Dasypus novemcinctus (nine-banded armadillo): 101442061
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Entry
101442061 CDS
T07872
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101442061 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnm03041
]
101442061 (PRPF40B)
Spliceosome [BR:
dnm03041
]
Complex A
U1 snRNP components
U1 related factors
101442061 (PRPF40B)
Complex B
101442061 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
101442061
NCBI-ProteinID:
XP_012377997
Ensembl:
ENSDNOG00000044961
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MDKKPWEEPVIAYTVVPLPSFLWLWQGGNFQNEDDVCGAQPAGSGLAEEGADLPWARSCW
GGQDIGFGDPPSGLCAPFSSFPLCFPSAKAQLCAHPGSYDFSLPQQSVPDSGPRPPAAPA
PFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLT
QIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVSGTGPPRALWSEHVAPDGRIYYYNA
DNKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNLSKESRWTRPKDLADLEAL
VKQETAGKQQQQQPPQALQPQPPQPQPDPPPAPPGPTPIPTGLLEPEPGGSEDGDVSEAA
QALEQGILQQPEEGPSSSTGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDK
AVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTL
QHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLR
RRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRA
LEKEEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFA
NMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDK
RAAALDAGNIKLTFNSLLEKAEAREREREKEEARRTRRREAAFRSMLRQAVPALELGTAW
EEVRERFVCDSAFEQITLESERIRLFREFLQVLESECQHLHTKGRKHGRKGKKHHHKRSH
SPSGSESEEEELPPSSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLL
GSDHGLRKAKKPKKKNKKRRHKSNSPESETDPEEKAGKESDEKEQEQDKDRELRRTELPN
RSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagccttgggaagagccagtcattgcctacacagtagtgcctctcccatct
tttctgtggctttggcaaggtggaaacttccaaaatgaagatgacgtttgcggggcccaa
cctgctggctctggactggcagaagagggagcagacctgccttgggctcggagctgttgg
ggtgggcaggatattgggtttggagaccctccttctggactttgtgctcctttttcatcc
ttccccctctgcttcccttctgcaaaagcccagctctgtgcccatcctgggtcctatgac
ttttctctccctcaacagtcggttcccgattctggtccccggcccccagcagcgcctgcc
cccttcccaccggggccccccatgatgccaccacccttcatgccccctccagggatcccc
ccaccctttcctccgatggggctaccccccatgagtcagagaccaccagccatccccccc
atgcctcctggcatcatgcccccaatgcttccaccaatgggggcaccaccaccgctcaca
cagataccaggaatggtacctcccatgatgccaggcatgctgatgccagcggtgcccgtc
accgcagcgacggctccgggtgcggacaccgccagctctgctgtgtctgggacaggtcct
ccgagggccctatggagtgagcatgtggccccagatgggcgcatctactactacaatgct
gacaacaagcagtccgtgtgggagaagcccagcgtgctcaagtccaaggcggagctgctg
ctgtcccagtgtccctggaaagagtacaagtcggacacaggcaaaccctactactataac
aacctgagtaaggagtcccgctggacccggcccaaggacctggctgacctggaggctcta
gtcaaacaagagactgcagggaaacagcagcagcagcagccgccacaggcgctccagccc
cagcctcctcagccacagcccgaccccccgccggcgcctcctggccccaccccaataccc
acgggcctcctggaacccgagccgggtgggagtgaagatggcgatgtgtcagaggccgcc
caggccctggagcaggggatcctgcagcagccggaggagggccccagcagttctacgggg
cagcatcagccaccacagcaggaggaggaggagtcaaagccagaaccagaaaggtctggc
ctcagctggagcaaccgggagaaagcaaaacaagcgttcaaggagctgctgagggacaag
gctgtcccctccaacgcctcgtgggaacaggccatgaagatggtggtcaccgacccccgc
tacagtgccttgcccaaactgagcgagaaaaagcaggcattcaatgcctacaaggcccag
cgggagaaggaggagaaggaggaggcccggctgagggctaaggaggccaagcagacgctg
cagcatttcctggagcagcacgagcgcatgacctccaccacccgctaccggagggcagag
cagaccttcggggagctggaggtctgggctgtggtccctgagagagatcgaaaagaggtt
tatgatgatgtcctcttcttcctggccaagaaggagaaggaacaggccaagcagctgcgg
cgccgcaatatccaggccctgaagagtatcctggatgggatgagtagtgtcaacttccaa
accacatggtcccaggcccagcagtacctcatggataaccccagctttgcccaggaccat
cagctacagaacatggacaaggaagatgcgctgatctgcttcgaggagcacatccgagct
ttggagaaggaggaggaggaggagcgggagcgggcccggcttcgggagcggcgccagcag
cgcaagaaccgggaggccttccagaccttcctggacgagctgcacgagacagggcagctg
cattctatgtccacttggatggagctgtacccagcagtcagcacggatgtccgctttgcc
aatatgctgggccagccgggctccacccctctggacttgttcaagttctatgtggaggag
ttgaaggcacgattccatgatgagaagaagatcattaaagacatccttaaggaccggggc
ttctgcgtggaagtgaacacggccttcgaggacttcgcccacgtcataagctttgacaag
agggctgctgcgctggacgcaggcaacatcaagctgaccttcaacagtctgctggagaaa
gcagaagcccgggagagggaacgggagaaggaggaggctcggcggacgcggcgcagggaa
gctgccttccgaagcatgctgaggcaggccgtgcctgccctggagctgggcactgcctgg
gaagaggtccgtgagcgctttgtgtgtgactcagcctttgagcagatcaccctggagtcg
gagcggatccggctcttccgggagttcctgcaggtgctggagagcgaatgccagcacctc
cacaccaaaggccggaagcacggcagaaagggcaagaagcaccatcacaagcgttcccac
tcaccctcaggctctgagtcggaagaggaggagctgcccccatcgtctctccggcccccc
aagcggaggcggcggaacccctcggagtcaggctctgagccctcttcctcgcttgattct
gttgaaagtgggggtgctgcccttggaggacggggctctccatcctcccgccttctcctc
ggatcagatcatggccttcggaaagccaagaaaccaaaaaagaaaaataagaagagaaga
cacaagtcgaacagtcccgaaagtgagacagatcctgaggagaaagccggcaaggagagc
gacgagaaagaacaagagcaggacaaggacagggagctccggcggacagagcttcctaac
cgctcgccgggctttggaatcaagaaggagaagacaggctgggacacatcggagagtgag
ctgagtgagggtgagctggagaggcgccggcggacgctcctgcagcagctggatgaccac
cagtga
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