Drosophila navojoa: 108649597
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Entry
108649597 CDS
T05898
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dnv
Drosophila navojoa
Pathway
dnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108649597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108649597
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108649597
mRNA degradation factors
5'-3' decay
Decapping complex
108649597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRM_STIL
Motif
Other DBs
NCBI-GeneID:
108649597
NCBI-ProteinID:
XP_030244693
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
FAISAPPGFLATPQTPPPRPNIGFHGPHQMGGSSAGPGLMPTPQPQHQQLNGITGNRAPP
GFMYPTGPATNLPQHPLLQQHVLPPNFPRPLPNPHLPTALNNFAMHPSFNAMRAVGMHPA
AYMQPVLPPRLPPHNLLNQQPNSMYNMFNMRLVQEIQQNHPLLQNAAVARQQQQLSRPGD
RQKQQQLLPQQMQQQQQQQQQMNRYSGNLPQEEFDEYANLMSTRDKHWLIGIQLSQLNTD
TPYIDDYYYTVYKERKNGQVRHSQAHKDNQLNHPLTQPRGHAQLIMVQLGNKNGSRNGQQ
HRERRNSDNTSSSNTSGITNSGNNSNILSGYVFSPLKFENSLGKLQYGSVTAPRKIIDAE
IMGSDSATADNAVVVSSVARQSSDKNNEGQPEVVLVPSSMRKSRHILLHIETLYRYLLKL
EDLESPEVMATIILKKKKESERIAAVEQLEMANKTPEERAAEANNPQSMNPALKNKFNYE
IEPRDVLVCKLKAGLTFNKVVSMMNVRKGKILLRRIMPFIADQPIRWTVWGGVFCSLQNV
VKKDREDVDGCLFALYPEFKNQIHEANLETIINISTAFTMNDKKMSGIFCSRFGILSLVG
LILRVEAIYVSNTDLTLTEESRQKWREFLAQVASCLNRTIQNQTISAAIESDAIQPMMNH
FARFKDLKLDALLALITQAKHQIN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
tttgctatttcagcacctcctggatttttagccacgcctcaaacgccgccgccaaggcca
aatataggttttcatggaccgcatcagatgggcggatccagcgcagggccaggtctaatg
cccacgccgcagccacagcatcaacagctaaatggcatcactgggaatcgtgcgccgccc
ggatttatgtatccaactgggccagctacgaacctgccgcagcatcccctattgcagcag
catgttttgccgcccaattttcctcgcccactgccaaatccacatctgcccacggcgctc
aacaactttgccatgcatcccagtttcaatgcgatgcgcgccgttggcatgcatccggca
gcctacatgcagcctgtgctgccgccccgcctgccgccacacaatctgcttaatcagcag
cccaactcgatgtacaacatgtttaacatgcgactggttcaggaaattcagcagaaccat
ccgctgctgcagaacgcggcagttgctcgccagcagcagcagctcagtcgacccggcgat
cgccaaaagcagcagcagctgcttccgcagcagatgcagcagcaacaacagcagcagcag
caaatgaatcggtatagcggcaacctgcctcaggaggagttcgacgagtatgcgaatctg
atgagtacgcgcgacaagcattggctgattggcatccagctgtcacagctgaacacggac
actccgtacattgacgactactattacacggtgtacaaggagcgcaaaaacgggcaggtt
cgtcacagtcaggcacacaaggacaaccagctgaatcatccactgacgcaaccgcgaggt
catgcgcagctcattatggttcagttgggcaacaaaaatggctctcgtaatgggcagcag
caccgcgaaagacgcaactcggacaacacgagcagcagcaacaccagcggcatcacaaac
agtggcaacaacagcaacatcctctctggatatgtgttctctcctctgaagtttgaaaac
tctctgggcaagttacagtatggaagtgtgacggcgccccgcaagattattgatgctgag
atcatgggcagtgacagcgcaaccgctgacaatgctgtggtggtatcgtcagttgctagg
cagagctcagataaaaacaatgagggccaacccgaggtggtgcttgtgccgagcagcatg
cggaaatcacgacatattttgctgcacatagagaccctatataggtatctgctcaagttg
gaggacctggagagtccggaggtaatggcaaccattatattaaagaagaagaaggagagc
gaacgcattgccgccgtggagcaactcgagatggcgaataaaacgcccgaagagcgagcg
gctgaggcgaataatccacaaagcatgaatccagcgcttaagaacaaattcaactatgaa
attgagccacgcgatgttttagtgtgtaagctgaaagcaggtctcactttcaataaggtt
gtatcgatgatgaacgtgcgcaagggcaagatactattacgccgcataatgccatttatt
gctgatcagccgatacgttggacagtgtggggcggagtattctgttcactgcaaaatgtc
gttaagaaggatcgagaagatgtggatggctgtctctttgcgctttacccggaattcaaa
aatcaaatacatgaagcgaatttagaaacaattatcaacatttcaactgcgtttaccatg
aacgataaaaagatgtcgggcattttttgtagtcgctttggcattctgtcgcttgttgga
ttgatactacgcgtggaggcgatctacgtttcaaacaccgacttaacgcttaccgaggag
agccgacaaaagtggcgtgagtttcttgcgcaagttgcttcctgtcttaaccgcaccatt
cagaatcaaaccatctcggcggctattgagtcagatgcgattcaaccaatgatgaatcac
tttgcgcgtttcaaggacttgaaactagatgcgcttctagctttaattacacaagctaaa
catcaaataaattaa
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integrated database retrieval system