Dichelobacter nodosus: DNO_1123
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Entry
DNO_1123 CDS
T00517
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dno
Dichelobacter nodosus
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dno03016
]
DNO_1123 (rnd)
Enzymes [BR:
dno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DNO_1123 (rnd)
Transfer RNA biogenesis [BR:
dno03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DNO_1123 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RRP14
eIF3_N
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ABQ14202
UniProt:
A5EXN2
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All DBs
Position
1168654..1169721
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AA seq
355 aa
AA seq
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MTYQTKWQLTDHLEQLDPERIVVYDSEFVRERHYYPKLSLVQIMQPAWQKAQLIDMQSEL
CCSVWQQLAQQRAPVVIHAASQDLELMHLHGQLLPNMFRDTQIGFSLISPHKAISYLGFV
QHYLGIDLDKSETRSDWLARPLTNEQCQYAANDVGLLLQAYPLLCADLQRLNRMHWWQEE
CQNLLHEQYHHKEPYHWFKLRGAPQKIRKIHQNTAEALVQLRETVAEKYDLPRRKILSDE
KIIEIALAQPQKFDDCLALLPAEHYFLAEENIAEHFEQIRTQTPPAQPRAARLNKRQRNI
LTQLMQFTDDVANALNIHAETLATPNQLRSWILNQEKSALNHGWRQAIFAEFKLR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaaacaaaatggcaacttacggatcatcttgaacaattagatcccgaacgc
atcgtggtttacgacagcgaatttgtgcgcgaacggcattattatcccaagctttctttg
gtacaaatcatgcagccggcttggcaaaaagcgcaattaattgatatgcaaagtgaactt
tgctgcagcgtttggcaacaattggcgcaacagcgcgctcccgttgtgattcacgccgcc
agtcaagatttagaattgatgcatttgcacgggcaattattgccaaatatgtttcgcgat
acgcagatcggtttttctttaatttcgccgcataaagccatcagttatctgggatttgtg
caacattatcttggcatcgatttggataaaagcgaaacgcgcagcgattggcttgctcgc
ccgttaactaatgaacaatgtcaatatgcggcaaatgatgttggcttattgttgcaggct
tatccgttattatgcgcggatttgcagcgcctcaatcgcatgcattggtggcaagaagaa
tgtcaaaatttgttgcacgaacaatatcatcacaaagaaccgtatcattggtttaaattg
cgcggcgcaccgcaaaaaatccggaaaattcatcaaaatacggcagaagctttggtgcaa
ttacgtgaaacggtcgccgaaaaatatgatttaccgcggcgaaaaatattatctgatgaa
aaaattatcgaaattgctttggcgcaaccgcaaaaattcgatgattgtttggcattgtta
ccagcggaacattattttttagcggaagaaaatatcgctgaacattttgaacaaatacgt
acgcaaacgccgcccgcgcaaccgcgcgccgcccgtttaaacaaacgccaacgcaatatc
cttactcaattgatgcaattcacggacgacgtcgccaatgcgctcaatattcacgccgaa
acgctggcaacgcctaatcaactgcggtcgtggattttaaatcaggaaaaaagtgcgctg
aatcacgggtggcggcaagcgatttttgctgaatttaagctgcgttaa
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