KEGG   Drosophila navojoa: 108649824
Entry
108649824         CDS       T05898                                 
Name
(RefSeq) zinc finger protein swm
  KO
K13192  RNA-binding protein 26
Organism
dnv  Drosophila navojoa
Brite
KEGG Orthology (KO) [BR:dnv00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dnv01009]
    108649824
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dnv03019]
    108649824
   03041 Spliceosome [BR:dnv03041]
    108649824
Protein phosphatases and associated proteins [BR:dnv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108649824
Messenger RNA biogenesis [BR:dnv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     108649824
Spliceosome [BR:dnv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    108649824
SSDB
Motif
Pfam: Nup35_RRM_2 RRM_Nup35 PWI zf-CCCH RRM_1 zf_CCCH_4 GatC
Other DBs
NCBI-GeneID: 108649824
NCBI-ProteinID: XP_030243490
LinkDB
Position
Unknown
AA seq 1115 aa
MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKDLKRIMIEQLDVFLSEE
TTRFVDRLFDAIASEEYLSMPTPMPVTTANIAELELEPDLDGVADIEAVVNLSPPTPPST
TASKDIVIKADSNQEHLRSDNCSREIAIDASSAPMPTDANTTGTHSTKITFDHKTKDSHS
QQQQLMHHHHSSTSGGGSVNASGFVRSASPPLRSSGPAGAYAADKENQPRDSRRRRASLR
SRSRSRSRSNERSFRRSRSRDRRINEREKSQRQFRNKSPPGGTSEQRHRRSNNNNSTNST
NNFDRRRIGNNNSSNNNSSMDERTQRFGKSRHSPRSRSISPESRNVRRGVNINSNNVNNS
ANSMEAAACSTAAVVAPAVPMPLPVSHPVAAMGRQRCRDFDEKGYCVRGETCPWDHGINP
VVFEGINNSALMMSMREYNPDAPEIWARGGPAGVPGVPQPGGGPPQALPVPPQGGPSNIN
PFSGNVRSCAPHGVPNPADYARQPGQPPQVPAPPPMMSFPFNPTAVTTPLQRQLIPIPVM
DGGVGGGVGGGGGGGLAADMGKRRFELEDSVAIADVPSKMRKLPINSRLGPRVNPNMQQH
NSSLELRKVPRGLNTIAHLNNHFAKFGKIVNIQVSYEGDPEAAIVTFSTHAEANVAYRST
EAVLNNRFIKVFWHNDNSNSSSINNNNSNNIINDSGNPNVNRKSQYHLHNVPAMPTPNAD
SAKITNTSNNNSQPNQSTPLVDTNNALAAPTTEQGLAITAAPASMRLKLNANATAANASA
TGGARALTPAVNAASIRKKQEEQQKAMHQLANGLRKRKQELLQSYVKQMKTALELVERMD
QQDAQRAPTLETIKVLQATIDKLRKDVHADQDQLQAQIQQQHQQQQQTLPVKKTKEQQKK
ELLDMELELIAQQQEGNDTTAIQKRLEELQRTLSASTGGGSLSGGGGAKLPGGGARKRAT
YPEGPTRVDRRPKAIVVTGFAAEEADFVLGHFKHFGEISKHDVDREIPQLIISYATRLNA
EQAVLRGKIYKDKRLQISWAPVVSTPAVVPMGAPADKSPGALISSTTGDKLDNPKQLLHS
SVSESESLLGSDTLPELRLEDEEEDEESEDRSWRR
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgatattggaaaactcggataagctcaaggattggctgagcgttgtgctcgagccactc
tgtgatgctgactcctcggctttggcgcgctatgtaattgcgttgctgaaaaaagacaaa
tcggataaagatctcaaacgcatcatgatcgagcaattggatgtgtttctttcagaggag
acgacacgattcgtcgatcgtctatttgatgcgattgccagcgaagagtatttatcaatg
cccactccaatgcccgtaacaacagctaacattgctgaactggagctcgaacctgattta
gatggtgtagctgacattgaggctgttgttaacttatcaccgccgacgccgccatcaaca
accgcgtcaaaagacattgtgataaaagccgatagcaatcaagagcacttaagaagcgat
aattgcagcagagaaatcgccatcgacgcgtccagtgcaccaatgccaacagatgccaat
accacgggtacacacagcaccaagataaccttcgatcacaaaaccaaagactcgcacagc
cagcagcaacagctaatgcatcatcatcacagcagcactagtggaggtggctcagtaaac
gcatcaggctttgtgcgtagcgctagtccgcctctgcgtagcagcggcccagctggtgcc
tatgccgctgataaagagaatcagcctcgtgatagtcgccgaagacgcgcttctttgcgc
tctcgatctcgctcccgttcccgttccaatgaacgttcgtttaggcgatcacggtcacga
gatcgtcgcatcaatgagcgcgagaagagccagcgtcagttccgtaataagtcgccgccg
ggtggtacgagtgaacaacgacacagacgaagcaacaacaataacagcaccaacagcacg
aacaactttgacaggcgacgaatcggcaacaataatagcagcaacaacaacagcagcatg
gatgagcgcactcaacggttcggcaagagtcgccactctccacgcagtcgttccatttca
cccgaatcgcgcaatgtacggcgtggtgtcaacatcaacagcaacaacgttaacaacagc
gcaaacagcatggaagcagcggcttgctccactgctgccgtggtagcccctgctgtgcct
atgccgttgcccgtttcgcatcctgttgctgcaatggggcgtcaacgctgtcgcgacttc
gatgagaagggatactgtgtgcgcggcgaaacctgcccctgggatcatggaattaatcct
gtggtatttgaaggtataaacaattcagcattgatgatgtccatgcgcgagtacaatccc
gatgcacctgagatttgggcacgtggcggccctgctggagttcccggcgtgcctcagcct
ggcggtggtccaccgcaggcactacccgtgccgccgcagggtggcccatcgaacattaat
ccattcagtggaaatgtgcgttcctgtgcgccgcacggtgtgcccaatcctgctgattat
gcgcgccagccagggcagccgccgcaagtacctgcaccgccgccgatgatgtcgttccct
tttaatccgacagccgtgacaacgccgttgcaacgccaactaatacccataccagtaatg
gatggaggcgttggaggcggggtaggcggcggcgggggtggtgggctggctgctgacatg
ggaaaacggcgtttcgagctggaggatagtgtggccatagccgatgtgcccagtaaaatg
cgcaagctgccaattaatagtcgcctaggacctcgcgtcaatcccaatatgcaacagcac
aatagttccctggagctgcggaaagtgccgcgtggactgaacaccatagcgcatctgaac
aatcatttcgccaagtttggcaaaattgttaatatccaagtgtcatacgaaggcgatccg
gaggcggcaatcgtcacattctcgacgcatgcggaggcaaatgttgcttatcgcagcacg
gaggcagtgctcaataatcgcttcatcaaggttttctggcacaacgacaacagcaatagc
agtagcattaataacaacaatagcaataacatcatcaatgattcgggcaacccgaatgtg
aatcgcaagagtcaatatcatttgcataacgtgcctgcaatgccgacgcctaatgcagac
agcgccaagataaccaacacgagcaacaacaacagtcaacccaaccagtccacacccctt
gtagacacaaataatgcattggcagctccaactacggagcagggactggcaatcaccgca
gcacccgcctccatgcgtctgaagctcaatgcgaacgcgacagcggctaatgcgtcagcg
actggtggagcaagagccctaacgccagcagtgaatgctgcgagcatacgaaaaaagcag
gaggagcaacaaaaggcaatgcaccagctagcgaatgggctgcgcaagcgtaagcaggag
ctcctccagagctatgtgaagcagatgaagacagcactagaactggttgagcgtatggat
cagcaagatgcgcagcgtgctccgacgctggaaacgatcaaagttctgcaggcaacgatt
gataagctgcgcaaagatgtgcatgctgatcaggatcagctccaggctcaaatccagcaa
cagcatcaacaacagcagcaaacgcttcccgtgaagaaaaccaaagagcaacagaaaaaa
gaactgcttgatatggagcttgagctaattgcccagcaacaggagggcaacgatacaacg
gctatacagaagcgtctcgaagagctgcagcgcacgctctctgcatcaactggaggtggc
tccttgtctggcggtggtggtgccaagctgcccggtggcggtgcacgtaaacgtgccaca
tatcccgaggggccgacccgtgtcgaccgacgaccaaaagcaattgtagtcactggcttc
gccgctgaggaagctgattttgtgctgggtcacttcaagcatttcggcgagatatctaag
cacgatgtggaccgtgagataccccaattaataatctcgtacgccacacgtctgaatgct
gagcaagcagtgctccgtggcaaaatatacaaagataagcgcctgcagatatcatgggcg
ccagtggtgtcaactcccgccgttgtacccatgggtgcaccggctgacaaatcaccggga
gcgttaatttcttcaacaactggtgataagctggataatccgaagcaattgttgcattca
tcggtcagcgagagcgaatctctgctgggcagcgatactctgccagagctgcggctcgaa
gatgaagaggaggatgaggagtctgaggatcgttcctggcgtcgttga

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