Drosophila navojoa: 108649297
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Entry
108649297 CDS
T05898
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dnv
Drosophila navojoa
Pathway
dnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108649297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108649297
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108649297
mRNA degradation factors
5'-3' decay
Decapping complex
108649297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
WD40_WDHD1_1st
WD40
ANAPC4_WD40
YpjP
Motif
Other DBs
NCBI-GeneID:
108649297
NCBI-ProteinID:
XP_030241615
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
MLIALFALAHLPIFRKPLQSLSRCGKGKSNTTIATTTTSNAHLAALTSNCNSQTTGEINL
IGTRLNMSNSNEQDKGAAEAVGAIVAANGNQTDPKKIEIINFKPFDKQCCYSIKTNHTRV
YGCGGSHARGSSKVKLKNVVDYKWEHKYYYPGHLVAVHRDGKHLAYAINVNNKATGMEGM
VRVCNTSTSQRALIKGMNGEVLDLQFAHSERERILAVIDMCSLFVYKIDLIDSNLICKLV
LKVDDPIANYVPEYDMVSWCPYVTNGNSSNNNTSANTATGHEEDDENQLLIWSRSKQFQC
FNVRMIISEYGRGQIKPSSLETGYLKIEEDTLITCAALSPDGTTVAAACLDGLVRFYQIY
LYDVRNHRCLHEWKPHDGKPVASLFFLDNINKPVEDAYWQYVITTSDHNTEIKLWNCSLW
ECLQTINVMASVPSSVQPSMFIAGIDRSANYLVISSLDALAVYVMQISSCGGNEQGSDSG
DSENGCDAHGSSSSIAGSNDPSIRIQNIAEFKLSSGILSFSIVNASMRRLKSTNESYYPF
EEPDDYDDESNATTDALVVHMFVVQAKSLQECQIIYQPCKPTRRLNSSKSSKKRSLSPDN
LLHVTEIKQEPLSNSPNSHNSSTGSGSSAVPLDSLFGKSKRNSVGSVVSVAIAAAAAPSA
ILQEAATTNKSRSASPQYGSNYSQLNLMTPDAFSASAASIVLVNRDGAETNTTTTTDQSA
INSQVLQTLRMLATVTAKGTESANSNLLNLINNTHIEDREQQKLKEQTDARKKFIAIDRN
PERNAAENLASGGSSPSREVQEIMATQEDTDDYEPELENLEYDEDNPYFMICKTENKTDN
EITNSSTVEEAATTSNWLPQDAKLPTKKSAELQNAAQIMSQAVQHKNNGNVPPTLGSSGS
NSNNNTATTLNSSNNNNSSNCSHQIVESATEVNAKLEQLLELIKAQSLHLTKLEHEINKV
QQQQQQYLLQQPSGTTAAALQPKSVNELAYKIEMQLSKLMEQYLKRYENEHKKKLAEFLH
ARETQNRELRDSVLQVLNQYVMNHFTDIIGNVLNMELQRQLLPRVNAKMDQLQNQMQLEI
VQKLNVIDKTVKENIAQVCKSKQFLDAFGKSVLIGVQTSLQTAFIESMSSTLIPAYEKSS
QNMFKQLHEAFSVGIKDFMVEFNAYLQHIPQPHNGEELSNKLSLLKQLVETNLLKHRTEL
TDVMLETQREVKSLEILLARQMQETIRTELRKHMDNQSMALRSQAATPAPTYDLRESIKQ
LLLANHINKAFHQALLANDLNLVEFTLRNTDRMQVFAPDGCRLEQKVLLSLIQQISADMS
NHNELKQSYLNEALLAINMSDPITREHAPKVLSELYRNCQLFIKNYPKSPQCSNVRLLIA
MCSATYRDQFK
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcgcgctctttgcgcttgcacatttgccaatctttcgtaagccattgcaatca
ttatcaaggtgtggcaaaggcaaaagcaacacaacaatagcaacaacaacaacaagcaac
gctcacttagcagcattaacaagtaactgtaattcgcagacaactggagaaataaatcta
attggaacccgcctcaatatgagcaacagtaacgaacaggataaaggagcagcagaggcc
gtcggcgcaatcgtagccgccaatggcaaccagacggatccgaagaaaatcgaaataatc
aactttaaaccttttgataaacaatgctgctatagcatcaaaacgaatcatacgcgagtt
tatggctgcggcggttctcatgcgcgcggttcctccaaggttaagcttaagaatgtcgtt
gactataaatgggagcataaatactattatccgggtcatttggtagccgtgcatcgtgat
ggcaagcatcttgcctatgctatcaatgttaacaacaaagccaccggtatggaaggcatg
gtgcgtgtgtgtaacacgagcaccagccagcgggcactcatcaagggcatgaatggcgaa
gtcttggatctacaattcgcacacagcgaaagggaacgtatccttgcggtcattgacatg
tgttcgctgtttgtgtataagatcgatctaatcgatagtaatttaatatgcaaacttgtg
ttgaaagtggatgatcccattgcgaactatgtgcccgaatatgatatggtctcctggtgt
ccctatgtaaccaacggcaacagcagcaataacaatactagtgcaaacactgctactggc
catgaagaagatgatgagaatcaactattgatttggtcgcgaagtaaacagttccaatgc
tttaatgttagaatgatcatatcagagtatggtcgcgggcaaataaaaccctcgtctcta
gaaacgggctatttaaagatagaagaggatacgttaataacctgcgctgctctatcgcct
gatggcacgaccgttgcggctgcctgtctggatggcttagttcgtttctatcaaatttat
ttgtatgatgtgcgcaatcatcgttgtctgcacgagtggaaaccgcacgatggcaagccg
gtggcctcgttattctttctggataatatcaacaaaccagtggaggatgcctattggcag
tatgttatcaccaccagcgatcataacacagagatcaagttgtggaattgttctctatgg
gagtgcctgcaaacgattaatgttatggcctcggtaccctcgagtgttcagccgagcatg
tttatagctggtattgatcgcagcgccaactatttggttatatccagcctggatgcattg
gctgtctatgtcatgcaaatcagcagctgtggcggcaatgaacaaggcagcgatagtgga
gattcggagaatggctgtgatgctcatggctcgagcagcagcatcgcgggctccaacgat
ccatccatacgcatacaaaatatagccgagtttaagttgagctcgggcatactgtccttt
tccatagtgaacgcaagcatgcgtcgtctgaagagcaccaatgagagctattatccattc
gaagagcccgatgattatgatgacgagagcaacgcaaccactgatgctttggtggttcat
atgttcgtggtgcaagctaagagtttgcaggaatgccaaattatttaccagccctgcaag
ccaacaagaagattgaatagcagcaagagcagcaagaaacgttctctgtccccagataat
ctgctccatgttacggagattaagcaggagccattgagcaactcgccgaattcgcataac
agcagcaccggcagcggctcgagcgctgtgccactggattctctttttggtaaatcaaaa
cgtaattcagttggctcggtagtgtcggttgctattgctgctgcggctgcaccatctgcc
atactgcaggaggctgcaaccacaaataaatcacgttcagcttcgccacagtatggcagc
aactattcgcagctgaatctcatgactccggatgcatttagcgctagtgcagcgagtatt
gtacttgtgaatcgagatggagctgagacgaacacaacaaccacgacagatcaatcggcc
atcaattcccaggtgctgcagacattgcggatgttggccacggtcacggccaagggtaca
gagtcagccaacagcaatcttttgaatttgatcaacaacacgcacattgaggatcgcgag
caacaaaagctgaaggagcaaacagatgctcgtaagaagtttatagccattgatcggaat
ccggaacgcaacgcagcggagaacttggcaagtggcggttccagtccaagtcgtgaagtg
caagagattatggcaacgcaagaggatacagatgactacgaaccggagctggaaaatctc
gaatatgatgaggataatccatattttatgatttgcaaaacagaaaataaaacggacaat
gagataaccaattcatcaacggtcgaggaagcagctacaacatcaaattggctgccacag
gatgcaaagctacccactaaaaaatcggctgaattgcaaaatgcggcccaaattatgtcc
caagcggtgcagcataaaaacaacggcaatgtaccgccaaccctgggcagcagcggcagc
aatagtaacaataacacggcaacaacattgaacagcagcaacaacaacaacagcagcaac
tgcagtcatcaaatagttgagagcgcaacagaagtgaatgcgaaactggaacaacttttg
gaactgataaaagcgcaatcactgcatcttactaaacttgagcacgagatcaacaaggtg
cagcagcaacaacagcaatacttgctgcaacaaccgagcggcactacagctgctgccttg
cagcccaagagcgtcaacgaactggcatacaaaatcgaaatgcaattatccaaactaatg
gagcaatatcttaagcgctacgagaacgagcacaaaaagaaactagccgagtttctgcac
gcacgtgagactcaaaatcgggagctgcgtgattcggtgctgcaagtgctaaatcaatat
gttatgaatcactttacggacattattggcaacgttttaaatatggagctgcagcggcag
ctgctgccacgtgtcaatgcgaaaatggatcaattgcagaatcaaatgcagctcgaaatt
gtgcagaaattaaatgtgattgacaagacggtaaaggaaaatatagcacaggtgtgcaaa
agcaagcaattcctggatgcctttggcaaatccgtgctaattggcgtgcagacaagtctg
cagacggcgttcatcgaatcaatgagcagcactctaatcccagcctacgagaagtcatcg
cagaatatgttcaaacagctacacgaggcattcagcgtgggcataaaagatttcatggtg
gaattcaacgcgtatctgcagcacataccgcagccgcataatggtgaagagttgagtaac
aaactcagcctcttaaagcagctggtggagacaaatctacttaagcatcgcactgagtta
accgatgtgatgctggagacacagcgcgaagtaaaaagcttagagatcctgctcgctcgc
cagatgcaggagaccatacgcactgagttgcgcaagcatatggataatcagagtatggca
ttacggtcccaggcagcaacgcccgcacccacatacgatttgcgagagagcataaaacaa
ttgttgctcgcgaatcatattaataaggccttccatcaggcattgctggccaatgatttg
aatctggtggaattcacattgcgaaatactgatcgaatgcaggtcttcgcgcccgatggc
tgtcgactcgagcaaaaggttttgctgtcgttaatacaacaaatatctgctgacatgagc
aaccacaatgagctgaagcagagctacctcaatgaagcgctgctggccattaatatgtcg
gatcccatcacacgtgagcatgcaccgaaagtgctatccgaactctatcgcaattgtcag
ctgttcattaagaactatcccaagagtccgcaatgcagcaatgtacgattgcttattgcc
atgtgcagtgcaacatatcgtgatcaatttaaatga
DBGET
integrated database retrieval system
