KEGG   Dichelobacter nodosus: DNO_0220
Entry
DNO_0220          CDS       T00517                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dno  Dichelobacter nodosus
Brite
KEGG Orthology (KO) [BR:dno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dno02048]
    DNO_0220 (hsdR)
Enzymes [BR:dno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DNO_0220 (hsdR)
Prokaryotic defense system [BR:dno02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DNO_0220 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD RecX_HTH1 T7-like_Y65
Other DBs
NCBI-ProteinID: ABQ14302
UniProt: A5EWE6
LinkDB
Position
complement(235942..239040)
AA seq 1032 aa
MSEKARSERKTQNRVVALFTAASRPDCLGYNYLGDWSKRDNNRCLEAGFLRDNLKKRGYS
DAHISAALQKLLTATDSTDITLYQANLRTYQLLRYGVPVQIAAGQAHETVHLIDWETPDN
NDFGLAEEVTLRGGYERRPDLVVYINGIAIAVIELKRGSVEVADGIRQLITNQEEIFNKG
FFSTVQLVLAGNDSQGLRYGTTGTPEKFFVEWKDKDTAASEPIAEGALLDKPLAQMFDKV
RLLDLIRNFIIFDAGQKKVPRVHQYHGVKAAQERVKQKEGGVIWHTQGSGKSILMVLLAK
WLLEFDPHARVLVITDRDELDKQIAGVMRNAGVIGEHAASPRITSRAELIEKLGAATPRL
MCALIHKFDTTDLKSEPPKVVGNVYVFVDECHRTQGGDMNKQMKRWLKDAIFIGFTGTPL
LRKDKQTTREVFGTYIHTYKFNEAVADKVVLDLKYEARNVPQRLTSKEAIDAWFEQKTKG
LNNFQRSVLRKRWATMEKLMSSGERKQRIIADIIHDFGVQPRLNNDRGTAILVAASIYDA
CHYFRLFQNTSFGKHCGIITSYEPNHNAISREPEDSDERYKFDTYTQHVLQKNQTTKDYE
DKTKQRFINEPANLKLLIVVSKLLTGFDAPSCTYIYLDNELRDHNLFQAICRTNRLDGDD
KGYGHIVDYKELFEKVQNSIAVYTSDELDIDEDGDNGNVVVKDWLKEGKARLDAAREALR
YLCEPVTIPREIEQYLHYFCGDANDPEALLNTEPLRISFYKSTATFLRAYAEIAQNLEDA
GYSAADIAALEKEVEFYSDTHTAIKMHSGEELDIKPYEADMRHLINTYIQADPAEDLGNL
SLLSLTELIIETGIHDAIAKKFNQKGKLSNNAIAEGIINNIRKTIVREQLTDPKFYDEIS
KLLEDLIKQQRDDTAAYKQFLQKAEELVKKMATKNTGNYPRVLNGHPEAIVLFNNLASIS
TDKTFVCPTNDNDKAALALKLDQAMREQAPANWYGDDVREKQVLNALFPIMSKDQTATQA
IFEIIKNQPGYR
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgtctgaaaaagccagatccgaacgcaagacgcagaaccgcgtggttgccctatttacc
gctgcaagtcgtcctgactgtcttgggtacaattacctaggtgattggagtaaacgcgac
aacaaccgatgcctcgaagcaggttttttgcgcgataacctcaaaaagcgtggttattcc
gacgcgcatatttctgcggcgctgcaaaagctcctaaccgccaccgattccaccgacatc
actttgtaccaagccaatctgcgcacctaccaactgctacgctatggtgtgccggtgcag
attgcagctgggcaggcgcatgaaactgtacacctcattgattgggaaacgcctgacaac
aacgattttggtttggctgaagaggttacattgcgcggcggctacgaacggcgacctgat
ttagttgtttatatcaatggcatcgcgatcgctgttattgagttgaaacgcggttcggtg
gaggttgccgacggtattcgtcagcttattaccaatcaggaagagattttcaataaagga
tttttcagcacggtgcagttagtgctggcaggaaacgattcgcaaggtttacgttacggc
accacaggtacccctgaaaagtttttcgtcgaatggaaagataaagacacagccgcatca
gagcccatcgcagaaggtgcgctgctcgataaacctttggcgcaaatgtttgacaaagtg
cgcttgctggatctgattcgcaacttcattatcttcgatgctgggcaaaaaaaggtgccg
cgcgttcatcaataccacggcgtgaaagcagcacaggaacgagtgaagcagaaagaaggc
ggtgtaatttggcacacccaaggcagcggcaagagcattttgatggtgttgcttgctaaa
tggttactggaatttgatccgcacgcccgcgtcttagtcattactgaccgcgatgagttg
gataagcaaatagcgggggtgatgcgtaatgcaggggtaattggtgagcatgcagcatcg
ccgcgcatcacctcgcgcgcggaattgattgaaaagctaggagcagctacgccgcgtttg
atgtgtgcattgatccacaagtttgatacaaccgatttgaagagcgaacctccgaaagtg
gtaggcaatgtatacgtctttgttgatgaatgtcatcgcacgcaaggcggcgatatgaac
aaacagatgaagcgatggctcaaggacgccattttcatcggtttcaccggtacgcctcta
ttgcgcaaagacaaacaaaccactcgcgaggttttcggcacttatatccacacctacaaa
ttcaatgaagcggtggcagataaagtggtgcttgatctgaaatatgaagcgcgcaacgtg
cctcaacgtctaacgtcaaaggaagctatcgatgcatggtttgaacaaaaaactaaagga
ttgaacaactttcagcgttcggttctacgaaaacgctgggcaacgatggaaaagctgatg
agttccggtgaacgcaagcagcgcattattgctgacatcattcacgactttggagtccag
ccgcgtctcaacaatgatcgaggcacggctattctggtggcagcctccatctacgacgcc
tgtcactatttccgtttatttcaaaacacgtcatttggcaagcactgcggcattattacg
tcctacgaacctaaccataacgcgatttcgcgcgagcccgaggacagcgatgagcgttac
aagtttgatacttacacccagcacgtcctgcagaagaatcaaaccactaaggactacgaa
gataaaaccaagcagcgcttcattaatgagcctgccaatctgaagttgctgatcgtggta
agtaagctactgactggattcgatgcgccttcctgtacctacatttaccttgataacgag
ctgcgcgatcacaatctatttcaagctatttgtcgcacaaaccggctcgacggcgacgat
aagggttacggtcacatcgttgactataaagaattgtttgagaaagtgcagaactccatt
gccgtctacacttcggacgagctggatatcgatgaagatggcgataacggcaacgtagtt
gtaaaagattggttaaaggaaggcaaagcgcggctcgatgccgcccgagaagcactgcgc
tacttatgtgaaccggtgactatacctcgcgaaatagagcagtatctccactatttctgc
ggtgatgccaacgatccagaagcattgctaaacaccgaaccgctgcgcatctctttctac
aagtcaacagccacattcctgcgcgcttatgcagaaattgcccagaatctcgaggacgcg
ggatattcggcggctgatattgctgcacttgaaaaggaggtcgagttctacagcgacacg
cacacagcgatcaagatgcattcgggcgaagaattggacattaaaccttatgaagcggat
atgcgtcacctcatcaacacctacattcaagcagatccagccgaagatttgggaaatctt
agtttgctctcactgaccgagctgatcatcgaaaccggcattcacgatgccattgccaag
aagttcaaccagaaaggcaagctatcgaataatgcgattgctgaaggcatcatcaacaac
atacgcaagacgattgttcgggaacaactgactgatccgaagttttacgacgagatttcc
aagctcctcgaagatctgatcaaacaacagcgcgacgataccgctgcttacaagcaattc
ctccagaaagctgaagagttggtgaaaaagatggcaaccaagaatacaggtaactatccg
cgcgtgctcaacggtcacccggaagcgatcgttctcttcaacaatctggctagcatttcg
acggataaaacgttcgtttgtccgacgaacgacaatgataaagccgcgctcgcgctcaaa
cttgatcaggcgatgcgagagcaggcgccagcaaattggtatggagatgacgttcgtgag
aagcaggtgctcaatgcactgtttcccatcatgtcgaaagatcaaacggcgacgcaggct
attttcgaaatcatcaagaaccaaccggggtaccgatga

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