Devosia neptuniae: N8A98_06350
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Entry
N8A98_06350 CDS
T08915
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dnp
Devosia neptuniae
Pathway
dnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N8A98_06350 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnp03019
]
N8A98_06350 (recQ)
03400 DNA repair and recombination proteins [BR:
dnp03400
]
N8A98_06350 (recQ)
Enzymes [BR:
dnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N8A98_06350 (recQ)
Messenger RNA biogenesis [BR:
dnp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N8A98_06350 (recQ)
DNA repair and recombination proteins [BR:
dnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N8A98_06350 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UXN70804
LinkDB
All DBs
Position
complement(790697..792541)
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AA seq
614 aa
AA seq
DB search
MDSSIDLFGAVGRGAPRDPLDVLRDIFGHKSFRGQQEDVVRHVVGGGDAVVLFPTGAGKS
ACYQIPAICRPGVGIVISPLIALMRDQVEALRQAGVAAAALNSAMTQEESAQVRGQLRRG
ELDLLYVAPERVATQGFRNMVEGLDIALFAIDEAHCVSQWGHDFRPEYRDLAQLTELFPG
VPRIALTATADPTTREDIIERLGLEGAQVFSTSFDRPNISYSIIERDKAREQLLAFLAGH
KGNSGIVYCLSRAKVEDIADWLSGKGIPALPYHAGLSAERRSANQDAFLKEENICMVATV
AFGMGIDKPDVRYVAHMDLPASIEAYYQETGRAGRDGQPAEAWMSYGMADVVQRRRMIDE
GNAPDEVKRVEHSKLNALLGVCETAECRRKAILAHFGEGHAGNCGNCDTCRSPVESWDGT
EAAIKAMAAIYRTGQRFGAAHVIDVLVGKTTEKVERFGHDKQAVFGQGQDLDNKTWQSVL
RQLTASGLVVVDHAAHGALTLGEGARAVFKRERVVTLRKDRPKKAAEVRQRLSNAVQLAE
PAMTIFNALRDERLRIAKQQGVPPYVIFHDTTLRAMALARPRHLHDILNLPGVGQAKLDR
YGEAFLSVLSDLDV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
ttggattcgagcatcgacctgtttggcgcggtaggccggggcgccccccgcgacccgctc
gatgtgctacgcgatatttttggccacaaaagcttccgcggccaacaggaagatgtggtc
cgccacgtagtgggcgggggcgacgccgtcgtgctcttccccactggcgcgggaaaatcg
gcctgttaccagatccccgccatctgccgccccggcgtcggcattgtcatctctccgctc
atcgctctgatgcgcgaccaggtcgaggctttgcgccaggccggtgtcgccgccgccgcc
ctcaattcggcgatgacccaggaggaatccgcccaggttcgcggccaattgcggcgcggc
gaactcgacctgctctatgtggcgcccgagcgcgtcgcgacccagggtttccgcaatatg
gtcgaagggctcgatatcgcgctctttgccatcgacgaggcccattgcgtgagccaatgg
ggccacgatttccgccccgaatatcgtgatctggcgcaactcaccgagcttttccccggc
gtgccgcgtatcgccctcaccgccacggccgacccgaccacgcgcgaagacattatcgag
cggctgggcctcgaaggcgcccaggtcttctcgaccagttttgatcgccccaatatctcc
tattccatcatcgagcgggacaaggcgcgcgagcaattgctggccttccttgccggccac
aagggcaattcaggcatcgtctattgtctctcccgcgccaaggtcgaagacattgccgat
tggctgtcgggcaagggcattccggctctaccctatcatgctgggctctcggccgagcgg
cgcagcgccaatcaggatgctttcctcaaggaagaaaacatctgcatggtggccaccgtg
gctttcggcatgggcatcgacaagcccgatgtgcgctatgtcgcccatatggacctgccg
gcctccatcgaagcctattaccaggaaaccggccgcgccggccgcgacggccaacccgcc
gaagcctggatgagctatggcatggccgatgtggtgcagcgccgccgcatgatcgacgag
ggcaatgcccccgacgaggtcaagcgcgtcgaacatagtaagctcaatgcgctgctcggc
gtctgcgaaaccgccgaatgccgccgcaaggccatcctcgcccatttcggtgaaggccat
gccggcaattgcggcaattgcgacacctgccgctcccccgtcgaaagctgggatggcacc
gaagccgccatcaaggccatggccgccatctaccgcaccggccagcgcttcggtgccgcc
catgtcatcgatgtgctggtcggcaaaaccaccgaaaaggtcgaacgcttcggccatgac
aaacaggccgtcttcggccaagggcaggacctcgacaacaaaacctggcaatcggtcttg
cgccagctcaccgcctctggcctcgtcgtcgtcgatcacgccgcccatggcgcgctgacc
ctgggcgagggcgcccgcgccgtgttcaagcgcgagcgcgtggtgacgctgcgcaaggat
cgccccaaaaaggctgccgaagtgcgccagcgcctcagcaatgccgtgcaattggccgaa
cccgccatgaccattttcaatgccctgcgcgacgagcgcctgcgcatcgccaagcagcag
ggcgtgccgccctacgtgatcttccacgacaccactttgcgcgccatggccctggcccgc
ccgcgccacctgcacgacatcctcaacctgcccggcgtcggccaggccaagctcgaccgc
tacggcgaagccttcctgtcggtgctgtccgatctggacgtttaa
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