Dasypus novemcinctus (nine-banded armadillo): 101446408
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Entry
101446408 CDS
T07872
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
dnm
Dasypus novemcinctus (nine-banded armadillo)
Pathway
dnm03015
mRNA surveillance pathway
dnm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dnm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101446408 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101446408 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnm03021
]
101446408 (SYMPK)
03019 Messenger RNA biogenesis [BR:
dnm03019
]
101446408 (SYMPK)
Transcription machinery [BR:
dnm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101446408 (SYMPK)
Messenger RNA biogenesis [BR:
dnm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101446408 (SYMPK)
U7-dependent histone pre-mRNA processing factors
101446408 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
101446408
NCBI-ProteinID:
XP_012376294
Ensembl:
ENSDNOG00000016149
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MANSSGDSVTRRSVASQFFTQEEGTGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKLIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIIRLLDSDNDGIR
THAIKFVEGLIVTLSPRVPDSDVPRNQEHDISLDRIPRDHPYVQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLGKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQMSGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VAKPESVLIKRRLSFQGQAISVVGSLGSMSPLEEEVPQAKRRPEPIIPVTQPRLTGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRVKILASLATQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAARASGALDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITENALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDTVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMAILEASSKQEPEAKEAPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGAGSSASARPGPPPAEEAIDFREEGPECETPAIFISMD
DDSGLTEAALLDSSLEGSLPKEAAASGPTAKEERSPQTLASTGEDAVKTSSPAAEEAGEL
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagcagtggggacagtgtcacccgtcggagtgtggcatctcagtttttcaca
caggaggagggaacaggcatcgatggcatgaccacttcagagagggtggtagatctcctg
aaccaggcagcactgatcaccaacgactcaaagatcacagtgctcaagcaggtccaagag
ctaatcatcaacaaagaccccacactactggacaacttcctggatgagatcattgctttc
caagcagacaagttgatcgaagtgcgcaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttattgctgaaattgattgcgaacctcaacatgctcttgagggat
gagaatgtgaacgtggtaaagaaggccatcctcacaatgacgcaactctacaaggtggcc
ctgcagtggatggtcaagtcacgggtcatcagcgagctccaggaggcctgctgggacatg
gtgtctgccatggctggcgacatcatccggttgttggactctgacaatgatggcatccgc
acccatgccatcaaatttgtggagggcctcatcgtcaccctgtcaccccgtgtgcctgac
tctgacgtgccccggaaccaggagcatgacatcagcctggaccgcatccctcgtgatcac
ccctatgttcagtacaatgtgctatgggaagagggcaaggctgccctggagcagttgctc
aagttcatggtgcaccctgccatctcctctatcaatctgaccacggctctggggtccctt
gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctacgagacc
ctgcatgccaacctaccccctacgctgggcaaatctcaggtgagcagcgtccgcaagaac
ctcaagctgcacctgctgagtgtgctaaagcacccagcctccttggagttccaggcgcag
atcaccaccctgctggtggacctgggcacgcctcaggcggagattgcccgcaacatgccc
agcagcaaggatgcccgcaagcggccccgggatgactcagactctacactcaagaagatg
aagctagagcccaacctgggggaggatgatgaggacaaggacctggagccaggcccatca
gggacctcgaaggcctcagcgcagatgtcgggccagtcagacacagacatcaccgctgaa
ttcctgcagcctctgctgacacccgacaacgtggccaatctggtcctcatcagcatggtc
tacctgcctgaggccatgcctgcctccttccaagccatctacaccccggtggagtcagcc
ggcaccgaagcccagatcaagcacctggctcggctcatggccacgcagatgacggcggcg
ggactgggtccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggcaaagccggagagtgtcctgatcaagcggcgcctgtcgttccagggccaggccatc
tcggtggtgggctctctgggttccatgtcccctctggaggaggaggtgccccaggccaag
aggaggccggagcccatcatccccgtcacacagcccaggctgacaggcgctggtgggcgc
aagaaaatcttccgtctgagtgacgtgctgaagcccttgactgacgcccaggtcgaggcc
atgaagttaggtgctgtgaagcggatcctgcgggcagagaaagctgtggcctgcagcggg
gcggcccaggttcgcgtaaagatcctggccagcctggcgacgcagttcgactcaggccta
aaggccgaggtcctgtccttcatcctggaggacgtgcgggcccgcctagacctggccttt
gcctggctctaccaggagtacaacgcctacctggcagccagggcctcgggcgccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaagagaagccagaccagaag
gatgggatcttcaccaaagttgtgttggaggcgccactcatcactgagaatgccctggag
gtgattcgcaagtactgcgaggacgagagtcgcacctacctgggcatgtccacgcttcga
gacctgatcttcaaacgcccctcccgccagttccagtacctgcatgtcctgcttgacctc
agttcccacgagaaggacaaggtacgttcccaggctctgctcttcatcaagcgcatgtat
gagaaggagcagctgcgcgagtatgtggagaaatttgccctcaactacctgcagctcttg
gtccaccccaacccaccgtctgtgctgtttggagctgacaaggacacagaggtggcagca
ccctggactgaggagacggtgaagcagtgtctgtacctctacttggccctcctgcctcag
aaccacaagctgatccatgagctggcagccgtgtacactgaggccatcgctgacatcaag
cggacggtgctaagggtcatcgaacaaccaatccgaggaatgggcatgaactcaccagag
ctgctcttgctggtggaaaactgtcccaagggggcggagacactggtcacccgatgcctg
cacagcctcacagacaaggtgccgccctccccggagctggtcaagcgggtccgggacctc
taccataagcgcctgccagatgtccgcttcctcatccctgtgctcaatggtctggagaag
aaagaggtgatccaggccctgcccaaactcatcaaactcaaccccatcgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcatggtgaagggaactctgccttgtcccccctg
aatcccggagagcttctgatcgcattacacaacattgacacagtgaagtgcgacatgaaa
tctatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaagtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaaa
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccaccccagcag
ctgggtgccgtctttgacaagtgccccgaactccgggagcccctgctggcccatgtccgc
tccttcaccccccaccagcaagcacacatccccaactccatcatggctattctggaggcc
agcagcaaacaggagccagaggccaaggaggcacccgcggggcccctggaagaggatgac
ttggagcccctggccctggcgcccgccccagcaccccgtccccctcaggacctcattggc
ctgcggctggcgcaggagaaggccctaaaacggcagctggaggaggagcagaagctgaag
cctgggggcgcgggctcctcggcctcggcgcggccaggccctcccccagcggaggaagcc
atcgatttccgggaggaggggcctgagtgcgagaccccggccatcttcatcagcatggac
gacgactcggggctgaccgaggccgcgctcctggactcgagtcttgaggggtcgctccct
aaggaggcagcagcgagcgggccgaccgcaaaggaggagcggagcccccagaccctcgcc
tctaccggagaagacgccgtgaagacctctagcccggccgctgaggaagcgggggaactc
tga
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