Drosophila navojoa: 108652110
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Entry
108652110 CDS
T05898
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dnv
Drosophila navojoa
Pathway
dnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108652110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108652110
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108652110
mRNA degradation factors
3'-5' decay
Pan complex
108652110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
DUF4797
Pkinase
Senescence_reg
Motif
Other DBs
NCBI-GeneID:
108652110
NCBI-ProteinID:
XP_017957680
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MDPIFFSPSNGIPSESKLATYMNRQNIAQTSGYGLNNGNVNVNGNGNGFSLLNLDASLAV
NKKSQVTPQSPEFIPTRISSSPNFYPPYHMNNGLNGVNGLTTTTAAAAAAAAAAAAAAVA
TAAAPASASTTSSSSPSTVAAAVTVSGSSGKLANGGNSTSMLSMQKTNIVATVNITQQQQ
QQQQQQQQKQQQQQQPALVNDSIVGSSAPIAIIPNPAAAPFVSSMSAQTPLKARAAMMRQ
DSPTAALIGGEKSPPHGMTPHGASPIPTTLPASVHQENVGGTIYFYPTANAQNSQPVVNS
VVVDAAHPAHPAHHGVVSAVAPLSAVPSQLLYAGHVYPGPASNVITMQPKTQLESAFFMP
DEMRSDILGRNEISNLIMDAAEAAQHALPLEVDNYHALYPLEPPAPPMHTKLTLPASTYR
ATHNSTGLKYCLRRLHGFRLQSTKCMTLVEMWKKLQHTNVVQLREVFTTKAFGDNSLVLV
YDYYPGSQTLLAKYFTPAPETNGYTDPFQGEARPFSHKSNMQRTNNGPLLPESTIWSIIM
QLTAGLRAIHQAGLACKILDPTKIIVTGKRVRFSSCCISDITQFDPNAANPLALVNMHQQ
EDLTALGRLVLALACRCLQSVQRDNVQASIDMVTRNYSTDLRNFIVYLFTTNNRRSVTDL
MPMIGARFYTQLDALQAQVDMQEDELAKEMENGRLYRILVKLNSINERPDFNLDCTWSET
GDRYMLKLFRDFLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMSRDEQSVLIVSY
AELKNCLENAFSELMSAAN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatccaattttcttttcgccttcaaatggtataccctctgaaagtaaattagccaca
tatatgaatcgacagaatattgcccaaacgtcgggctatgggctgaataacggtaatgtt
aacgttaacggtaacggtaatgggttctcactacttaacttggacgcgtccctagctgtt
aataaaaagtctcaggtaacaccacaatcgcccgaattcattccaacgcgcataagttcg
tcgcccaatttctatccgccgtatcacatgaataatggtctgaatggtgtcaatgggtta
acaacaacgaccgcagcagcagcagccgccgccgccgccgccgctgccgccgcagttgca
actgcagcagcgcccgcctccgcctctaccacatcgtcctcgtcgccatcgacggtggca
gccgcagtcaccgtctctggctcgtcaggcaagctggcgaatggtggcaactccacttcc
atgctctcgatgcagaagacgaatattgtggcaactgttaatattacgcaacagcaacag
cagcagcagcagcagcagcaacaaaagcaacaacaacaacagcagccggcactggttaac
gattcaatcgtcggcagctcggcgcctatagcgattataccgaatcctgcggcggctccc
tttgtgagcagcatgtccgcccaaacgccgctcaaggccagagccgcaatgatgcgacag
gattcgcccacagcggcgctgatcggcggcgagaagtcaccgccacacggcatgacgcca
cacggagcatcgcccatacccaccacattgccagccagcgtgcatcaggaaaacgtgggg
ggcaccatctacttttatccaactgccaatgcacagaacagccagccggttgtcaactcg
gttgtggtagatgccgcacatcccgcacatccggcacatcatggcgttgtcagtgctgtg
gcaccattgagtgcagtgccctcgcagctgctgtatgcgggacatgtgtatccgggtccg
gcatcgaatgtgattacgatgcagccaaagacgcagctggagtcggccttcttcatgccg
gacgagatgcgcagcgatattctgggccgcaacgagatctccaatttgattatggatgcg
gccgaggcggcgcagcatgcgttgccgctcgaggtggataactatcatgcgctctatcca
ctggagccgccggcaccgcccatgcatacgaagctaacgctgccggcgagcacgtacagg
gcgacgcacaatagcacagggctgaagtactgcctgagaagattacacggctttcgcttg
cagtcgacgaaatgcatgacgctcgtggagatgtggaagaagctgcagcacacgaatgtg
gttcagctgcgtgaggtgttcacgacaaaagcatttggtgataactccttagtattagtg
tacgactattatcccggctcacagactttgctagccaaatactttacgccagcgccagag
accaacggctacacagatccattccaaggcgaggcacgccccttcagtcataagagcaac
atgcagcgcacaaataacggacctctgctgcccgaatcgactatttggtccatcatcatg
cagctcaccgcaggcctgagagccatacatcaagcgggactggcctgcaaaatactagat
cccacaaagataattgtgacagggaaacgcgtgcgcttcagctcgtgctgcatctcagat
atcacgcaattcgatccaaatgcagccaaccccttagcattggtcaacatgcatcagcag
gaggatctaactgcattgggtcgcttagtattagcgttagcctgccgctgtttgcagtct
gtgcagcgggacaatgtgcaggcgagcattgatatggtaaccagaaactactccaccgat
ctacgtaattttattgtttacctcttcaccacgaataaccgccgttccgtaacggatctg
atgcccatgattggagcacgtttttatacgcagctggatgcgctgcaagcacaggtggat
atgcaggaggatgagttggccaaggagatggagaacgggcgactatatcgcattttagtt
aaactaaatagcatcaacgaacgacccgacttcaacctggactgcacttggtcagagact
ggtgatagatatatgctgaaattattccgtgattttctatttcattccgtcaccgaggat
ggccgaccctggttggatcatgcgcacattgtacaatgcctcaataaactggacgcgggc
tccattgagcgcgtgcaattaatgtcacgcgatgagcaatcggttttaattgtctcctat
gctgaactcaagaattgtctggagaacgccttctccgaactgatgagtgcggccaactga
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