Devosia neptuniae: N8A98_09925
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Entry
N8A98_09925 CDS
T08915
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dnp
Devosia neptuniae
Pathway
dnp00300
Lysine biosynthesis
dnp00470
D-Amino acid metabolism
dnp01100
Metabolic pathways
dnp01110
Biosynthesis of secondary metabolites
dnp01120
Microbial metabolism in diverse environments
dnp01230
Biosynthesis of amino acids
Module
dnp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dnp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N8A98_09925 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N8A98_09925 (dapF)
Enzymes [BR:
dnp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
N8A98_09925 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UXN71469
UniProt:
A0ABY6CGU8
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All DBs
Position
complement(1459821..1460711)
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AA seq
296 aa
AA seq
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MGEAKVNGVPFLKMNGLGNQIIVADMRGRADRVTPAAAIAINATAGTKFDQIMAIHDPKT
AGTAHYIEIINSDGSLAQACGNGMRCVVQFLASESGQKTFMFETVAGLLFGEEHEDGMIT
VDMGTPKLAWYDIPLAEEFADTRQIELQIGPIDAPVLHSPSVASMGNPHATFWVHDDVWN
YALDRFGPMLENHPIFPERANISIAQVLTPDRIILRTWERGAGLTQACGTAACAAVVNGA
RTRRTARKATVTLPGGDLVVEWRADDHVVLTGPAEREWVGMLDPATGGWTRAEEAA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggcaaaagtgaacggcgtgccgtttctcaagatgaacgggctgggcaaccag
atcatcgtggccgatatgcgcggtcgcgccgatcgggtgacgcctgctgccgctatcgcc
atcaatgctaccgctggcaccaagttcgatcagatcatggcgatccatgatccgaagaca
gccggcaccgcccattatatcgagatcatcaattccgatggcagcctggcccaggcctgc
ggcaatggcatgcgctgcgtcgtgcagtttttggcttcggaaagcggtcaaaagaccttt
atgttcgaaacggtggcggggctgctgttcggggaagagcatgaagacggcatgatcacc
gtcgatatgggcacgccaaagctcgcctggtacgacattcccctggctgaagaattcgcc
gatacccgtcagatcgagctgcagatcgggccgatcgatgcgccggtgctgcattcgcca
tcggtcgcctccatgggcaatccgcatgccacattctgggtgcatgacgatgtgtggaac
tatgccttggaccggttcgggccgatgctggaaaaccatccgatcttccccgagcgggcc
aatatctcgatcgcgcaagtgctgacgccagaccgcatcatcctgcgcacctgggaacgc
ggcgccggcctcacgcaagcctgcggcactgccgcctgtgccgccgtggttaatggcgcc
cgcacccgccgcaccgcccgcaaggcaaccgtcaccctgccgggcggcgatctggtagtg
gaatggcgcgccgatgaccatgtcgtgctgaccggcccggccgagcgcgaatgggtcggc
atgctcgaccccgccacgggcggctggacccgcgccgaggaagcggcctga
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