
  KO
K04556  parkin [EC:2.3.2.31]
Organism
dnm  Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm04120  Ubiquitin mediated proteolysis
dnm04137  Mitophagy - animal
dnm04141  Protein processing in endoplasmic reticulum
dnm05012  Parkinson disease
dnm05014  Amyotrophic lateral sclerosis
dnm05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:dnm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101440790 (PRKN)
   04120 Ubiquitin mediated proteolysis
    101440790 (PRKN)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    101440790 (PRKN)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05012 Parkinson disease
    101440790 (PRKN)
   05014 Amyotrophic lateral sclerosis
    101440790 (PRKN)
   05022 Pathways of neurodegeneration - multiple diseases
    101440790 (PRKN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dnm04131]
    101440790 (PRKN)
   04121 Ubiquitin system [BR:dnm04121]
    101440790 (PRKN)
   03029 Mitochondrial biogenesis [BR:dnm03029]
    101440790 (PRKN)
Enzymes [BR:dnm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     101440790 (PRKN)
Membrane trafficking [BR:dnm04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    101440790 (PRKN)
  Aggrephagy
   Other aggrephagy associated proteins
    101440790 (PRKN)
  Xenophagy
   Other xenophagy associated proteins
    101440790 (PRKN)
Ubiquitin system [BR:dnm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    101440790 (PRKN)
Mitochondrial biogenesis [BR:dnm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    101440790 (PRKN)
SSDB
Motif
Pfam: zf-RING_14 IBR_2 zf-RING_12 IBR_1 IBR AsnRS_N
Other DBs
NCBI-GeneID: 101440790
NCBI-ProteinID: XP_004449869
LinkDB
Position
Unknown
AA seq 287 aa
GPSCWEDVLIPNRMNGECQSPNCPGTGAEFFFKCGAHPTSDKETSVALNLITTNSRNISC
ITCTDTRSPVLVFQCDSRHVICLDCFHLYCVTRLNDRQFVHDPLLGYSLPCVAGCPNSLI
KELHHFRVLGEEQYNRYQQYGAEECVLQMGGVLCPSPGCGAGLLPEPEVRKITCEGGNSL
GCGFVFCRDCKEAYHEGECSALFEASGTVTQGYRVDEKAAEQARWEEASKETIKKTTKPC
PRCHVPVEKNGGCMHMKCPQPQCKFEWCWNCSLEWNRTCMGDHWFDA
NT seq 864 nt   +upstreamnt  +downstreamnt
gggccatcttgctgggaagatgtcttaattccaaatcgaatgaatggtgaatgccagtct
ccaaactgtcctggaactggagcagaatttttcttcaaatgtggagcacatccaacctct
gacaaggaaacatcagtagctttgaacttgatcacaacaaatagtcgaaacataagttgc
ataacgtgtacagataccaggagccctgtcctggttttccagtgtgactcccgccatgtg
atttgtttggactgtttccacttatactgcgtgacaagactcaatgaccggcagtttgtt
cacgaccctctgctcggctactccctaccttgtgtggctggctgtcccaactccttgatt
aaagagctgcatcacttcagggttcttggagaagagcagtataaccggtaccagcagtat
ggtgctgaagagtgtgtgctacaaatggggggtgtgctgtgccccagccctggctgtgga
gcagggttgcttcctgagccagaagtgaggaaaatcacctgtgaagggggcaacagtctg
ggctgtgggtttgtcttttgccgggattgtaaagaagcgtaccatgaaggagaatgcagt
gccctctttgaagcttcaggaacagttactcagggttacagagttgatgaaaaagcagct
gaacaagctcgctgggaagaggcatccaaagaaacaatcaagaaaaccactaaaccctgt
cctcgttgtcatgtgccagttgaaaaaaatggaggatgcatgcacatgaaatgcccgcag
ccgcagtgcaagtttgagtggtgctggaactgcagcctggagtggaaccgcacgtgcatg
ggcgaccactggtttgacgcgtag

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