Dichelobacter nodosus: DNO_0251
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Entry
DNO_0251 CDS
T00517
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dno
Dichelobacter nodosus
Pathway
dno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DNO_0251 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dno03400
]
DNO_0251 (recC)
Enzymes [BR:
dno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DNO_0251 (recC)
DNA repair and recombination proteins [BR:
dno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DNO_0251 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
ABQ13712
UniProt:
A5EWC3
LinkDB
All DBs
Position
complement(274269..277541)
Genome browser
AA seq
1090 aa
AA seq
DB search
MFRITQATDLAHLMPDFLTALHDYPDDIFAETEIVVPSMAIADYLEHHIAEKMGISCRHR
YRFWGEMEWTIIERLSNRSAAQTPLSTTAIHWQLFSWLYAHRAEILADEDHVLAPLLHYL
LAPSSARDEQTLPRLWQFSGEQAQLFTHYLKMRPDWLLTWQQKPDCHLEDIIATLPEMPT
WLRQHYDGVFTVQKYLWQQLFAEAMEHRQQRIEQFYHRLSVDDALPALPARLFVFHPFSL
TDHMLHWLQAFGQRCEVHLWLALVSNGYFPDIVDERWRQSHTNADEHFRSGHVLVSRFGK
QQRDIFRLCQSHNLLEEIQHITPHSADTAQQSLLQRLQADMRALDDQSSLTAAPLVPNDD
SIRIHGCHGLLRQLELLREELVRWLNADETRQLSDILIVLPELESVQDVIRTVFPASGDY
DGAVLPARLTGIIDSSAQRLWQAISGIYVLATTPFNRHTFLQWVLQEEVCTAYGIADKAM
QRTCDQLIAAGFYRGFEQQDLETVADGDARFTLSYALERLLSGLAMPQADIWLENIVPEH
NIRNDDAAALAVLAQIHQQISTIRVQQKNHTTAQFWLDELRQRLEHDFSAFQTTAAWQLI
AQTLTELTEKLQAHHQLTAAAADLYLPLPFILNYIGEQLSTRQVASEPSGVITIGRIGAM
RALPYRLIAFVGADQEQFPHRIAEQRHNLLTIDAPRLGDYHREHDELGSFLHALSSAGSH
FWCFYTAVDPNDHEERLPAAPVQELLDYLAQNGVDQYLHYHLRHQPNPFHREPYRTAPAP
LWQKVQHHLQQSAPDVLPFLPESETFTVNQAEKTMLLSQIARDLLKPARTFLRAHKIDCS
VTDVATDILEPLVFDAQSDGLKRWQIYQALLNDSPHFQYLPFLPAGAAGHHYHLLQNQRI
EAQRAQLFECTGERENTPLQLKTVSFSNGQISADLPAVEVNKWVSLSARRYSVRSIFSEW
LHYLLWCVQTGGGERWLSFAEKEMSVVYRFLPLECETAERELKNWLAIWSRLDSILGMPL
EIAWEIAVAQKEKNPEKAVEQWLNKEIYDDEKEYWQLLLRGQNSTELLLKRWHEYQPLFA
FLVQHIEKIA
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtatcacgcaagcaacggatttagctcatttaatgcccgattttttaacggcg
ctgcacgattatcccgatgatattttcgcggaaacagaaatcgtagtgccatcgatggca
atcgccgattatttagagcatcacatcgcggaaaaaatgggcatcagttgccggcatcgt
taccgtttttggggcgaaatggaatggacgataatcgagcgtttaagtaaccgttccgcg
gcgcagacgccgttatccaccacggcgattcattggcaattattttcgtggttatacgcc
caccgcgccgaaattctcgctgatgaagatcatgtgctggcgccgttattgcattattta
ttggcgccgtcttccgcgcgagacgagcaaactttgccgcgtttgtggcaattcagcggt
gaacaagcgcaattattcacgcattatttaaaaatgcgtccggattggttattaacatgg
caacaaaaacccgattgccatctagaagacatcatcgcaacgctgcccgaaatgcccacg
tggttgcggcaacattatgatggcgtttttaccgtccaaaaatatttatggcaacagctt
tttgccgaagcgatggaacatcgtcagcagcgcatcgagcagttttatcaccgtttatcc
gttgatgacgcgcttccggcgttgccggcgcgcttatttgtgtttcacccgttttcatta
accgatcacatgctgcattggctgcaggcttttgggcaacgttgcgaggtgcatttgtgg
ttagcgctggtgagtaatggttattttccggatatcgttgacgaacgctggcggcaatcg
cacacgaatgccgacgaacatttccgcagcggtcatgttttggtttcacgattcggcaaa
cagcagcgcgatatttttcgcctgtgtcaatctcataatttattagaagagatacaacat
attacgccgcattctgccgataccgcgcaacaatccttactccaacgtcttcaagcggat
atgcgcgctttagacgatcaatccagcctcacggcagcgccgcttgttcccaatgacgac
agcattcgcattcacggttgccacggattattgcggcaattggaattattgcgcgaagaa
ttagtgcgctggttaaatgccgatgaaacaagacaattaagcgatattttaattgtgctg
ccggaattagaaagcgtgcaagatgtgattcgtaccgttttccccgccagcggagattat
gacggcgccgttttgccggcgcgtttaaccggcattattgatagcagcgcgcaacgtttg
tggcaggcaatctcgggaatttatgttttagcaaccacgccgtttaatcggcatacattt
ttacaatgggtattgcaagaagaagtgtgcacggcatacggcattgctgataaagccatg
caacgcacctgcgatcaattaattgcggcgggattttatcgtggttttgagcaacaagat
ttggaaaccgttgccgatggcgatgcgcgctttacgttgagttacgctttggaacgttta
ctttcgggattggcgatgccgcaggcggatatttggttggaaaatatcgtgccggaacac
aatatacgcaatgacgatgccgccgcattagccgttttagcgcaaattcatcagcaaatc
agcacgattcgcgtgcaacaaaaaaatcatacgacggcgcaattttggctcgatgaattg
cggcaacgtttggaacatgatttttcggcttttcaaacgacggcggcgtggcaattaatt
gcgcaaacattaacggaattaacagaaaaattgcaggcgcatcatcaattaaccgcggcg
gctgcggatttatatttgccgttaccgtttattttgaactatatcggcgagcaattatcc
acccgacaagttgcctccgaacccagcggcgtaattacgattggacgcattggggcgatg
cgcgcgttaccgtatcgtttaattgcgtttgtcggcgccgatcaagagcaatttccgcac
cgaatcgccgaacaacggcataatttgttaacgattgatgcgccgcgtttgggcgattat
caccgcgaacacgacgaattaggcagttttttacacgcattaagcagcgccggcagtcat
ttttggtgtttttatactgccgttgatcccaatgatcatgaagaacgtttgcccgccgca
cccgtgcaagaattattggattatttggcgcaaaacggcgttgatcaatatcttcattat
catctgcggcatcaacctaatccttttcaccgcgagccgtatcgcacggcaccggcgccg
ttgtggcaaaaagtgcagcatcatttacaacaatctgcgccagacgttttgccttttttg
ccggaatcggaaacatttaccgttaatcaagcagaaaaaacgatgttgctctctcaaatt
gcccgcgatttgttaaaaccggcgcggacgtttttgcgtgcccataaaatcgattgttcg
gttactgatgtggcaacggatattttagaaccgctggtttttgacgctcaatcagacggt
ttaaaacgttggcaaatttatcaagcgttattaaatgattcgccacattttcaatattta
ccatttttaccggcgggcgcggcaggacatcattatcatttattgcaaaatcaacgcatt
gaagcgcagcgcgcgcaattgtttgaatgcacgggcgaacgggaaaatacgccgcttcag
ttgaaaaccgtatctttttctaacgggcagataagcgcggatttgccggcggtggaggtg
aacaaatgggtatcgctttcggcaaggcgttatagtgttcgcagtattttttcggagtgg
ctgcattatcttttgtggtgtgttcaaacgggcggcggcgaacgttggttgtcgtttgcg
gaaaaagaaatgagcgttgtttaccgctttttgccgttagaatgtgaaaccgccgaacgg
gaacttaaaaattggttggcgatttggtcacgtttggactcaattttaggtatgccgctg
gaaattgcctgggaaattgccgtggcgcaaaaagaaaaaaatcccgaaaaagcggttgag
caatggttaaataaagaaatctatgatgacgagaaagaatactggcaattattattgcgc
gggcaaaacagcacggagcttctgctcaaacgctggcatgaatatcaaccattattcgcg
tttttagtgcaacacattgaaaaaatagcataa
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