Devosia neptuniae: N8A98_18685
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Entry
N8A98_18685 CDS
T08915
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dnp
Devosia neptuniae
Pathway
dnp03030
DNA replication
dnp03430
Mismatch repair
dnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N8A98_18685 (dnaE)
03430 Mismatch repair
N8A98_18685 (dnaE)
03440 Homologous recombination
N8A98_18685 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dnp03032
]
N8A98_18685 (dnaE)
03400 DNA repair and recombination proteins [BR:
dnp03400
]
N8A98_18685 (dnaE)
Enzymes [BR:
dnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N8A98_18685 (dnaE)
DNA replication proteins [BR:
dnp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N8A98_18685 (dnaE)
DNA repair and recombination proteins [BR:
dnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N8A98_18685 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UXN69242
UniProt:
A0ABY6CAT9
LinkDB
All DBs
Position
3221886..3225341
Genome browser
AA seq
1151 aa
AA seq
DB search
MSGPGFIHLHVHSAYSLLEGALQLDTILKLAKADHQPALGISDTSNLFGALEFSEKASSK
GIQPLIGVELPIDFAASEERVSERGHVAWSGKSSVVLMAQTELGFENLSRLVSRAYLDGE
GGAATARLDWLSREGLEGLICLSGGPEGAIDMAFAQGQDANATRRLDRLADLFGDRFYIE
LQRHGRPQEAAVEPRLVDYAYRKGIPLVATNEPFFKSVAEAEAHDALLAIAGGTVIAQTE
RRKLNDQYYFKTRAEMVALFSDLPETLDSTVEIAQRISYRPLKRKPILPKFAAAPDLSED
EAVAAEAQALREMAVSGLENRFKTGVIDPTKTEQEYRDRLEFELNIIQSMKFPGYFLIVA
DFIRWAKSQGIPVGPGRGSGAGSLVAYATTITDLDPLRYNLLFERFLNPERVSMPDFDID
FCQDRREEVIRYVQSKYGFEQVSQIITFGTLQARAVLRDVGRVLQMPYGQVDRLCKLVPA
NPTDPWSIERTMNEEPQFRRMVEDDETVGELVAIAKNLEGLYRHASTHAAGIIIGDRPLQ
DLAPLYRDPRSDMPVCQYNMKWSEAAGLVKFDFLGLKTLTTIQYAVNMVNQDGGSFRIED
ISIDDVPTYKLYQSGDTFGVFQVEGGGMRRALVDMKPDRFEDIIALVALYRPGPMDNIPL
FCARKRGDEEIEYPHDALKSVLDETYGIIVYQEQVMQIAQLLSGYSLGEADMLRRAMGKK
IKAEMDAQRERFRDGAVKFGLTKNLADTIFDLLAKFANYGFNKSHAATYALVSYQTAYLK
AHHPHEFFAASMTLDMGNTDKLSEFRREAGKKGIEIVPPCVNKSEVLFSVKDKKVLYGLC
AVKGVGRQVAEHIVEVRGDKPFKDLGDFARRVDPRMMNKRTLETLVSAGAFDELAPRREL
AFAAIETVIGTAQALASERNEGQWNMFDTGEPEPFKLPAGVPAWTTTERADRELAAIGFH
LSAHPLDAYSDLFERMRVQRWSDFERAVKDGASAGRLAGTIASRQDRRTRKGTPMMILTL
SDQSGSYECIAFSEQINEFGSLLQPGKSVILMVGADERAEGISVRLLSAEAIDGIAEKVD
RRLTVFAADAKALGSISSQLKRGGEGSVNFVVIRDGGAREYEIELPGSYRLTAEVAGGIK
ALDGVTDVRFH
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccctggcttcatccacctgcacgtccattctgcctattcgctgctggaaggc
gcgttgcagctggacacgattctcaagctggccaaggcggaccatcagcccgctttgggc
atttctgataccagtaacctgttcggggcgctggaattttcagaaaaggccagcagcaag
ggcattcagccgctgatcggggtggagctgccgatcgactttgccgccagtgaggagcgg
gtcagcgaacgcggccacgtcgcctggtcaggcaagtccagcgtcgtgctgatggcgcag
accgaattgggctttgaaaatctctcccgcctggtgtcgcgcgcctatctcgatggcgaa
ggcggcgcggccacggcgcggctcgattggctgagtcgggaaggcctggaaggcctgatc
tgcctcagcggcgggcccgaaggggccatcgacatggccttcgcccaggggcaggacgcc
aatgccacccgccggctggaccggctggcggatttgttcggcgatcgattctatatcgaa
ttgcagcgccacggccgcccacaagaggccgccgtcgagccgcggctggtggattacgcc
tatcgcaagggtattccgctggtagcgaccaatgagcccttcttcaaatcggtcgccgag
gccgaggcacacgatgccttgctggccattgccggcggcacggtgattgcccagaccgag
cggcgcaagctcaacgatcagtattatttcaagacgcgggccgagatggtcgcgctgttc
tcggacttgcccgagacgctggattcgactgtcgagatcgcacagcgtatttcctaccgg
ccgctcaagcgcaagccgatcctgcccaaattcgcggccgctcctgatctgagcgaggac
gaggccgtggccgccgaggcgcaggccttgcgcgaaatggcggtaagcggattggagaac
cggttcaagaccggggtgatcgatccgaccaagaccgaacaggaatatcgcgaccggctg
gagttcgaactcaacatcatccagtcgatgaagtttccgggctacttccttatcgtggct
gattttatccgctgggcaaaatcgcagggcattccggtggggccgggccgcggctcgggt
gcgggctcgctggtggcctatgcaaccaccatcacggacctcgatccgctgcgctacaac
ctgctgttcgaacgcttcctcaatccggaacgcgtgtcgatgccggactttgatatcgac
ttctgccaggaccgccgcgaagaggtgatccgctatgtgcagagcaaatacggcttcgaa
caggtatcgcagatcatcaccttcggaacgctgcaggcccgcgccgtgctgcgcgacgtc
gggcgcgtgctgcaaatgccctatgggcaggtggaccggctgtgcaagctggtgccggcc
aatccgaccgatccgtggtcgatcgagcggacgatgaatgaggaaccccagttccgccgc
atggtcgaggatgacgagaccgtgggcgaattggtggccatcgccaagaatctggaaggc
ctgtaccggcacgcttcgacccatgccgccggcatcatcatcggcgaccggccgttgcag
gatctggcgccgctctaccgcgatccgcgctcggatatgccggtctgccaatacaatatg
aagtggagcgaggcggccgggctggttaagttcgacttcctcggcctcaagacgctgacc
acgatccaatatgccgtcaacatggtcaaccaggatggcggcagcttccggatcgaggat
atctcgatcgatgacgtgccgacctacaagctctaccagagcggggacacgttcggcgtc
ttccaggtggaaggcggcggcatgcggcgcgcgctggtcgatatgaaacctgaccgcttc
gaggatatcatcgctctggtggcgctgtaccgccccggtccgatggacaatattcccctg
ttctgcgcccgtaagcgcggcgatgaggaaatcgaatatccccatgacgcgctgaaatcg
gtgctcgacgagacctatggcatcatcgtttaccaggagcaggtgatgcagatcgcccag
ctgctctcgggctattcgctgggcgaagccgatatgttgcgccgcgccatgggcaagaag
atcaaggccgaaatggatgcgcagcgcgagcgtttccgcgatggcgcggtcaagttcggg
ctgaccaagaatctggccgataccatcttcgacctactcgccaagttcgccaattacggc
ttcaacaaaagccacgcggcgacctatgcgctggtgagctaccagactgcctatctcaag
gcgcatcatccgcatgaattcttcgcggcctcgatgacgctcgatatgggcaataccgac
aagctttccgaattccgccgcgaggcgggcaagaagggcatcgagatcgtgccgccttgc
gtcaacaagtcggaagtcctgttttcggtcaaggacaagaaggttctctacgggctgtgc
gccgtcaagggcgtgggccggcaggtagccgaacatattgttgaagtacggggcgataag
ccattcaaggatctgggtgatttcgcccggcgcgttgatccgcgcatgatgaacaagcgc
acgctggaaacgctggtcagcgctggtgcattcgatgaattggcgccgcggcgcgagctg
gcttttgccgccatcgaaacggtgatcggcacggcccaggccttggcgagcgagcgcaat
gaggggcagtggaacatgttcgacaccggtgagccggagccgttcaagctgccggccggg
gtgccggcctggaccacgaccgagcgcgccgatcgcgaattggcggcgatcgggttccac
ctgtcggcgcatccgctggatgcctattcggacctgttcgagcgcatgcgcgtgcagcgc
tggagcgatttcgagcgggcggtcaaggatggcgcgtcggccggccgactagccgggacc
attgcctcgcgacaggacaggcgcacgcgcaagggcacgccgatgatgatcctgacgctg
tcagatcaaagcggcagctacgaatgcatcgccttttccgagcagatcaatgaattcggc
agtctcttgcagcccggcaaatcggtgatcctgatggtcggcgcggatgagcgcgccgaa
gggatcagcgtgcgcctgctctcggccgaagcgattgacggcattgccgaaaaagtcgac
cggcggctgacggtgtttgcggcggatgccaaggcactgggttcgatcagcagccagctc
aagcgcggcggggagggctcggtcaatttcgtggtgatccgcgatggcggcgcgcgcgaa
tacgagatcgagctgccgggcagttaccggctgacggccgaagtggccggcggcatcaag
gcgcttgatggcgtaacggatgtgcggttccactga
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