Drosophila navojoa: 108651896
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Entry
108651896 CDS
T05898
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
dnv
Drosophila navojoa
Pathway
dnv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108651896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnv03021
]
108651896
03041 Spliceosome [BR:
dnv03041
]
108651896
03036 Chromosome and associated proteins [BR:
dnv03036
]
108651896
Transcription machinery [BR:
dnv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108651896
Spliceosome [BR:
dnv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108651896
Complex B
108651896
Complex C
U2 SnRNP specific factors
108651896
Chromosome and associated proteins [BR:
dnv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108651896
TFTC complex
108651896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
108651896
NCBI-ProteinID:
XP_017957316
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG
CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPSKNALEKVHQETFGKSGCRRIVPGQY
FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP
MFACLEIDYEEADLDPTGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYF
FLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADLANEDT
PQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWKAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQ
RSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNAGADDDV
PAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEA
VLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLG
AVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNTRKEQMAEEMRSAAGEEE
RELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFTVPLTQNEAIMSM
AMLKFSVAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSALEFLHRTEIEEIPG
ALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF
FIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDP
TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFV
PFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIDAVKQ
KSIASDMFRTPNQICKKLEDIRTRYAF
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtacttgtataatttgacgctccaaaagggcaccggcgtcacacatgccgtgcacgga
aatttctcaggcggtaaacagcaggaggtgctgctgtcacgtggcaagtcgctggaactg
ctgcgacccgatcctaacacgggcaaagtccacacgctgatgtcgacggaaatatttggt
tgcatacgtgcgctaatggccttccgtctaacaggcggcacaaaagattatattgtcgtg
ggatcagattctggacgcattgttatactggagtatatgcctagcaagaatgccttggaa
aaagtacatcaggaaacctttggcaaatcgggctgccgccgcattgtgccgggacagtac
tttgccattgatcccaagggccgtgccgtgatgattggtgctgttgaaaaacaaaagctg
gcctacatcatgaatcgagatacccaggcacgactaactatatcttcacctctggaggca
cacaagtccaacacattgacttaccatatggtgggcgtggacgttggctttgataatccc
atgtttgcttgtctggaaatcgattacgaggaagctgacttggatccaacaggggatgca
gctcaacggacgcaacagacgctcacattttacgaacttgatttgggccttaaccatgtt
gttcgcaagtactctgaaccactcgaagaacatgcaaacttcttggtttctgtgccaggt
ggcaatgacggaccctctggcgtgcttatttgctctgagaactatttgacctacaagaat
ttgggtgatcagcatgatatacgttgtcccatacctcgtagacgcaatgatcttgatgat
cctgagcgtggaatgatcttcatatgctctgcaacccatcgcacgaagagcatgtacttc
tttctgctacaaacagagcagggcgatatattcaagataacccttgagaccgatgacgat
gtggtgtccgaaatcaagctaaagtactttgatacagtgccccccgcgacagcgatgtgt
gtgctgaagactggttttctgtttgtagccagtgaatttggcaaccattacttgtaccaa
atagcacatttgggtgatgacgatgatgaacccgaattcagttctgctatgccactggaa
gaaggtgaaacattcttcttcgctccacgtgcattaaagaatctcgttctggtcgatgag
ttgccttcctttgcgcctattatcacctcccaagtggctgatttggccaatgaggatacg
ccacaattgtatgtgctgtgtgggcgtggaccgcgctccacacttcgtgtactgcgccat
ggtcttgaagtatcagagatggctgtctccgagttgcccggtaatccgaatgccgtgtgg
actgtcaagaaacgcattgacgacgagtttgatgcctatatcattgtctcattcgtgaat
gctacactggttctgagcattggcgagaccgtcgaggaagtgacggacagcggttttcta
ggcactacgccaacgttgtgctgtgctgcactgggcgacgatgctttggtccaagtctat
ccagatggcattcgtcatatacggtctgataagcgcgtaaacgaatggaaggcgcccggc
aagaaatccatcacaaaatgcgctgtcaatcaacgtcaggtggtcattacgctctctggt
cgcgagttggtttacttcgaaatggatccgactggtgaactgaacgagtacacggaacgg
tcggaaatgcctgcagagatcatgtgcatggctctgggcacggtgccagagggcgagcaa
cgatcttggttcttagcagttggtctggctgataacactgtgcgcatactttctctggat
cccaataattgcctctctccgtgctccatgcaggcgctaccctcgccggccgagtcgttg
tgtttggtcgaaatgggtcatacggagagtacgaccaatgccggtgcagatgatgatgtg
ccggcacaacgcagcggcagcaataagggcaccatctatctgaatattggattaagtaac
ggtgtcttactgcgcactgtgttggatcctgtatctggcgatttggcggatacccgaaca
cgttatttgggttcacgtccggtgaaactgttccgcatcaagatgcaaggttctgaagcc
gtgttggccatgtctagccgcacctggttgtcctactatcatcagaatcgtttccatttg
acaccgctgtcgtatgagacgttagaatatgcttcgggcttctctagcgaacagtgtagt
gagggcattgtggctatatcgactaatactctgcgtatcctcgcgttggagaaactgggc
gcggttttcaatcaggtggcttttccactgcaattcacgccgcgggcctttgtcatacat
ccggatacgggtcgcatgttgattgctgaaacggatcataatgcgtacaccgaggaaaca
aagaacacgcgtaaggagcaaatggctgaggaaatgcgtagcgctgctggcgaagaggag
cgcgaactggccagggaaatggccaacgctttcatcaatgaagtgctgcccgaggatgtg
ttctctgcacccaaggcaggactcggcttatgggcttcgcaaatacgctgcctagatgcc
atgcacggccaaacgatgttcactgtgcccctaacacagaacgaggctatcatgtcgatg
gccatgcttaagttctccgttgctgctgatggtcgctattatttggctgtgggaattgcc
aaggatctacagctgaatccgcgtatctcgcaaggtggatgcattgatatttacaaaatt
gatccaacttgctcggcactagaatttctacatcgtactgagatcgaggagatacccggc
gcattgtgtggtttccagggtcgcctactagctggctgtggtcgcatgctgcgcatctat
gatttgggcaagaagaagatgctgcgcaagtgcgaaaataaacacattccctaccagatt
gtcaacattcaagcgatgggccaccgtgtctatgtctctgatgtccaggagtctgtattc
ttcatacgctatcgtcgcgccgagaatcagctcatcatattcgctgatgatacccatccg
cgttgggtaacggccacaactctcttggattatgataccattgctattgctgataagttt
ggcaacctgagcattcaacgcctgccgcactcagtcaccgatgatgtggacgaagatcct
acaggcacgaagtcgctctgggatcgtggattgctgtcgggtgcctcgcagaagtctgag
aacatttgctcgttccatgtgggagagattatcatgtcgctacagaaggccactctcatt
cccggaggctccgaagcactcatctatgccacattgagcggtaccgtgggcgctttcgtg
ccgttcactagtcgtgaggactacgacttcttccagcacttggagatgcacatgcgcaat
gaaaacccgcccttatgtggtcgggatcatctcagctaccgcagctcatactatcctgtg
aagaacgtactggacggtgatctctgcgaacagtatttatctattgatgcagtaaagcag
aagagcattgcaagtgacatgttccgcacgcccaatcaaatctgcaagaagctcgaagac
atacgcacacgctatgcgttctaa
DBGET
integrated database retrieval system
