KEGG   Drosophila navojoa: 108652920
Entry
108652920         CDS       T05898                                 
Name
(RefSeq) endoribonuclease Dicer
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
dnv  Drosophila navojoa
Brite
KEGG Orthology (KO) [BR:dnv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dnv03036]
    108652920
Chromosome and associated proteins [BR:dnv03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    108652920
   microRNA pathway
    RISC loading complex
     108652920
SSDB
Motif
Pfam: Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 PAZ Dicer_platform Helicase_C Dicer_dsRBD dsrm DSRM_2
Other DBs
NCBI-GeneID: 108652920
NCBI-ProteinID: XP_030245302
LinkDB
Position
Unknown
AA seq 1614 aa
VLVGTAQVILNLISENYMSLTSVSIAILDECHHGTGKHPYHEFMKLVQMQMKKGIKNLPR
IVGLTGVLIKGNEIKEVAKKLKELETTYCGNIVTVSDTKELENVMLHSTKPRESLMTYKS
EVQIFDKIKKIRQRIKNYLQTLELQDIGVQPVRMSKGMRIQREPNKKSAIKLLINDFLYQ
LDNYGIYAGSIAIVSLIVEFEIKRRQAETLSLRNMYRSAITLCETVRHMLVSKLRDMLDD
DQMSDDMINTEEVIMNFSTPKVQLFLQYLKQTFGNKQPKDICCLVFVERRYTCKCIYGLL
LNYIAATPELRNVLFPQFMVGRSGIFHDFDKLERRWLKSAIQEFRDGEANMMICSSVLEE
GIDVQACNYVIILDPIKTFNMYVQTKGRARSKEASFIIISSDLEKQKTSTQILQYRKAHA
DIGEYLKDRVLERADPQLDDINEHFQDDIPPFISGSGAVLLASSALALVHRYCQQMPSDA
FGIVLPWFKLLEPEERRAFTKDWAQKYVVSLTLPLNSALRETIYSDAMPCSRLAKISAAF
KTCVKLYQLGELNERFLPTTAIERVAEIANIHFEHWKKYGDNVTFKHSDREHINKNMKTY
VTKYPEEFNDAMPRVGVTCYAYEISVEPHYDRNDYTSHIYDSLQTRRNYALLLTKRLPRM
AEMPLFSHQGKMHAHVAEEPREVVIRTEEQLEQVQHFHVMIFRDILRIWQPFFVFDRHSN
ENSFLVVPLSATPDVGIDWPLVQQFQRLPKAHSRSLAERQQLPPPNPEDYVGTIVTQWYA
NYDEKRMLVTKVHTDLTPLSMMEEKHQDKNYYEFTMSKYRNYIGDVVYKQQFLIEVRELS
DQLNFYVQQRVKSSALSKARAKVMLIPELCFNFGFPGDLWVKLLFLPSILRRLHFMLHAE
TLRVRINKYLGLDKMPQNGVDYRPRPLEIDWSLRRNVDHQGNAMYADDYEEPRPLLEPLP
TKGVEMAMEKLEITDLEVPWQQYMEPRDIERNVMSTYPVELSYFYNFTKGKNDSLDSMEY
EDKELWTQLQFKMPKGNIYSSQTRSNKLPAIMPSSTDNGKPVEQVELSVLQHSISNDHIT
PAEQGEFLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANRYPDWNEGILTQVKSTL
VSNRNLLYCLSETDIPLRIYSTLFTPKYSWLPPSVSLPQNVKALWKEDPGVAALVGPHNL
RNLSISEEELFGDGNCGKQSFIHFVNGCQANQQSHHAGLDYSSEINFCLGQVQMPDKLIA
DTLEAILGVVVKNYGLHHGFRMLEYFGICKPDIGKPLTQLLDLRLGGSRMRTNISQREVD
GFLINHRHLEQNLGYTFCDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYI
FEHKTRMTPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLSESIQSFVQFQETQN
HRVTNHVRILMEEKDVQPEPLDSDEELEMAELTAKQAKPTISEAKAPKVGEFNISHNVDV
PKALGDVLEALIAAVYLDCRDLNTTWQVVYRLFEPELLEFSRNVPLNPIRQLFEHKLAKP
TFSSPVMDNNQVMVTCQFICMEKTIKVYGFGNNGKQAKLSAAKHALQKLAKCEA
NT seq 4845 nt   +upstreamnt  +downstreamnt
gtattggtaggcacagctcaggtcattctcaatttaataagtgaaaattacatgtcactg
acttcggtgagcattgctattttagacgaatgccatcatggcactggcaaacacccatat
cacgagtttatgaagcttgttcaaatgcaaatgaaaaaaggtataaaaaacctgccccga
atcgtaggtctgaccggcgtcctgattaaaggcaacgagattaaggaggtagccaaaaag
ttaaaagagctggaaaccacatattgtggcaatattgtcaccgtctctgacaccaaggaa
ttggagaacgtaatgcttcactccaccaaaccgcgcgaatcgctaatgacctataaatcg
gaggttcaaatatttgacaaaattaaaaaaatcaggcaacgcatcaagaactacttacag
acgctggaactccaagacattggggttcagcccgtgcgtatgtccaaggggatgcgaata
cagcgcgaaccgaacaaaaagagcgccataaaactgctaattaatgactttctataccaa
ttggataactacggcatctatgcgggatccattgcaatcgtatccttgatagtcgagttt
gagataaaacggcgacaggccgagacgctcagtttgcgtaatatgtatcgctcagccatc
acgctctgcgagactgtgcgccacatgttggtttcgaaactacgcgacatgttggacgac
gatcagatgtccgacgacatgatcaatacagaagaagtgatcatgaacttctccacgcct
aaagtgcaattgtttttgcagtatctgaagcaaacctttggcaacaagcaacccaaagat
atttgctgtctggtctttgtagagcgtcgctatacgtgcaagtgtatctatggactactg
cttaactatattgcagccacgcccgagctacgaaacgtgctttttcctcaatttatggtt
ggacgcagtggtatttttcatgatttcgacaaactcgaacgtcgctggctaaaatcggca
attcaagagtttcgggatggcgaggcaaatatgatgatatgctccagcgttttggaggaa
ggcatagatgtacaggcctgtaactatgtaattatactggatccgataaagaccttcaat
atgtatgtgcaaaccaagggacgtgcgcgctcaaaggaagcatcattcataatcatctcg
tcggatctggaaaagcaaaagacctcgactcaaatactgcagtatcgaaaggcacacgcc
gacatcggtgaatatctgaaagatcgcgtgctagagcgtgcagatccccaactggacgat
atcaacgagcacttccaggatgatattccgccgttcatcagcggaagtggtgccgtgttg
ctggccagcagtgccctagccctagtgcatcgctattgccaacagatgccatcggatgcc
tttggcattgtcctgccctggttcaagctactcgagccagaggaacgtagggcattcacc
aaagattgggcgcaaaaatatgttgtgtccctaaccttgccacttaactcagcgttacgc
gaaacaatctatagtgacgccatgccttgctcacgcttggctaaaatttcggcggcattc
aagacctgtgtcaaactctaccagttgggtgaacttaatgagcgctttttgcctacaacg
gcaatcgaacgcgttgccgagatcgccaatattcactttgagcattggaagaagtacggc
gacaatgttacctttaagcattcagatcgcgaacatatcaacaagaacatgaaaacttat
gtcacaaaatatccagaagaatttaacgatgctatgccgcgagtgggagttacatgctat
gcatatgagattagtgtcgagccacactacgatcgcaatgattacacgagtcatatttac
gactcgctgcaaacgcgtcggaactacgctctgctgctgacgaagcggttgccacgcatg
gccgagatgccactcttcagccaccagggcaagatgcatgcgcatgtggccgaagagccg
cgggaggtagtcatacggacagaagagcagttggaacaggtgcagcattttcatgtaatg
atcttccgagatatcctgcgtatttggcagccatttttcgtgtttgatcgccatagtaat
gaaaactctttcctcgtggtgccactgtcagcaacgcctgacgttggcatcgattggcca
ctggtacaacaattccaacgcttgcccaaggctcactctagaagtctggccgagcgccaa
caattaccgccacctaatccagaggactatgtgggcacgatagtaacgcagtggtatgcc
aattacgatgagaaacgtatgttggttaccaaagtccacacggatctgacgcccctaagc
atgatggaggaaaaacatcaggacaagaactactacgagttcaccatgtcaaagtaccgc
aactacataggcgatgtagtgtacaagcagcagttcctaatcgaggtacgggaactatcc
gatcagttgaatttttatgtgcagcaacgcgttaaatcctcggcactgagtaaagcgcgt
gccaaggttatgctaattcctgagctgtgctttaatttcggatttcctggcgacctgtgg
gtgaagctgcttttcctacctagtatattgcgacgtctgcactttatgctgcatgctgag
acgctgcgtgttcgaattaataaatatcttggtctggataaaatgccccagaacggagtg
gattatagaccgcggcccttggagattgactggtcgctccgtcgaaacgtcgatcaccag
ggcaatgcgatgtatgctgatgattacgaagagccgcgtccactgctcgagcctctgcca
accaagggagtcgagatggcgatggaaaagctggagataaccgacctggaagtaccttgg
cagcagtatatggaacctcgcgacattgaacgcaacgtcatgtccacctatcctgtagaa
ctttcatatttttacaatttcaccaaaggaaagaatgatagtctcgatagtatggagtac
gaggacaaagagctctggacccagttgcaattcaaaatgcccaagggcaatatatatagc
agtcagacgcgttcaaataagctgcctgccataatgccctctagcacggataatggaaaa
cctgtcgagcaggtggagttatctgtgttgcagcacagtatttctaatgaccatataact
ccagcagaacagggcgagttcctggcagccatcacatatgcgggtagtgtcgacgtcttc
gatatggagcgcttcgagcttctcggcgattgttttcttaaactcagcgccaccctatat
ttggctaacaggtatccggactggaatgaaggcatcctgacacaggtaaaatcgacgctg
gtttctaatcgtaatctattatactgtctcagcgaaacagacataccccttcgcatctac
agcacgctcttcacaccgaagtactcatggctgccgcccagtgtgtccttgccacagaat
gtgaaggctctttggaaggaggatccgggtgtggcagcgctggtcggtccgcacaatttg
cgcaacttatccatcagcgaggaagagctgttcggcgatggcaattgtggaaagcaatcg
tttattcattttgtcaatggctgtcaagccaaccagcaatctcaccatgcgggcttagac
tatagcagcgaaattaacttctgcctgggccaggtgcagatgcctgataaactgatcgcc
gacaccctggaggcgatattgggcgtggttgtgaagaactatggactgcatcacggcttc
cgcatgctggaatattttggcatctgcaaaccagacattggcaagccactcacacagctg
ctagatctgcggctaggtgggtcacggatgcgcaccaatatttcgcagcgtgaggtggat
ggtttcttgatcaatcatcggcatttagagcaaaatttgggttacactttctgcgatcgg
gcttatctcctgcaagccttaacacatccttcgaatcccacaaaccgtttgacgggttgt
taccaggagttggaatttataggcgatgctatattggatttcctaatctcagcttacata
tttgagcacaaaactcgtatgacacctggtcagttgacagatctgcgctcggctctggtt
aacaatacgactctggcttgcatttgtgtgcgccatcgattccatttcttcattctagca
gagaatgcactactctctgaatcgattcagagtttcgtgcagttccaggagacgcagaat
catcgcgttactaaccatgtgcgcattctcatggaggagaaagatgtgcagccggagcct
cttgactcagatgaagaattagaaatggccgagctgacggcgaagcaagccaaacctaca
atcagcgaagccaaagccccgaaagtaggcgagtttaacatttctcataacgtcgatgtg
cccaaggccttgggtgatgttctggaggcacttatagccgccgtttacctagactgccgc
gacttaaacaccacctggcaagtggtctacagactgtttgagcccgaactactggaattc
tcgcgtaatgtgccactcaatccgatccgtcagctctttgagcacaagctggcaaagccc
acctttagctcgcctgtcatggacaataaccaagtgatggtcacctgtcaattcatctgc
atggagaagaccatcaaggtctatggctttggtaataacggaaagcaggccaagttgtca
gctgcaaaacatgctctccaaaaactggccaagtgcgaagcatag

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