Drosophila navojoa: 108649356
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Entry
108649356 CDS
T05898
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
dnv
Drosophila navojoa
Pathway
dnv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108649356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dnv03400
]
108649356
DNA repair and recombination proteins [BR:
dnv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108649356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
RGS
FAM184
Fcf2
Vps53_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
108649356
NCBI-ProteinID:
XP_030242989
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MEGKSIVSRQEPVLRLDTNARRNFIKFHNKLGEKPSTTVRFYDQTDCYTVHGSDDCEQVA
KIVYKSTAYVHKLLPDDKQETLQFVAMSKPNFELAVRELLLVRNLRVEVYVKRDEWQLEY
RGSPGNLLQFEDILFANKEVLVGNSIISLQIKLEGGAQRRVGVAAVEQNDCQFQLFEFVD
DDFFTELEATVVLLGPKECLLPTADGEYAAVKAMLERNGVMITVPKRGSAAERNDLLQDL
NRLLRFAKGQQEDASGLKELQMQLAAEALRVAIKYLDLVNDAGNLGHYELKQLDLKRFVH
LDSAAVAALNIMPKPGTHPSMPSYRWQSILGVLDHCRTPQGHRLMAQWVKQPLRSAEILN
DRHDIVQCLLESPETLDTLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKI
LQVLLSLGHSTVQSVLCAPFKGFLEDLTGLKQMVEQVVDFEAIEKGEYLVKSTFDGRLMD
LQQTMTELYNKMERIRDKCSEELDLDGKLIKLENVAKLGYHLRTTIKDDSVLRKNKNFRI
VDVIKGGVRFTSDKLEGYADEFTSLRARYEEQQQSIVEEIIQVAVGYAAPLTSLNNELAQ
LDCLVSFAVAARSAPTPYVRPKMLPEGAGQLLLEDVRHPCLELQEHVSFIANSVEFEKDK
CNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSLAKISMVDSILGRVGASDNIIKG
LSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFA
THFHEITKLAETLPTVKNCHMAAVADEDNFTLLYQVRPGVMEKSFGIQVARLANFPEQVV
QNAQEVYNEFEDEHAGKQNEADKALLDKIQVAIEQLSTAGNNTEINVEDLTQLVAQFAKD
IKQLDSDYFKTVLTSSSET
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaatcaatagttagcagacaggagccggtgctgcgcttagatacaaatgcg
cgtcgcaattttataaaattccacaacaaactcggcgagaaaccgagcacaacggtgcga
ttttatgatcaaaccgattgctatacggtgcacggcagcgatgactgcgaacaggtggcg
aaaattgtttacaagtcaacggcgtatgtgcacaagctgctgccggacgacaaacaggag
acactgcagttcgttgccatgtccaagcccaactttgagctggccgtgcgtgagctgctg
ctcgtgcgcaatttgcgtgtcgaggtttatgtgaagcgcgacgaatggcagctggaatat
cgcggttcgccgggcaatctgctgcagttcgaggacattctgtttgccaataaggaggtg
ctcgtgggcaatagcattatttcgctgcagatcaaactggagggcggtgcacaacggcgt
gtgggtgtggctgctgtggagcagaacgattgtcaattccaattgttcgaatttgtggac
gatgatttctttaccgaactggaggccactgtcgtgctgctgggccccaaggaatgcctt
ctgccaacagccgatggtgaatatgccgctgtaaaggccatgctggagcgtaatggtgta
atgatcacagtgccgaagcgaggcagcgctgctgagcgcaacgatctactgcaggacctg
aatcgtctgctgcgctttgccaagggccagcaggaggatgcgagcgggctgaaggagctc
caaatgcaactagcggccgaagcactgcgcgtggcaatcaaatatttagatttggtcaac
gatgccggcaatttggggcactacgagctcaagcaattggatttgaagcgcttcgtccat
ttggactccgctgctgtggccgcccttaacattatgcccaagccgggcacacatccgtcc
atgccctcgtatcgctggcagagcatattgggtgtcctggatcattgtcgcacgccgcag
ggtcatcgtctaatggcgcagtgggtgaagcagccgctgcgcagcgccgagatactcaat
gatcggcacgacattgtgcagtgtctgctggagtcgcccgagacgctagatacgctcagt
ctggactatttgaagcgtataccagatattctaatgctcactaaaaaactgatgcgccgc
aaggcgaatttgcaggatctgtttcggatttatcaagttatattgcgcacaccgaaaatc
cttcaagtgctgcttagccttgggcacagcacagtacagagtgtgctctgtgcgcccttt
aagggttttctggaagatctgacgggcctcaagcaaatggtcgagcaggtggtcgacttt
gaggccattgagaagggcgagtatttggtcaagagcaccttcgatggtcgcctcatggat
ctacagcagaccatgacggagttgtataacaaaatggaacgcattcgggacaaatgcagc
gaggaacttgatctggatggcaagctgatcaagctggaaaacgtggccaagttgggctat
catttgcgcaccacaatcaaagatgattcggtgctgcgcaagaacaagaactttcgcatt
gtggacgtgatcaagggcggtgtacgattcacctccgacaagctggaaggctatgccgat
gagttcaccagcttgcgtgcgcgctacgaggagcaacagcagtcaattgtcgaggagatt
atccaagtggctgtgggctatgccgccccattaacttccttgaacaatgagctcgcccag
ctggattgtttggtcagttttgccgtagctgcacgaagcgctccaacgccttacgttcgc
ccaaagatgctgcccgagggcgccggccagctgctgctggaggatgtgcgtcatccatgt
ttggagctgcaagagcatgttagctttatagccaacagtgtggagtttgagaaggacaaa
tgcaacatgttcatcataaccggtccaaatatgggcggcaagagcacctatatacgctct
gtcggcacagctgttctaatggcccacgttggcgcctttgtgccctgcagtctggctaag
atcagcatggttgactccatactgggacgcgttggcgccagtgataatatcattaagggc
ctcagcacgtttatggtggaaatgattgaaacttcgggcattatcaggaccgcaacggac
aaatcgctggtgatcatcgacgagctggggcgtggcacatccacgtacgagggctgcggc
atagcttggtccatagccgagcatctggccaaggaaacgaagtgcttcacgctcttcgcc
acgcactttcacgagataaccaagctggcggaaacgttgcccacggtgaagaactgtcac
atggcggccgtggccgatgaggataattttacgctgctctatcaggtgcgacctggcgtc
atggagaagagctttggcatacaggtggcacgcctggccaattttcccgagcaggtggtg
caaaatgcccaagaggtgtacaacgaattcgaggatgagcatgcgggcaagcaaaacgag
gcggataaagcgctgctggacaagatacaagtggccatcgagcagctatcgacggctggc
aacaacacggagatcaatgtggaggatctgacccagctggtggcacaattcgccaaggat
attaaacagctggacagtgattatttcaagaccgtattaactagcagcagcgaaacttag
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