Drosophila navojoa: 108649640
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Entry
108649640 CDS
T05898
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
dnv
Drosophila navojoa
Pathway
dnv04382
Cornified envelope formation
dnv04512
ECM-receptor interaction
dnv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108649640
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108649640
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108649640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dnv04147
]
108649640
00536 Glycosaminoglycan binding proteins [BR:
dnv00536
]
108649640
Exosome [BR:
dnv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108649640
Glycosaminoglycan binding proteins [BR:
dnv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108649640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108649640
NCBI-ProteinID:
XP_017954101
LinkDB
All DBs
Position
Unknown
AA seq
1783 aa
AA seq
DB search
MLPHWKRLLFAAVIAGALVGTNAQFWTNPGATGSIHESLRHQTRDEPRDTFSIDESYDIV
DSASIQRGAPLPKNCTAGYAGCVPKCIAEKGNRGLPGPEGQTGPKGLQGYPGPEGPPGDK
GQKGDPGPFGARGQKGERGTRGIPGLPGVAGVQGPAGNPGAPGLNGKDGCDGTAGLPGLP
GLSGMVGPRGYTGGPGPKGEKGEPAKENGDYAKGEKGEPGFAGRSGAPGPEGERGEKGQR
GDTGPYGPPGPRGDRGIKGEKGAACFATAMPGEKGDKGEKGDPAPKLPVHGSDTVMGQRG
DVGQKGEMGYRGEKGGLGPAGEPGLDGPKGEKGVPGFVGDRGRPGNFGPTGPAGQKGDRG
ETGLNGLPGLPGMKGEPGRPGKPGERGLVGPAGPPGGGRGQPGAPGPKGPRGYSGPPGPQ
GLNGMDGPQGPQGYMGPKGGPGLPGIPGNEGPAGQKGEKGIPGFVGSPGPVGPIGQNGPP
GLDGQKGEPGLPGYGIQGPKGDDGINGFPGQKGAKGERGYKGNAGVPGDSKLGRPGTPGP
AGIPGPQGDAGRPGIPGDKGDMGPKGDAGGKCSLCPPGAKGDKGERGVNGIPGNPGPRGP
PGERGYAGERGDDGIVGQTGPPGEKGLDGLPGAPGATGKPGNSAFVNLSQIIPEKGPKGD
PGYPGAPGVKGERGDSGIPGLPGAKGEMGVKGDKGYMGQPGTDGAPGARGRDGFDGFPGQ
SIKGEPGRSGVDGPKGDKGSSGYVGQKGEPGTCAASELKVPMKGNKGDRGPTGMPGPMGP
MGQKGEIGRNGEKGDTGPQGPPGLVGPRGITGPRGEKGNPGQYGAPGNDGKDGLRGPPGR
YGERGQKGEQGATVAGPPGPAGRDGLTGEKGDRGPVGAIGMIGPMGNPGYPGDKGDSGLP
GQPGATGALGQKGEPGPVGPEGRPGPPGIPGIAGVQGRDGAKGEPGSIGLVGMPGSKGER
GAPGNDGPKGLTGLAGAPGKRGPIGPAGMPGMKGDKGERGLTGNDGLPGSRGPTGPPGMM
GVKGDMGPRGLPGQDGLNGLPGEKGSQGLPGFDGPQGEPGDASEKGQKGEPGVSGLRGKD
GLPGAPGLPGEKGLPGIAVHGRPGPQGEKGDTGRDGLYGQDGMPGEKGDRGFNGPPGPKG
DKGNSGQPGSPGIPGRDGLPGPQGSPGPIGYPGAKGAKGDRGPAGVDGLKGAMGLPGRPG
YQGAPGLKGDKGEKGLRGPAAEVDLFALRGEKGTPGSPGLTGLPGLQGIKGNQGPAGYPG
EKGERGLTGPAGVPGLAGEPGPKGDMGLTGERGYPGPVVRGEKGLPGRAGKNGRPGVPGL
PGMKGERGLAGLPGNAGLVGLPGPIGPMGPKGERGLTGPPGIDGIAGMDGATGEKGDIGY
PGIKGDRGLPGLEGQKGDKGNTGPAGPPGLSGLTGLKGDTGAPGLPGHPGPAGAPGEKGF
TGPKGRDGRDGLPGLRGEKGEPGMIPPPGPKGEPGRPGRDGEKGDRGPQGERGLIGIQGE
RGEKGERGSIGLTGPVGRPGLKGDRGEQGLIGLEGEVGPMGFKGEPGLPCTGAQDYLTGI
LLTRHSQNDQVPQCAPGHVELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVMSCG
QNNVCNYASRNDKSFWLSTSAPIPMMPVNSQEISKYISRCVVCEAPANVIAVHSQSLAIP
NCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGHCHFYET
MTSFWMVTLEDNDQFSKPEQQTLKAGNLLSRVSRCQVCVKNSS
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgttgccccattggaagcggctgctgttcgccgctgtaattgctggagcattagttggt
acaaatgctcaattttggacgaatcccggtgcgactggctctatccatgagtcgctacgt
caccaaacacgagatgaacctagagatacgttttctatcgatgaaagttacgatattgta
gactcggcgagtattcagagaggcgcacctttgccaaagaactgcactgcagggtatgcg
ggctgcgtgcccaagtgtattgccgagaagggtaatcgtggtctgcccggacccgagggt
cagactggaccgaagggtctgcaaggttatccgggaccagagggtccgcccggtgacaaa
ggtcagaagggtgatccgggtccatttggagcaagaggtcagaagggtgagcgaggaaca
cgcggtattcccggtctgccaggcgttgctggcgtccaaggcccagctggaaatcctggt
gcaccgggtcttaacggcaaagatggttgcgatggcactgctggtttgccaggtctgcca
ggtctgtccggcatggttggtcctcgcggctacaccggcggacctggtcccaagggcgag
aaaggtgaaccagccaaagagaatggtgactatgccaaaggtgaaaaaggtgaacccgga
tttgctggacgctctggcgcccccggacccgaaggagaacgcggcgagaaaggccaacgt
ggtgacacaggaccttatggaccacctggacctcgaggtgatcgcggtatcaagggcgag
aagggcgctgcatgctttgccacagctatgcccggtgagaaaggtgacaagggcgagaaa
ggagatccagctcccaagcttcctgttcatggctccgatactgttatgggacagcgcggc
gatgttggccagaaaggtgaaatgggttataggggcgagaagggtggacttggacctgcc
ggtgagcctggacttgatgggccgaagggtgaaaagggtgtgcctggcttcgtaggagat
cgaggtcgcccaggcaactttggaccgacaggacctgctggacagaagggagatcgtggt
gagacgggtctaaatggattgccaggattacccggcatgaagggtgagccaggacgacca
ggtaaaccaggtgaacgcggtttggttggtccggctggacctcctggcggtggacgcggt
caaccaggcgccccaggacccaaaggacctcgtggctatagcggtcctccgggccctcaa
ggcctcaatggtatggatggtcctcaaggacctcagggctacatgggccccaaaggaggt
cctggcttacctggaattcctggcaatgaaggccctgccggacagaagggcgaaaaaggt
attcctggattcgtcggctctccgggtccagtgggaccaataggccagaacggtccacca
ggacttgacggacaaaagggtgagcctggcttgcccggctatggtattcaaggccccaaa
ggcgatgatggaatcaatggtttccccggacaaaagggcgctaaaggcgaaagaggctac
aagggtaatgctggtgttcccggagattcaaaattaggcagacctggtacccctggtcca
gctggtattcctggcccacagggtgatgctggtcgtcctggcatacccggtgacaaaggc
gacatgggtccaaaaggtgatgcaggtggcaaatgttctctttgcccacccggcgctaag
ggagacaaaggcgagcgtggtgtgaatggcatcccaggcaacccaggcccgcgtggccca
ccaggtgaacgaggctacgctggcgagcgtggtgatgatggcattgttggacaaacagga
cctcctggcgagaaaggccttgatggtttgcctggtgcacctggtgcaacaggaaagcct
ggcaactctgcgtttgttaacttgagtcaaatcatcccagagaaaggccccaaaggagac
cccggatatccaggagctcctggcgttaagggcgaacgtggtgatagcggaatacctggc
ttgcctggtgctaaaggcgaaatgggtgtcaaaggcgacaagggttacatgggccagccg
ggcacagacggtgctcctggtgctcgtggacgtgatggttttgatggcttccctggacag
agtatcaagggagaaccaggccgctctggtgtggatggccctaaaggtgacaagggtagc
tctggatatgtgggacagaagggtgagccaggcacttgcgcggctagtgaactgaaagta
cccatgaaaggtaacaaaggcgaccgtggtcctacgggtatgcctggaccgatgggacca
atgggccagaagggcgagattggcaggaacggtgagaagggtgacacaggtccacaaggt
cctcctggtttggttggccctcgtggtatcaccggacctcgcggcgaaaaaggaaaccca
ggccaatatggtgcgcccggtaacgatggcaaggacggacttcgcggaccacctggtcgt
tatggcgaacgcggacaaaagggtgaacaaggtgctactgtggctggaccacccggtcct
gcaggtcgcgatggtttgacaggcgagaagggagatcgcggcccggttggtgctattggc
atgatcggtcctatgggcaatcctggctatcccggagacaagggcgattctggtttgcct
ggtcaacctggtgccactggcgctcttggacagaaaggagaacctggcccagtcggaccg
gaaggtcgccctgggccacctggtatacccggcattgctggtgtccaaggtcgtgatggt
gccaagggagagcctggcagtattggtctcgttggcatgcctggtagcaagggcgaacgc
ggtgcacctggcaacgatggtcctaaaggtctaactggcttagctggtgctcccggcaaa
cgcggtcccattggacctgcaggaatgcccggtatgaagggtgacaaaggcgaacgtggc
ttgactggcaacgatggtctgcccggcagtcgaggaccgactggaccacccggcatgatg
ggagttaagggagacatgggcccacgtggcttgcctggacaagatggtttgaatggtttg
cctggagagaagggtagccaaggtcttccaggttttgacggacctcagggagagccgggc
gatgcttccgaaaagggacaaaagggtgagcccggtgtctccggactgcgtggtaaagat
ggattacccggtgcccctggactaccaggcgagaaaggattgcctggaattgctgtacac
ggtcgaccaggcccacagggcgaaaagggtgatactggacgcgatggactttacggacaa
gatggtatgcccggtgagaaaggtgaccgtggtttcaatgggcctcctggtccaaagggt
gacaaaggcaattctggacagcctggcagtcctggaattcctggccgcgatggtttgcct
ggaccacaaggcagtcctggaccaatcggctatcctggcgccaagggtgccaagggagac
cgtggtccagcaggcgttgatggactaaaaggcgcaatgggtcttccgggcaggcccggt
taccaaggagcacctggattgaagggcgacaaaggcgaaaaaggtctcagaggtccagca
gctgaagtcgatctgtttgcattaagaggagaaaagggtacgcctggcagccctggcttg
actggtttgcccggacttcaaggcatcaagggtaaccaaggcccagctggctaccccggc
gagaaaggagaacgaggcttaacaggaccagccggtgttcctggcttggctggagagcct
ggacctaagggcgatatgggcttgaccggtgagcgcggctatccaggacctgttgtccgg
ggagagaagggtctgccaggacgtgctggtaaaaatggacgcccaggtgttcctggcttg
cctggaatgaagggtgagcgtggcctagccggcttgccaggtaatgctggtctagtcggc
ttgcctggtccaattggtcccatgggccccaaaggtgaacgtggtttgactggcccacct
ggcattgatggaatcgctggcatggatggcgcgacaggcgaaaagggtgacattggctat
cccggcattaagggtgatcgcggccttcccggcttggaaggccaaaagggtgacaagggc
aacacaggacctgccggtcctcctggtttaagcggcctaactggtcttaagggcgatact
ggcgctcctggcttgccgggccatccaggtccagctggcgcaccgggcgagaagggcttc
accggcccaaagggtcgtgacggtcgcgatggtcttcctggattgcgcggcgagaagggc
gagcctggcatgattcctccacccggccctaagggcgagcctggtcgtcccggtcgtgat
ggcgagaagggcgaccgtggaccacaaggtgaacgcggtcttatcggtattcagggcgag
cgtggcgagaagggtgaacgcggctcgattggcttgactggtccagttggccgaccaggc
ctcaagggcgatcgcggtgaacaaggtttgattggtctggaaggtgaggttggtcccatg
ggcttcaagggtgagcccggcctgccctgcactggcgcacaggattatctcactggcatt
ctactgacgcgccacagccaaaatgatcaggtgccacagtgtgctcctggacatgtagaa
ctctggacgggctactcattgctttacgtagatggcaacgactacgcacacaatcaagac
ttgggctcacccggctcctgtgtgccacgcttctccacattgcccgtgatgtcctgtgga
cagaacaacgtttgcaactatgcatcgcgcaacgataagagcttctggctatccacctca
gcgcccatacctatgatgcccgtcaatagccaggagattagcaaatatatttcaaggtgc
gtcgtctgcgaggcaccagcgaacgtcattgccgtgcacagccagtcgctggcgataccc
aactgccccaatggctgggaaggactatggattggctacagcttcctcatgcacacggct
gtgggtaatggaggcggtggtcaggctctgcaatcgcctggctcctgcttggaggacttc
cgtgccactccattcattgagtgcaacggagctaagggacactgccatttctatgagaca
atgaccagcttctggatggttaccctagaggataacgatcagttcagcaaacccgaacag
caaacgctcaaagcaggcaatttgctttcacgtgtatccaggtgtcaagtctgtgtgaag
aactcgtcataa
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integrated database retrieval system
