Drosophila navojoa: 108652565
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Entry
108652565 CDS
T05898
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dnv
Drosophila navojoa
Pathway
dnv03022
Basal transcription factors
dnv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108652565
09124 Replication and repair
03420 Nucleotide excision repair
108652565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnv03021
]
108652565
03400 DNA repair and recombination proteins [BR:
dnv03400
]
108652565
Transcription machinery [BR:
dnv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108652565
DNA repair and recombination proteins [BR:
dnv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108652565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
108652565
NCBI-ProteinID:
XP_030243410
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MADTKSGRHASTSAATPLLVQSPENLECKNFQEYLRTRQTPETLEKLYTYPPICLAVYRE
LPEVARQFVIRMLFVDQPVPQAVVSSWGAQRVAKEQLDSTNCLSALSVWRVTAIPGGLPA
WELTPTFKKSVRQVLLGGGKPWAITNSLERDAKPRDVAFLDSYAMSRWRCVLHYMVGTGN
RNNIEAEAISPDAVRILLHANLMKRDEREGITITRQGFQFLLLDTRAQVWHFMLQYLDTC
HERGLVLADCLSMLFQLSFSTLGRDYSSEGMNKQMLMFLQHLREFGLVFQRKRKEHRFYP
TRLALNVTNKEAAEASISADEERMQERGYIVVETNYRVYAYTDSQLQVAVLGLFTELLYR
FPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMKLVESAIQSKSCLPPTVVDQI
KLWEMERNRFTYTEGVVYNQFLSQNDFVTLRDYAQSLNVLVWQNERTRTMVVQKNGHDDV
KRYWKKYSKSAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacaaaatccggccgtcatgcaagcaccagcgctgcaactccactgctcgtg
cagagccccgagaacctggaatgcaagaactttcaggaatatctgcgcacccgccagaca
cctgaaacattggagaaactctacacttatccacccatttgcctagctgtctaccgcgag
ctgcccgaagtcgcaagacaatttgtcattcgtatgctgttcgtagaccaacccgtacca
caggctgttgtcagctcatggggcgcccaacgtgtggccaaggagcaactggattcaact
aactgcttgtctgccttatctgtatggcgtgtgacagccatacccggtggactacctgcc
tgggaactaacacccacatttaagaagagcgtgcgccaagtgttgttaggtggaggaaag
ccctgggcaatcaccaattcactcgaaagggacgccaagccacgggatgttgcattcctt
gactcgtatgccatgtctcggtggcgttgtgtgctgcattacatggtgggtacgggcaat
cgaaataacatcgaagctgaggccatcagtccagatgccgtacgtattctactccatgct
aatcttatgaagcgcgatgagcgggaaggcattaccattacacgtcaaggatttcagttc
ctgctgctggacacacgagcccaggtctggcattttatgctgcagtatctagatacgtgc
catgaacgtggcctggtcttggccgattgcctgtctatgctctttcaattgagcttctct
acgctgggtcgcgactacagctctgagggcatgaacaagcagatgctgatgtttctccag
cacctgcgggagttcggcctggtatttcaaaggaaacgcaaggagcatcgcttttatccc
acgcgactagcgttaaatgtaacaaacaaggaagcggcagaagcctcaatttcggcggat
gaagagcgcatgcaggagcgaggctacattgtggtggagaccaactatcgcgtatatgcc
tacacagactctcagttgcaggttgctgtgctgggccttttcaccgaacttctctatcgg
tttcccaatctcgtggtgggcgtgctcacccgagactctgtgcgtcaagcgctgcgaggt
ggcattacggccgagcaaatagtcagctatttggagcagtatgcacatcccaacatgaaa
ttggttgagtctgcaattcaatcaaaatcctgcctgccacccacggtcgtggaccaaatc
aaactgtgggaaatggaacgcaatcgtttcacctacaccgagggcgttgtctacaatcag
ttcctctctcagaatgacttcgtaacgctgcgcgactacgcccaatccctgaatgtgctg
gtctggcaaaacgagcggacccggaccatggtcgtgcaaaagaatggacacgacgatgtc
aagcgctattggaaaaagtactcaaagagcgccggctaa
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integrated database retrieval system
