Dichelobacter nodosus: DNO_0558
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Entry
DNO_0558 CDS
T00517
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dno
Dichelobacter nodosus
Pathway
dno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DNO_0558 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dno03400
]
DNO_0558 (uvrB)
DNA repair and recombination proteins [BR:
dno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNO_0558 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DNO_0558 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
P-loop_SecA
DUF7897
Kinesin
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABQ14151
UniProt:
A5EVI7
LinkDB
All DBs
Position
594794..596803
Genome browser
AA seq
669 aa
AA seq
DB search
MATKNFQLVADYAPAGDQAPAIEQLLSGLDAGLAKQTLLGVTGSGKTFTMANVIARANRP
TLILAPNKTLAAQLYGEMRAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHI
EQMRLSATKAILERRDTVIVASVSAIYGLGDPREYLKMLLHVTRGSQIDQRSLLSHLAEL
QYTRNDTQLLRGTFRVRGDVIDIMPAEAVEHAVRIALFDDEVERIQYFDPLTGAVIADVP
RVSIYPKTHYATTRDRLLAAIDEIKAELHERCAQLRAQNKLLEAQRLAQRTQFDLEMIME
LGYCSGIENYSRYLSGRAAGEPPPTLHDYLPADALLLIDESHVTLPQLHGMYRGDRSRKE
TLVAHGFRLPSALDNRPLRFEEFEAISPQTIYISATPSDYEREQSGQIVEQLVRPTGLLD
PRVEVRPVAQQVDDVLAEIQRRRAKNERVLITTLTKKMSEDLTDFLQEQGIAVRYMHSDI
HTVERMEIIRDLRLGVIDVLVGINLLREGLDIPEVSLVAIFDADKEGFLRGERALIQTIG
RAARHVDGMAILYADHVTQSMEKALTETQRRREKQTAFNEQHGIVPQTIQKKITDIMEGA
HRVSEKKTTRTPSEETFSSDPKVIIKEIEQLEKAMLAAARDLEFERAAEIRDRIKTLEKA
LLMHMPLKA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacgaaaaactttcaattagttgcggattatgcaccggctggcgatcaagcgccg
gcaattgagcaattattgtcgggacttgatgcggggctggcaaaacaaactttattgggc
gtaactggttctggtaaaacgtttacgatggcaaacgtgatcgcgcgcgccaatcgtccc
actttaattttggcgcctaataaaacgctcgccgcgcaattgtacggcgaaatgcgggca
ttttttccgcataacgccgtggaatatttcgtttcttattacgattattatcaaccggaa
gcttatgttccgtcttcggatacgtttattgaaaaagacgcttccgttaacgaacatatc
gagcaaatgcggctttctgccactaaagcgattttagagcgccgcgataccgttattgtg
gcatcggtttccgcaatttacggtttgggcgatccgcgcgaatatctaaaaatgttgtta
cacgttacccgcggcagccaaattgatcagcgatcgttgttatcgcatttagcagagttg
caatatacccgtaacgatacgcaacttttgcgcggaacgtttcgcgtgcgcggtgatgtc
atcgatattatgccggcggaagcggtggagcacgcggtgcggattgcgttatttgatgat
gaagtagaacgtattcaatattttgatccgttaaccggcgccgtgattgccgatgtgccg
cgcgtcagtatttatccgaaaacgcattatgcaaccacgcgcgatcggttgcttgccgcc
attgatgaaattaaagcggaattgcatgaacgctgcgcgcaattgcgtgcgcaaaataaa
ttattagaagcgcaacgtttggcgcaacgcacgcaatttgatttagaaatgattatggaa
ttgggttattgctccggcattgaaaattattcccgctatctttccggacgcgctgccggc
gagccgccgccaactttgcatgattatttgccggctgatgcgttgttattgattgatgaa
agtcacgtgacgctgccgcaattgcacggcatgtatcgcggtgatcgttcgcgcaaagaa
acgttagtggcgcacggttttcggttaccgtcggctttggataatcgtccgttgcgtttt
gaagagtttgaggcgatttcgccgcagacgatttatatttcggcaacgccaagcgattat
gaacgcgaacaatcggggcaaatcgttgagcaattagtgcgtccgacgggtttattggat
ccgcgggtggaagtgcgaccggtggcgcagcaagttgatgatgttttggcagaaattcag
cgccggcgggcaaaaaatgagcgggttttgattactacgttaaccaaaaaaatgagcgag
gatttaaccgattttctgcaagaacaagggattgccgtgcgttatatgcattctgatatt
catacggtggaacgcatggaaatcattcgcgatttgcgattgggcgtgattgatgttttg
gtgggcattaacttattacgcgagggtttggatattccggaagtgtctttggtggcaatt
tttgatgcggataaagaaggttttttgcgcggcgaacgggcgttgattcaaacgattgga
cgcgcggcgcggcatgtggacggtatggcgattttatatgccgatcacgtgacgcaatcg
atggaaaaagcgttaacggaaacccaaagacggcgcgaaaagcaaaccgcttttaatgaa
caacacggcatcgtgccgcaaacgattcagaaaaaaattaccgatatcatggaaggcgcg
catcgcgtatccgagaaaaaaacaacgcggacgccgtcagaagaaacattttcatctgat
cccaaagtaatcattaaagaaattgagcaattagaaaaagcaatgcttgccgccgcgcgc
gatttggaatttgaacgggcggcagaaatccgcgatcgcatcaaaacattagaaaaagca
ttattaatgcatatgccgttaaaagcataa
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