Drosophila navojoa: 108652920
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Entry
108652920 CDS
T05898
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dnv
Drosophila navojoa
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dnv03036
]
108652920
Chromosome and associated proteins [BR:
dnv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108652920
microRNA pathway
RISC loading complex
108652920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
PAZ
Dicer_platform
Helicase_C
Dicer_dsRBD
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
108652920
NCBI-ProteinID:
XP_030245302
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
VLVGTAQVILNLISENYMSLTSVSIAILDECHHGTGKHPYHEFMKLVQMQMKKGIKNLPR
IVGLTGVLIKGNEIKEVAKKLKELETTYCGNIVTVSDTKELENVMLHSTKPRESLMTYKS
EVQIFDKIKKIRQRIKNYLQTLELQDIGVQPVRMSKGMRIQREPNKKSAIKLLINDFLYQ
LDNYGIYAGSIAIVSLIVEFEIKRRQAETLSLRNMYRSAITLCETVRHMLVSKLRDMLDD
DQMSDDMINTEEVIMNFSTPKVQLFLQYLKQTFGNKQPKDICCLVFVERRYTCKCIYGLL
LNYIAATPELRNVLFPQFMVGRSGIFHDFDKLERRWLKSAIQEFRDGEANMMICSSVLEE
GIDVQACNYVIILDPIKTFNMYVQTKGRARSKEASFIIISSDLEKQKTSTQILQYRKAHA
DIGEYLKDRVLERADPQLDDINEHFQDDIPPFISGSGAVLLASSALALVHRYCQQMPSDA
FGIVLPWFKLLEPEERRAFTKDWAQKYVVSLTLPLNSALRETIYSDAMPCSRLAKISAAF
KTCVKLYQLGELNERFLPTTAIERVAEIANIHFEHWKKYGDNVTFKHSDREHINKNMKTY
VTKYPEEFNDAMPRVGVTCYAYEISVEPHYDRNDYTSHIYDSLQTRRNYALLLTKRLPRM
AEMPLFSHQGKMHAHVAEEPREVVIRTEEQLEQVQHFHVMIFRDILRIWQPFFVFDRHSN
ENSFLVVPLSATPDVGIDWPLVQQFQRLPKAHSRSLAERQQLPPPNPEDYVGTIVTQWYA
NYDEKRMLVTKVHTDLTPLSMMEEKHQDKNYYEFTMSKYRNYIGDVVYKQQFLIEVRELS
DQLNFYVQQRVKSSALSKARAKVMLIPELCFNFGFPGDLWVKLLFLPSILRRLHFMLHAE
TLRVRINKYLGLDKMPQNGVDYRPRPLEIDWSLRRNVDHQGNAMYADDYEEPRPLLEPLP
TKGVEMAMEKLEITDLEVPWQQYMEPRDIERNVMSTYPVELSYFYNFTKGKNDSLDSMEY
EDKELWTQLQFKMPKGNIYSSQTRSNKLPAIMPSSTDNGKPVEQVELSVLQHSISNDHIT
PAEQGEFLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANRYPDWNEGILTQVKSTL
VSNRNLLYCLSETDIPLRIYSTLFTPKYSWLPPSVSLPQNVKALWKEDPGVAALVGPHNL
RNLSISEEELFGDGNCGKQSFIHFVNGCQANQQSHHAGLDYSSEINFCLGQVQMPDKLIA
DTLEAILGVVVKNYGLHHGFRMLEYFGICKPDIGKPLTQLLDLRLGGSRMRTNISQREVD
GFLINHRHLEQNLGYTFCDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYI
FEHKTRMTPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLSESIQSFVQFQETQN
HRVTNHVRILMEEKDVQPEPLDSDEELEMAELTAKQAKPTISEAKAPKVGEFNISHNVDV
PKALGDVLEALIAAVYLDCRDLNTTWQVVYRLFEPELLEFSRNVPLNPIRQLFEHKLAKP
TFSSPVMDNNQVMVTCQFICMEKTIKVYGFGNNGKQAKLSAAKHALQKLAKCEA
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
gtattggtaggcacagctcaggtcattctcaatttaataagtgaaaattacatgtcactg
acttcggtgagcattgctattttagacgaatgccatcatggcactggcaaacacccatat
cacgagtttatgaagcttgttcaaatgcaaatgaaaaaaggtataaaaaacctgccccga
atcgtaggtctgaccggcgtcctgattaaaggcaacgagattaaggaggtagccaaaaag
ttaaaagagctggaaaccacatattgtggcaatattgtcaccgtctctgacaccaaggaa
ttggagaacgtaatgcttcactccaccaaaccgcgcgaatcgctaatgacctataaatcg
gaggttcaaatatttgacaaaattaaaaaaatcaggcaacgcatcaagaactacttacag
acgctggaactccaagacattggggttcagcccgtgcgtatgtccaaggggatgcgaata
cagcgcgaaccgaacaaaaagagcgccataaaactgctaattaatgactttctataccaa
ttggataactacggcatctatgcgggatccattgcaatcgtatccttgatagtcgagttt
gagataaaacggcgacaggccgagacgctcagtttgcgtaatatgtatcgctcagccatc
acgctctgcgagactgtgcgccacatgttggtttcgaaactacgcgacatgttggacgac
gatcagatgtccgacgacatgatcaatacagaagaagtgatcatgaacttctccacgcct
aaagtgcaattgtttttgcagtatctgaagcaaacctttggcaacaagcaacccaaagat
atttgctgtctggtctttgtagagcgtcgctatacgtgcaagtgtatctatggactactg
cttaactatattgcagccacgcccgagctacgaaacgtgctttttcctcaatttatggtt
ggacgcagtggtatttttcatgatttcgacaaactcgaacgtcgctggctaaaatcggca
attcaagagtttcgggatggcgaggcaaatatgatgatatgctccagcgttttggaggaa
ggcatagatgtacaggcctgtaactatgtaattatactggatccgataaagaccttcaat
atgtatgtgcaaaccaagggacgtgcgcgctcaaaggaagcatcattcataatcatctcg
tcggatctggaaaagcaaaagacctcgactcaaatactgcagtatcgaaaggcacacgcc
gacatcggtgaatatctgaaagatcgcgtgctagagcgtgcagatccccaactggacgat
atcaacgagcacttccaggatgatattccgccgttcatcagcggaagtggtgccgtgttg
ctggccagcagtgccctagccctagtgcatcgctattgccaacagatgccatcggatgcc
tttggcattgtcctgccctggttcaagctactcgagccagaggaacgtagggcattcacc
aaagattgggcgcaaaaatatgttgtgtccctaaccttgccacttaactcagcgttacgc
gaaacaatctatagtgacgccatgccttgctcacgcttggctaaaatttcggcggcattc
aagacctgtgtcaaactctaccagttgggtgaacttaatgagcgctttttgcctacaacg
gcaatcgaacgcgttgccgagatcgccaatattcactttgagcattggaagaagtacggc
gacaatgttacctttaagcattcagatcgcgaacatatcaacaagaacatgaaaacttat
gtcacaaaatatccagaagaatttaacgatgctatgccgcgagtgggagttacatgctat
gcatatgagattagtgtcgagccacactacgatcgcaatgattacacgagtcatatttac
gactcgctgcaaacgcgtcggaactacgctctgctgctgacgaagcggttgccacgcatg
gccgagatgccactcttcagccaccagggcaagatgcatgcgcatgtggccgaagagccg
cgggaggtagtcatacggacagaagagcagttggaacaggtgcagcattttcatgtaatg
atcttccgagatatcctgcgtatttggcagccatttttcgtgtttgatcgccatagtaat
gaaaactctttcctcgtggtgccactgtcagcaacgcctgacgttggcatcgattggcca
ctggtacaacaattccaacgcttgcccaaggctcactctagaagtctggccgagcgccaa
caattaccgccacctaatccagaggactatgtgggcacgatagtaacgcagtggtatgcc
aattacgatgagaaacgtatgttggttaccaaagtccacacggatctgacgcccctaagc
atgatggaggaaaaacatcaggacaagaactactacgagttcaccatgtcaaagtaccgc
aactacataggcgatgtagtgtacaagcagcagttcctaatcgaggtacgggaactatcc
gatcagttgaatttttatgtgcagcaacgcgttaaatcctcggcactgagtaaagcgcgt
gccaaggttatgctaattcctgagctgtgctttaatttcggatttcctggcgacctgtgg
gtgaagctgcttttcctacctagtatattgcgacgtctgcactttatgctgcatgctgag
acgctgcgtgttcgaattaataaatatcttggtctggataaaatgccccagaacggagtg
gattatagaccgcggcccttggagattgactggtcgctccgtcgaaacgtcgatcaccag
ggcaatgcgatgtatgctgatgattacgaagagccgcgtccactgctcgagcctctgcca
accaagggagtcgagatggcgatggaaaagctggagataaccgacctggaagtaccttgg
cagcagtatatggaacctcgcgacattgaacgcaacgtcatgtccacctatcctgtagaa
ctttcatatttttacaatttcaccaaaggaaagaatgatagtctcgatagtatggagtac
gaggacaaagagctctggacccagttgcaattcaaaatgcccaagggcaatatatatagc
agtcagacgcgttcaaataagctgcctgccataatgccctctagcacggataatggaaaa
cctgtcgagcaggtggagttatctgtgttgcagcacagtatttctaatgaccatataact
ccagcagaacagggcgagttcctggcagccatcacatatgcgggtagtgtcgacgtcttc
gatatggagcgcttcgagcttctcggcgattgttttcttaaactcagcgccaccctatat
ttggctaacaggtatccggactggaatgaaggcatcctgacacaggtaaaatcgacgctg
gtttctaatcgtaatctattatactgtctcagcgaaacagacataccccttcgcatctac
agcacgctcttcacaccgaagtactcatggctgccgcccagtgtgtccttgccacagaat
gtgaaggctctttggaaggaggatccgggtgtggcagcgctggtcggtccgcacaatttg
cgcaacttatccatcagcgaggaagagctgttcggcgatggcaattgtggaaagcaatcg
tttattcattttgtcaatggctgtcaagccaaccagcaatctcaccatgcgggcttagac
tatagcagcgaaattaacttctgcctgggccaggtgcagatgcctgataaactgatcgcc
gacaccctggaggcgatattgggcgtggttgtgaagaactatggactgcatcacggcttc
cgcatgctggaatattttggcatctgcaaaccagacattggcaagccactcacacagctg
ctagatctgcggctaggtgggtcacggatgcgcaccaatatttcgcagcgtgaggtggat
ggtttcttgatcaatcatcggcatttagagcaaaatttgggttacactttctgcgatcgg
gcttatctcctgcaagccttaacacatccttcgaatcccacaaaccgtttgacgggttgt
taccaggagttggaatttataggcgatgctatattggatttcctaatctcagcttacata
tttgagcacaaaactcgtatgacacctggtcagttgacagatctgcgctcggctctggtt
aacaatacgactctggcttgcatttgtgtgcgccatcgattccatttcttcattctagca
gagaatgcactactctctgaatcgattcagagtttcgtgcagttccaggagacgcagaat
catcgcgttactaaccatgtgcgcattctcatggaggagaaagatgtgcagccggagcct
cttgactcagatgaagaattagaaatggccgagctgacggcgaagcaagccaaacctaca
atcagcgaagccaaagccccgaaagtaggcgagtttaacatttctcataacgtcgatgtg
cccaaggccttgggtgatgttctggaggcacttatagccgccgtttacctagactgccgc
gacttaaacaccacctggcaagtggtctacagactgtttgagcccgaactactggaattc
tcgcgtaatgtgccactcaatccgatccgtcagctctttgagcacaagctggcaaagccc
acctttagctcgcctgtcatggacaataaccaagtgatggtcacctgtcaattcatctgc
atggagaagaccatcaaggtctatggctttggtaataacggaaagcaggccaagttgtca
gctgcaaaacatgctctccaaaaactggccaagtgcgaagcatag
DBGET
integrated database retrieval system