Drosophila navojoa: 108649638
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Entry
108649638 CDS
T05898
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
dnv
Drosophila navojoa
Pathway
dnv04382
Cornified envelope formation
dnv04512
ECM-receptor interaction
dnv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108649638
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108649638
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108649638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dnv04147
]
108649638
00536 Glycosaminoglycan binding proteins [BR:
dnv00536
]
108649638
Exosome [BR:
dnv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108649638
Glycosaminoglycan binding proteins [BR:
dnv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108649638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108649638
NCBI-ProteinID:
XP_030243738
LinkDB
All DBs
Position
Unknown
AA seq
1910 aa
AA seq
DB search
MMLLPRDLTGLSGVLGAVWLFASVVSFANAAKECNTTLCDCKGIKGRIGGFGFKGVPGRE
GSPGDVGPPGPPGRVGEKGDFGEYGETGEKGHRGDIGYQGLNGLPGAPGFPGDDGTAGPR
GIDGCDGRPGDQGIPGTPGENGARGPMGKTGPPGETGDAGEGGINSKGTKGSIGVRGADG
VDGQPGFPGPTGYKGDIGFAGAQGHKGEQGPKGYKGEMGVPESYPMLQGVVGDKGEPGEG
EPGALRYDETLKGYKGFAGPRGDQGPPGMPGEPGPVGRSGLPGPRGEMGERGERGKPGRD
GVQGSPGEKGMKGSPGYSGENGEDGRPGERGEDGFDGTPGVQGPEGPPGVYDPTLDKSLP
GPVGPQGDLGPPGNPGLNGIPGKQGRRGPHGPPGPPGEQGLSGNRGPPGRSQKGEQGDYG
LMGPPGPQGPPGVAGPPGRTGFPGNPGLDLYGPKGQAGQNGIPGVDGYRGDRGEVGITGD
KGLPGEGLNIVGPPGSQGPPGKRGIPGIDGAPGFRGRPGDKGIRGDDCGICHAGPRGMKG
VIGDAGYPGEHGARGMAGITGARGPKGIRGRPGVPGHQGIRGTDGIPGEVGRPGKQGPPG
RVEYTGSLRETEKGDSGDNGRRGDQGQQGDRGEDGWPGVPGAKGEPGLRGDFGDAGRPGK
DGLPGIDGRDGKPGTPPSTPKFYLTGEPGYNGKKGVRGDIGSPGFKGDKGEPHPGEIIEN
RGEPGDVGYPGEPGFRGPKGETGEPGLKGIMGDMGLPGEVFQGPPGAKGYKGEIGDYGPH
GMPGKPGRDGEPGLPGLDGPKGFRGEPGQYILPGEIGVPGRPGVKGIIGDEGPIGYPGPR
GPPGPKGIKGVLGDNGLEGLRGLPGNKGQRGDIVVGPPGRQGEPGRPGSIAPHGVKGQKG
EVGPRGQVGQNGAKGSIGYPGRRGPIGDAGVPGYPGEPGPAGLDGIPGEQGDRGDIGFDG
RIGDIGPRGLVGEFGPKGLQGEIGPFGYPGIPGVPGTKGVQGDQGVPGRRGAKGVSAYSG
IKGDQGDPGWQGPPGYNGPMGFKGQRGEPGDSMPASDGLPGPKGEVGAPGRNGLPGLDGL
KGQRGDTGYTGQPGIVGDQGDDGPNGYPGRNGLDGLKGEAGEIGLPGLPGEIGDIGDVGY
PGQHGIQGDEGLPGEYGQIGNRGEIGDRGDIGDAGEVIYIGSQTDMRGPPGDNGLRGLQG
PTGPPGMIGAIGYPGPRGERGDIGFEGPAGLDGLPGPKGERGDKGLRGLIGERLIAEPGE
EGDIGYDGLPGRPGTPGQKGAPGEQGENGLNGAQGPQGPMLIGPQGPPGDYGYQGIPGRN
GLHGMRGRKGERGDIGRKGEMGETGFSIWGQQGDIGERGPQGALGYNGAKGEEGASGRPG
RTGSVGTRGPRGPLGDAGWSGIDGVDGLPGEKGEPGVTYSYTYARPGDRGEPGLDGFKGE
RGDIGPPGLHGAAGLRGIVGYRGDDGEMGYQGPDGVKGQRGDIGEIGLRGRPGLRGLPGP
QGDPAAPPPPPKSRGFIFARHSQSVNIPTCPANTNMLWEGYSLSGNVASSRAIGQDLGQS
GSCLMRFTTMPYMFCDFNNVCNYAQNNDDSLWLSTAEPMPMSMTPIQSRDLMKYISRCVV
CETSTRVIALHSQSMSIPDCPGGWEEMWTGFSYYMTTLDNTGGVGQNLVSPGSCLEEFRA
NPVIECHGHGRCNYYDALASFWLAVIEKQDQFVQPRQQTLKADQTSKISRCTVCRRRGDS
FYTVKRTSASQSSYSSGSSSGSNSGYSTGYNTGSNSGYSTGYNTGSNSRDNSAIRSGSSW
STNAGANLGADSRSGGAGYGFNSGSGSGSNAGFSSSSWSTGGRQQPPNSYSTWSGGYPAA
EYRAQPQTLRQPQPLPPTGQYNRQQTYRNPYQYGGVRQNRRYPRDDTNAP
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgttgcccagagatctaacgggtctctcgggtgtgcttggcgcagtctggctg
tttgccagcgttgtgtcctttgcgaatgcggcaaaggaatgcaatacaacgctgtgcgac
tgcaaaggcatcaaaggacgtataggcggctttggttttaagggtgtgcccggtcgtgag
ggttcgcccggtgatgtgggtccgcctggtccgcccggacgtgtcggcgaaaaaggcgat
ttcggtgaatacggcgaaacgggcgaaaagggacatcgcggtgacattggctatcaaggc
ctgaatggtttgccgggcgctcccggctttcctggtgatgatggaactgccggaccacgt
ggtatcgatggttgcgacggtcgtcctggcgaccaaggaattcctggtacgcctggtgag
aatggagctcgtggcccaatgggcaagacaggcccgcctggtgaaactggtgatgctggc
gaaggcggcatcaactccaaaggaaccaagggtagtattggcgtgcggggagctgatggc
gtcgacggtcagcctggttttccaggccctaccggctacaaaggcgacattggcttcgct
ggcgctcagggccacaagggtgagcagggaccaaagggctataaaggtgagatgggcgtg
ccggagagctatccaatgttgcaaggcgtcgtgggcgacaagggcgagcctggcgagggc
gagcctggagctttgcgctatgatgaaactctcaagggctataaaggctttgctgggcca
cgcggtgatcaaggaccgcccggcatgccaggcgagccaggaccagtaggacgcagcggc
ttgccaggtcctagaggcgaaatgggcgagcgtggagagcgaggaaagcctggtcgtgat
ggcgtacaaggcagccccggcgaaaaaggcatgaagggctcacctggctacagtggcgag
aatggcgaagatggtcgaccaggcgaacgtggtgaggacggcttcgatggcactcccggt
gttcagggacccgaaggaccaccaggtgtctacgatcccaccttggataagtcgctgccc
ggtccagttggaccacaaggcgatcttggaccccctggtaatccaggcttaaatggcata
cccggtaagcaaggacgtcgcggtccacatggaccacctggaccacctggtgaacaagga
ctgagtggcaatcgtggcccaccgggacgcagccagaaaggcgaacaaggtgactacgga
ttgatgggtccacccggtccacaaggtccacccggagtggctggacctcctggccgcact
ggattccctggcaatccaggtctcgacctctacggaccaaaaggtcaagctggtcagaat
ggaattcctggcgtcgatggctatcgcggagatcgtggagaagtcggtataaccggtgac
aagggcttgcccggtgagggattgaatattgttggaccacctggctcgcaaggtccacct
ggcaaacgtggtatacccggaatagacggtgcacccggcttccgtgggcgtcctggtgac
aaaggcatacgaggtgatgactgtggcatttgccatgccggaccacgtggcatgaagggc
gtaataggtgatgctggctacccaggcgaacacggtgcacgcggcatggcgggcatcacg
ggcgctagaggacccaagggcattcgtggcagaccaggtgtgcctggccatcaaggtatc
agaggtacagatggcattcctggtgaggtgggtcgccccggcaaacaaggtccgcccggc
cgtgtcgagtacaccggcagcttaagagaaacagaaaagggcgatagtggtgacaatgga
cgccgcggtgatcaaggtcaacagggtgatcggggagaagatggctggcccggcgtgccc
ggagctaaaggagagcccggacttcgtggtgacttcggtgatgccggtcgtcccggcaag
gacggattaccaggtattgatggacgcgatggtaagccaggtacaccaccatccacacca
aagttttacttaacgggcgaaccaggctacaatggtaaaaagggcgtacgtggtgatatt
ggcagccccggcttcaagggtgacaaaggtgagccacatcctggtgaaataattgagaat
cgtggcgagcctggtgatgttggatatccgggagagcctggcttccgtggacccaaggga
gagactggcgagccgggtctgaagggcataatgggtgatatgggattacctggtgaagtg
ttccagggacccccaggagccaagggctataagggtgaaataggtgactatggtccacat
ggtatgcccggtaagccgggtagggatggtgaacccggcttgccaggattggacggccca
aaaggtttccgtggcgaacctggtcaatatattcttcctggagaaatcggtgtgcccggc
cgaccaggcgttaagggcatcattggagatgagggacccataggttatcctggcccaaga
ggcccgcccggaccaaagggtatcaaaggagtgcttggagacaatggcctcgagggcctt
aggggtttacctggtaacaagggacagcgcggcgacattgtcgttggacccccaggacga
cagggtgagcctggtcgtccaggcagcattgccccacatggagttaagggtcaaaagggt
gaagttggacctcgtggacaagttggtcagaatggcgccaagggcagcattggatatcca
ggtcgtcgcggtcccattggcgatgcaggtgtgcctggatatccgggcgagccaggaccc
gccggcttagatggtatacccggtgagcaaggagatcgtggagatattggatttgatgga
cgcattggagatattggtccccgcggccttgtcggcgagttcggtcctaaaggtcttcaa
ggggagattgggcccttcggatatccgggaatcccgggtgtacctggtactaagggcgtg
caaggtgatcaaggtgtacccggacgtcgcggcgctaagggtgtctccgcttacagtggt
atcaaaggtgatcaaggcgatcccggatggcaaggaccacccggctacaatggaccaatg
ggctttaagggccaacgtggtgagccaggcgattcaatgcccgcctctgatggtttgcca
ggtccaaaaggcgaggttggtgcgcctggtcgcaatggtttgcccggcttggacggtctg
aaaggacaacgtggggatactggatatactggccaaccaggaattgttggtgatcaaggc
gatgatggcccgaatggctatcccggacgcaatggccttgacggccttaagggtgaggcc
ggagaaataggcctccctggtttacctggagaaattggagatattggcgatgtcggctat
ccaggccaacatggaattcagggcgatgaaggattaccgggtgaatatggtcaaattggc
aacagaggcgaaatcggagatcgtggtgatatcggtgacgctggtgaggtcatttatatt
ggctcccaaactgatatgcgaggtccgcctggagataatggattgagaggacttcagggg
ccaacgggtccacctggcatgattggtgctattggttatcctggtccacgtggagagcgg
ggtgatatcggattcgagggtcctgctggccttgatggtctaccaggcccgaaaggcgag
agaggagacaagggcttgcggggtttaatcggcgaaagactcattgccgagccgggtgaa
gagggtgacattggctacgatggcttgcctggacgtccgggcactcctggccagaagggt
gcacctggtgagcagggtgaaaacggcttaaatggagcgcaaggaccacagggaccaatg
ctcatcggaccccaaggtccgcccggagattatggctatcaaggcatacctggacgtaat
ggcctgcacggcatgaggggaaggaaaggagagcgtggcgacataggacgcaaaggtgaa
atgggtgaaaccggcttcagcatttggggtcaacagggtgacataggcgaaagaggtccg
caaggtgcgcttggctacaatggcgcaaagggcgaggaaggtgctagtgggcgaccaggc
cgcactggctcagtcggcacacgcggaccacgcggcccacttggcgatgcaggctggagt
ggcatcgatggtgttgatggactaccaggcgaaaaaggtgaaccaggagttacctattcg
tacacttacgcccgacccggcgatcgtggcgagcccggcttggatggcttcaagggtgag
cggggcgatattggaccacctggcttgcatggagcagcgggtctccgtggcatagtcggc
tatcgaggtgatgatggtgagatgggctaccaaggaccagacggcgttaaaggccaacgc
ggcgatattggcgaaatcggtctaagaggacgcccgggtctacgcggtctgcccggccca
caaggtgacccagctgcaccaccacctccacctaagagccgtggcttcattttcgcccga
cattcgcaatccgttaatatacccacgtgcccagccaatacaaatatgttgtgggagggc
tattcgctgtcaggcaatgtggccagcagtcgcgctatcggccaagatttgggacaatcc
ggctcttgtcttatgcgctttaccaccatgccctacatgttctgtgacttcaacaacgtt
tgcaactatgctcagaacaatgacgacagcttgtggctatctacagctgagcccatgccc
atgtccatgacgccaatccaatccagagacctcatgaagtatatttcacgctgtgtcgtt
tgcgagacttcaacgcgcgtgattgccctgcattcgcaatccatgtccattccagattgt
ccaggtggctgggaagagatgtggacaggcttcagttactatatgacgaccttggataat
acgggtggtgttggccaaaacttggtctcacccggctcctgcttggaggaattccgtgcc
aatcctgtcatcgaatgccatggccatggacgttgcaattattatgatgctttggcctcc
ttctggctagccgttatcgagaaacaagatcagttcgtgcagccacgccagcaaacccta
aaggctgatcagaccagcaaaatcagcagatgtactgtgtgtcgccgtcgtggcgatagc
ttctacactgtcaagcggacttctgcatcccagtccagctatagctccggctccagttcg
ggctcaaactcgggctacagcacgggttacaacacgggctcaaactcgggttacagcacg
ggctacaacactggctccaactctagagacaactctgccatcagatcgggctccagctgg
tcaactaatgctggcgccaatttgggcgcagactcgagatctggtggtgcaggttacggc
ttcaactctggctctggctctggctccaatgccggctttagttcgagctcctggtcaaca
ggaggcagacagcaaccaccaaactcctactccacatggtcaggtggctatccggcagcg
gaataccgtgcgcaacctcaaacattgcgtcagccacagccactgccgccaacgggccaa
tacaatcgtcaacaaacttatcgtaatccatatcaatacggcggagttcgccaaaatcgt
cgctatccgcgcgatgatactaacgctccttag
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integrated database retrieval system
