Dichelobacter nodosus: DNO_0612
Help
Entry
DNO_0612 CDS
T00517
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dno
Dichelobacter nodosus
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dno03032
]
DNO_0612 (gyrB)
03400 DNA repair and recombination proteins [BR:
dno03400
]
DNO_0612 (gyrB)
Enzymes [BR:
dno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DNO_0612 (gyrB)
DNA replication proteins [BR:
dno03032
]
Prokaryotic type
DNA Topoisomerases
DNO_0612 (gyrB)
DNA repair and recombination proteins [BR:
dno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DNO_0612 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABQ13301
UniProt:
A5EVC0
LinkDB
All DBs
Position
complement(654560..656962)
Genome browser
AA seq
800 aa
AA seq
DB search
MSSYDSSRIRVLKGLEAVRIRPGMYIGNTDDGSGLHHMVFEVVDNAIDEALAGYCTEINV
IIHQNESITVRDNGRGIPVDIHKEEGRSAAEVIMTILHAGGKFDASSYKVSGGLHGVGVS
VVNALSEKLELTIRRDGHIHYQQYRHGEPQAPLAIIGDTEETGTEIRFLASRETFHNVEF
DYDTLAKRLQELSFLNSGVRIVLTDERKDKTEVFQYEGGIIAFTRYLNRNKTPIHDTIFH
CAIEKDASIVEISLQWNDSYQENVYYFTNNIPQRDGGTHMAGFRSAMTRTLNNYMEAEGI
AKKAKISTSGDDAREGLTAVVSIKIPDPKFSSQTKDKLVSSEVKGLVEGVLSEKLQEFLY
EHPNEAKIIVNKIVDAARAREAARKAREMTRRKDALDITGLPGKLADCQEKDPALSELFL
VEGDSAGGSAKQGRNRKFQAILPLKGKILNVEKARFDKMLASAEIATLITALGTGIGKED
FDPDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKKGKQ
SQYLKDDHELNELLLNHALEGAELHVNKDAPAIAQPAFEALAREYLALEVLIKRFSHHID
SRVLKALMDAPVLNRDVFFAPEQLQAWLKDYQFHLDRFAQAGVRLTAHLDHNAATPRVHI
VIDQHANEIHNYLDANFAEASEYQKIADFAQKTHGLLQEGAFFSNDKDRVAVHYFSDVMQ
ALFAEGKKSYEIQRYKGLGEMNPEQLWETTLDPSVRRMLQVKVQDAMHADEVFTTLMGEE
VEPRRAFIEENAIRAGNIDI
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttatgactcttcacggattcgtgtattaaaaggcttagaagccgtacgtatc
cgcccgggtatgtatattggtaataccgatgatggcagcggtttgcatcatatggttttt
gaagtagttgataacgcaattgacgaagcattagccggctattgcacggaaattaatgtc
attatccatcaaaacgaatcgattaccgtgcgcgataatgggcgcggcattccggttgat
attcataaagaagaaggacgcagcgccgcggaagtcatcatgacgattttgcacgctggc
ggaaaatttgatgccagttcttataaagtttctggcggattgcacggcgtgggcgtttcc
gtggtcaatgctctgtccgaaaaattagaattaaccattcgccgtgatggtcatattcat
taccaacaatatcgccacggtgaaccgcaagcgcctttagcaatcatcggcgataccgaa
gaaacgggaacagaaatccgttttttggcaagccgcgaaacatttcataacgtggaattt
gattacgataccttggcaaaacgtttgcaagaattatcctttttaaattccggcgtgcgc
atcgtcttaaccgatgaacgcaaagataaaacggaagtttttcaatatgaaggcggcatt
attgcatttacgcgctatttaaaccgcaataaaacgcccattcacgacaccatttttcat
tgcgccattgaaaaagatgcttctatcgtagaaatttctttgcaatggaacgattcttat
caagaaaatgtttactacttcaccaataatattcctcaacgcgacggcggaacgcatatg
gcaggttttcgcagcgccatgacgcgtacactcaataactacatggaagcagaaggcatc
gccaaaaaagccaaaatttcaaccagcggcgatgacgcccgtgaaggactaacggcagtt
gtttccatcaaaattcccgatccgaaattcagttcgcaaaccaaagataaattggtttct
tccgaagtaaaaggtttggttgaaggcgtgttatcagaaaaattgcaagaatttttatac
gaacaccccaacgaagccaaaatcatcgtcaataaaattgttgacgccgcccgcgcccgc
gaagccgcgcgcaaagcccgcgaaatgacgcggcgcaaagatgctttagatatcacggga
ttaccgggaaaactcgccgattgtcaggaaaaagatccagcattatcagaattatttttg
gtggaaggcgattccgctggcggttctgctaaacaaggtcgtaatcgcaaatttcaagcg
attttgccgttaaaaggtaaaattttaaacgttgaaaaagcgcggtttgacaaaatgctt
gcttccgcagaaattgccactttgattaccgcgctcggcacgggtatcggcaaagaagat
tttgatcccgacaaattgcgttatcaccgcatcatcatcatgaccgatgccgacgtcgat
ggtgcgcatattcgcactttattgctcactttcttctatcggcaaatgccagaattggta
gaacgcggtcatatttatatcgcgcaaccgccgctgtacaaagtcaaaaaaggtaaacaa
agccaatatttaaaagacgatcacgaattaaacgaattattgctcaatcatgctttggaa
ggcgcggaattacacgttaacaaagatgcgccggcaattgcgcaacccgcttttgaagca
ttagcgcgcgaatatttggcgttggaagttttaattaaacgtttttcgcatcacattgat
agccgcgttttaaaagcgctgatggatgcgcccgttttaaatcgcgacgtttttttcgcg
cccgaacaattgcaagcatggttaaaagactatcaatttcacctcgatcgctttgctcaa
gcgggcgtgcgtttaacggcgcatctcgatcataatgccgccacgccgcgcgttcacatc
gtcattgatcaacatgcaaacgaaattcacaattatcttgatgcaaattttgcggaagcg
agtgaatatcaaaaaatcgcagattttgcgcaaaaaacccacggattgctgcaagaaggc
gccttttttagcaacgataaagatcgcgttgccgttcattattttagcgacgtgatgcaa
gcattgtttgcagaaggtaaaaaatcgtatgaaattcaacgttataaaggtttgggggaa
atgaatcccgaacaattatgggaaactactttagatcccagcgttcggcgcatgttgcaa
gttaaagttcaagatgcgatgcacgccgatgaggtttttaccacgttgatgggtgaagaa
gttgaaccgcggcgcgcgtttattgaagaaaacgcaattcgcgccggaaatattgatatt
tag
DBGET
integrated database retrieval system
