KEGG   Dichelobacter nodosus: DNO_0736
Entry
DNO_0736          CDS       T00517                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
dno  Dichelobacter nodosus
Pathway
dno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DNO_0736 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dno03021]
    DNO_0736 (rho)
   03019 Messenger RNA biogenesis [BR:dno03019]
    DNO_0736 (rho)
Transcription machinery [BR:dno03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     DNO_0736 (rho)
Messenger RNA biogenesis [BR:dno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     DNO_0736 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Fungal_virus_P2_C NACHT AAA_22 S1CSD-TOTE-2
Other DBs
NCBI-ProteinID: ABQ13810
UniProt: A5EV08
LinkDB
Position
complement(786607..787872)
AA seq 421 aa
MNLSDLKLKSPQALLSLAEEMGLEDISRKRKQDLIFSILKAHAQNGEQIEGDGVLELLPD
GYGFLRSAINSYQAGPDDLYVSPSIIRRCNLRTGDSVSGHLRPPKDNERYFALTKIDTIN
FDPRAAAKHKIPFENLTPLHAESQLKLELGNGSSEDITARMIDLISPIGKGQRGLIVSPP
KAGKTVMLQNIAQSITINHPECYLIVLLIDERPEEVTEMERTVRGEVVSSTFDEPAQRHV
QVAEIVMEKAKRLVEHKRDVVILCDSITRLARAYNTVAPASGKILTGGVDANALQRPKRF
FGAARNTEEAGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEVHLNRRIAEKRIFPAIDI
NPSGTRREELMIDPDMLQKTWILRKILHPMDELQAIEFLMERLKNTKTNEEFFYAMKNGG
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatttaagcgatttgaaactaaagtcgccgcaagctttattaagtcttgcggaagaa
atgggactcgaagatatttcccgtaaacgtaagcaagacctgattttttctatcttaaaa
gcgcacgcccaaaatggcgaacaaattgaaggcgatggcgtgctcgagcttttgccggac
ggttatggttttctccgttctgcgattaattcctatcaagcaggtcccgatgatttatac
gtttcccccagcattattcgccggtgtaatttgcgcacgggagatagcgtttccggacat
ttgcgtccgccaaaagataatgaacgttattttgcgctcaccaaaattgataccatcaat
ttcgatccgcgcgctgctgctaagcataagattccttttgaaaatttaacaccgctgcac
gctgaatcgcaattaaaactcgaattaggcaacggcagcagtgaagatattaccgcgcgc
atgatcgatttaatcagcccgattggtaaaggacaacgcggcttgatcgtttcgccgccg
aaagcgggaaaaaccgtgatgttacaaaacattgcgcaatcaattactatcaatcacccc
gaatgttatttaatcgttttgttgattgacgaacgtccagaagaagttaccgaaatggag
cgcaccgtacgcggtgaagttgtttcttctacttttgacgaacctgcgcaacgtcacgtt
caagtggctgaaattgtgatggaaaaagccaaacgtttggtagaacacaaacgcgatgtt
gtcattttgtgcgattccattacgcgtttagcgcgcgcttacaatacggttgcgccggca
tcgggcaaaattttaaccggcggcgttgatgccaatgctttgcaacgtccgaaacgtttt
tttggtgccgcgagaaatactgaagaagcgggatcgttaaccattattgctaccgcattg
attgataccggttctaaaatggacgaggttatttacgaagaatttaaaggcactggcaac
atggaagtgcatctcaatcggcggattgccgaaaaacgcattttccctgcgatcgatatt
aatccttctggaacgcgacgcgaagaattgatgattgatcccgatatgctgcaaaaaacg
tggattttgcgcaaaattctccacccgatggacgaattgcaagccattgagtttttaatg
gaacgtttaaaaaataccaaaacgaatgaagaatttttttacgcgatgaaaaacggcggt
aaataa

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