Dichelobacter nodosus: DNO_0206
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Entry
DNO_0206 CDS
T00517
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dno
Dichelobacter nodosus
Pathway
dno03030
DNA replication
dno03410
Base excision repair
dno03420
Nucleotide excision repair
dno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DNO_0206 (polA)
03410 Base excision repair
DNO_0206 (polA)
03420 Nucleotide excision repair
DNO_0206 (polA)
03440 Homologous recombination
DNO_0206 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dno03032
]
DNO_0206 (polA)
03400 DNA repair and recombination proteins [BR:
dno03400
]
DNO_0206 (polA)
Enzymes [BR:
dno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DNO_0206 (polA)
DNA replication proteins [BR:
dno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DNO_0206 (polA)
DNA repair and recombination proteins [BR:
dno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DNO_0206 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNO_0206 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
DUF5878
HTH_KIF26A_B_1st
Motif
Other DBs
NCBI-ProteinID:
ABQ14093
UniProt:
A5EWG4
LinkDB
All DBs
Position
complement(220833..223538)
Genome browser
AA seq
901 aa
AA seq
DB search
MLDSNRLVVLVDGSSYLFRAFYALPPLTTQKGHPTGAMHGVIKMLMRLYDDYQPNYFAVV
FDAAGKTFRHQIYPDYKANRPPMPEDLAVQIQPLHQLITALGFPLIMESGVEADDVIGTL
ARQALAEDYQVIISSGDKDMTQLLTHADITLLDTMKNETITASDVAKRFKIEQLTAAQVI
DFLALVGDKSDNIPGVEKVGAKTAEKWLATYGSLDAIIENADKIRGKVGDNLRAGLAQLK
CSQQLATINQTLDLPYRIADLARGAENPHKLAALCAQYELNDIQNRYLKTTAVAAPKAPE
KLHYHLIQTIAECNALCEKLAQKSAFVFDVETDSLNYMQAHWVGISFAVEAGEAWYLPLV
HQNGINLPFAETLAALKNLFENASIRKIGQHLKFDRHILARYGISLNGVIDDTMLMSYCY
NSTATRHNMDDLADFYLNKQTIRFEDIAGSGAKQRRFDEIDLETAMQYACEDADITLQLY
QFFQQKLASEPTLQALYENVERPLAEILWAMEHQGVKIAGDKLAVQSQELAAQLKTLQKQ
AYQLAGGVFNLDSPKQLQEILFERLALPVIHKTPTGQASTNEEVLQKLAELRQSALPEII
LNYRALGKLKSTYTDKLPELIDPDSKRVHTSYHQAVTSTGRLSSSDPNLQNIPIRSDEGR
RIRQAFIAEEGYSILAADYSQIELRIMAHLSQDERLQRAFQLQQDIHTATAAELFSVAPE
AVDRNQRRDAKAINFGLIYGMSAFGLARQLNISRTQAAEYIDKYFHRYPQVLAYMDSARQ
TAQQQGYVSTLLGRRLYIPDIHNKNMQRRRAAERLAINAPMQGSAADIIKLAMVQFWQTY
GAQKECRLLMQVHDELVFEVATAALDIWQPRITHIMEHALPLSVPLIVDCGVSKDWDGAH
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgctagatagtaatcgtttagtcgttctcgttgacggctcctcttatttatttcgtgct
ttttatgcattaccgccactgactacgcaaaagggtcaccccaccggcgcgatgcacggc
gtgattaaaatgctgatgcggttgtatgacgattatcaacctaattattttgcggtggtt
tttgatgctgccggcaaaacgtttcgccaccaaatttatccagactataaagccaatcgt
ccgccgatgccggaagatcttgccgtgcaaattcaaccgttacatcaattaattaccgct
ttgggttttccgttgattatggaatcgggcgtggaagctgatgacgttatcggaacgctg
gcgcggcaagctttggcagaagattatcaagtgattatttcttccggcgataaagatatg
acgcaattactcacgcacgccgatatcacgttattagatacaatgaaaaatgaaacgatc
accgcttctgatgtagcaaaacgttttaaaatcgaacaattaaccgccgcacaagtgatt
gattttttagcattagttggcgataaatccgataatatccctggcgtggaaaaagttggg
gcaaaaacggcagaaaaatggttggcaacttatggatcgctcgatgcgattattgaaaat
gcggacaaaatccgcggcaaagtcggcgataatcttcgcgcgggtttggcgcaattaaaa
tgttcacaacaacttgccaccattaatcaaacattggatttgccatatcgcattgctgat
ttagcgcgcggcgctgaaaatccgcataaattggcagcgttgtgcgcgcaatatgaatta
aacgatattcaaaaccgttatttgaaaacgaccgccgtcgccgcgccaaaagcgccggaa
aaattgcattatcatttaattcaaacgattgccgaatgcaacgcgttatgcgaaaaattg
gcgcaaaaatcggcatttgtttttgatgttgaaaccgattcgctcaattatatgcaggcg
cattgggtggggattagttttgccgtggaggcgggcgaggcgtggtatttgccgctcgtg
catcaaaatggcatcaatcttccttttgcggaaacgcttgccgcgctgaaaaatttattt
gaaaacgcttccattcgtaaaatcgggcaacatctcaaatttgaccgccacattttggcg
cgttacggcatttcgttaaacggcgtaattgatgacaccatgctgatgagttactgctat
aacagcacagcgacgcgtcacaatatggacgatttagccgatttttatctcaataagcaa
accattcgttttgaagacattgccggcagcggtgctaaacaacgtcgttttgatgaaatt
gatttggaaacggcgatgcaatacgcctgcgaagatgccgatattacgttgcagttgtat
cagttttttcaacaaaaattggcaagcgaacccacgttacaagcgctttatgaaaatgtt
gaacgaccgctagcggaaattttatgggcaatggaacatcaaggcgtgaaaatcgccggc
gataaactcgctgtgcaatcgcaggaacttgctgcacagttaaaaacgttgcaaaaacag
gcgtatcaattagccggcggcgtgtttaatctcgattcacccaaacaattgcaagaaatt
ttatttgaacggctggctttgcctgtcattcataaaacgccgaccggtcaagcaagcacc
aatgaagaagtgttacaaaaacttgcggaactgcggcaatcggcgttgccagaaattatt
ttgaactatcgcgcgctcggtaaactcaaatcgacgtataccgataaattgcccgaactc
atcgatcccgatagtaaacgcgttcacaccagttatcatcaagcggtgaccagcacgggg
cggttatcgtcttctgatccgaatttgcaaaatattccgatccgcagcgatgaagggcgc
cgcattcgtcaagcatttatcgcggaagaagggtatagcattctcgccgcggattattcg
caaattgagctgcgcattatggcgcatttatcgcaagatgaacggctgcagcgcgcgttt
caattgcagcaagatattcataccgcgaccgccgctgaattattttctgtggcgccggaa
gccgttgaccgcaatcagcgccgcgatgccaaagcaattaattttggattgatttacggc
atgagcgcatttggtttagcgcggcaattaaatatcagtcgcacacaagccgcggaatat
attgataaatattttcatcgttatccgcaggtgctcgcttatatggacagcgcacgacaa
accgcgcagcaacaaggttatgtcagcacgcttttgggacggcgtctttatattcctgat
attcataataaaaatatgcagcgccggcgcgcggcagaacggctcgctattaatgcgccg
atgcaaggcagcgccgccgatattattaaattagcgatggtgcagttttggcaaacgtac
ggcgcgcaaaaagaatgccgtttattaatgcaggtgcacgatgaattggtttttgaagtg
gcaacggcagcgctcgatatttggcagccgcggattacgcacattatggaacacgcgtta
ccgttaagcgtgccgcttattgtggattgcggcgtcagcaaagattgggacggcgcgcat
caataa
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