Drosophila navojoa: 108653523
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Entry
108653523 CDS
T05898
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
dnv
Drosophila navojoa
Pathway
dnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108653523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108653523
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108653523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_1
TPR_8
TPR_14
TPR_19
TPR_12
TPR_9
TPR_6
TPR_17
TPR_CcmH_CycH
TPR_7
TPR_11
LETM1_RBD
ARM_TT21_C
RNPP_C
TPR_Slam
ChAPs
TPR_10
Motif
Other DBs
NCBI-GeneID:
108653523
NCBI-ProteinID:
XP_017959591
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MISTMSTKESKALIKDIRETIKMAKYGDAIHKCQRLLRGDPKNYMGYLLLGAAYQNIDKV
EAAKFLRKSIEYTEGPATVALQGLANCAPAEELPQVYEQLIDLVPEKCLEYYDKLYALAA
NAALTKSCLDVFKKKAQNPNDSHINKILEYLGRIWFSSDLEVPAAETELYKMSMEKLLSV
GDADLQSLVYKRYLKFLYKHQDYVSCMRHACNMTESHPRDVYGYEWICMMHCENHEKVHN
KAWQSELRRSVPEYAAQLLQLNPKSNLALLVQALELYSKEQFVAARQLALQALEYQPSYR
MTQQLLARIHMKLGAHKLALLLWQELGEQHEEYAQCLSYETDVKLLEEASKLLKDKAATD
ELNLKALARCYYKLGEVEKLKSLPLDAVTHAEFLLPPSEALEALADNESFEALLLRGKLN
MKLRNFAEALNCMLKATRLQPHIAECFEHLGQLYQANDDIIRARKCFEKCVSLNALAQEA
VDALSSIYQQLGEEDLNEALLLNTLRHLSNDDAIRLQYKLGLHFLKVKKLDNAIQCFRLA
IKHDYKCMIYWESLGDAYAARGSYNSAIRVFQKILELSPNNSYAQLQIAVIKTTIRMYPE
AIADFDELLKKYPDYLPALRGAAEAHIGLAHNLRSQNLYGRAKDNFKMALEHLQSAFLQS
KAQCMVWLWRLTASVLVQTAQLPQSLANLDVTGNLVKREEKIVHLSRKDLLQLAQRFYLC
ALKLKQNTFLWYELALCSYFSAVYMPEDANSHLEIAAKVCKMAIKAQSNRWQNWNLLGVI
NMHTANENFPVAQHCLIQAVVTERKSYTAWTNLGVLYIKLGDIRLANEAFKRAQQSSPIY
PNAWIGQALVAEIMGEQEEAFDLFRHCQQFEYHPEAAIGYAHWVCHVLSNPALRDKPQNK
HAIEHMHADINALDAINWFVQNEESEACIASLTFQGFLFARQKLYKQAINAFTCACQQAP
PGTDRDNLYTNLGYLYLKLGQPEHAVSAFDNVAHASFKPISGLALAYYRCGQSHESYATY
SNLLASGVAQDEEKAATILVAMASLVYASQGDTDTKTLLYQCILLKNAPIQAFFSAFALG
VLHRDNDLIKIIMPDLQKYRFHEKYSADVSYLTANYCLINEGSRQALNYLQQRVRMFPQN
PALRKIFVKFLLDYFPNDLTYEKALANMALIALKLGPSYLSDCNNASEISETTIYACRAL
ERVDRTRSLKLIQSAIRMDPINQHARQLLSSITACQPLNI
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgatatccacaatgagtaccaaggaatcaaaagccctaatcaaggacatacgggaaaca
ataaaaatggccaaatatggagacgccatacataaatgccaacgtctactcaggggtgat
ccaaaaaattatatgggctacttgttgctcggcgctgcctaccagaatattgacaaagta
gaagcggccaaatttctccggaagtccattgagtataccgagggacccgccacagtcgcg
ttgcaaggactggcgaattgtgcacctgcagaggagctgccacaagtttacgagcagctc
attgacctagtgccagagaaatgcttggaatactatgataagctctatgccttggcggca
aatgctgccttgactaaatcgtgcttggacgttttcaagaagaaggcacagaatccgaat
gatagccatattaataagatcctggagtatttgggcagaatatggttttccagcgatctg
gaggtgccagccgcagaaacggaactctacaaaatgagcatggaaaaacttttgtcggtg
ggcgatgccgatctacagagcttggtctacaagcgttatctgaagttcctctacaaacac
caggactatgttagctgcatgcggcacgcttgcaatatgactgaatcacatccacgcgat
gtctatggctatgaatggatctgtatgatgcactgcgagaatcacgagaaggtgcataat
aaggcttggcaaagcgagctgcgtcgctctgttccagaatatgccgcacagctgctgcaa
ctcaatcccaaatcaaatttagcgctacttgttcaggcattagaattgtattcaaaagag
cagttcgttgcggctagacaattggctttgcaagctctggaataccaaccaagctataga
atgactcaacagcttctggctaggattcacatgaaattgggtgctcacaaattagcactt
ttgctgtggcaggagttgggcgagcagcatgaagagtatgctcaatgtttgtcctatgaa
acggatgtcaaactattggaagaggcgtctaaactgctgaaggataaagcagcaacagat
gaacttaacttaaaggcactggcgcggtgctattataagctgggtgaagtggaaaagttg
aagtccttaccattagatgcagttacacacgctgaatttctactgcctccttcggaagcg
cttgaagccctagccgacaatgaatcattcgaagcgctgttgctgcgaggcaagctgaat
atgaagctgcggaatttcgccgaggcgctgaactgcatgctgaaggctacacgactacag
ccacacattgctgaatgcttcgagcacttggggcagttgtatcaagcgaatgatgatatt
atacgagcgcgcaaatgttttgagaagtgcgttagtttgaatgctttggcccaagaggct
gtggatgccttaagctcaatctatcagcagttgggcgaagaggatctgaatgaagcgctg
ttgcttaataccttgcgccacctgagcaacgacgatgccattcgcttgcagtacaaactg
ggattgcactttttgaaagtgaaaaaactggataatgctattcaatgctttcgtcttgct
attaagcacgactataaatgcatgatctattgggagtccctgggcgatgcatatgcagca
cgcggctcgtacaactcagcgattcgtgtctttcaaaaaattctcgagctatcgcccaac
aacagttacgctcaattgcaaatagctgtgattaaaacgacgattcgcatgtatccagaa
gcaattgctgactttgatgagctactcaaaaagtacccagattatttgcctgctttgaga
ggcgctgcagaggcacatataggacttgcccataatctaaggagtcaaaatctgtatgga
cgtgccaaggataacttcaaaatggctttggagcatctgcagagcgccttcttgcaaagc
aaggctcagtgcatggtttggctttggcgactcactgcgagtgttttggtgcaaacagct
cagttacctcaatccttggccaatttggatgtgacgggcaatttggtaaagcgagaggag
aaaattgtgcatctatcgcgcaaagatctactgcaactggcgcaaagattttacttgtgc
gccttgaagcttaagcaaaacacattcttgtggtatgagttggccttatgcagctacttt
agtgccgtctatatgccagaggatgcgaatagtcatctggagatagcggccaaggtgtgc
aagatggccatcaaggcacagagcaatcgctggcagaactggaatctgttgggtgtgatc
aatatgcatacagccaatgagaattttcctgtggcccagcattgtttaatccaagccgtt
gtgactgagaggaaatcctatacagcttggacaaatctcggcgtattatatatcaagctg
ggcgatataagattagctaacgaggcctttaagcgtgcccagcaatcgagtccgatttat
ccgaatgcttggataggacaggctttggtagccgaaataatgggcgagcaggaggaggct
ttcgatttatttcggcattgccagcagttcgaatatcatccagaagcagctattggttat
gcccattgggtttgccatgtgctctccaatccggctctgcgcgataagccgcagaacaaa
catgcaatagagcatatgcatgcggatataaatgccctggatgccatcaactggtttgtt
cagaatgaggagtcggaggcctgcattgcgtcgcttacatttcagggttttctttttgca
cgccaaaagctttacaaacaggcaattaatgcatttacttgtgcctgccagcaagcgccg
cccggcacagatcgagataatctttatacgaatctagggtatctttacttgaagctcggc
cagccggagcatgcagtcagcgcctttgacaatgtagcccatgcttcctttaagcccatt
tctggcttggctttggcctattatcgctgtggtcagtctcatgaatcgtatgcaacatac
tccaacctattggccagcggcgtggcgcaggatgaggaaaaggcagcaactatattggta
gcaatggcctctctagtatatgcctctcaaggcgatacggataccaaaacactgctttat
caatgcatacttctcaaaaatgcgcccattcaagccttcttctcggcttttgctttgggc
gtgctgcatcgggataatgatctgatcaagatcatcatgccagacctacaaaagtatcga
tttcatgagaagtattcggctgatgtgtcctacttaactgctaattactgtttaataaat
gagggctctcgtcaggctttaaactatcttcaacaacgtgtgcgtatgtttcctcaaaat
cctgcgctgcgcaaaatttttgtcaagtttctactggactatttcccgaacgatctgact
tatgaaaaggccttagctaatatggctttgattgcgcttaaattggggcccagctacttg
agtgactgcaacaatgccagtgagatatcagagacaaccatctatgcctgccgagctctg
gaacgtgtagataggactcggtccctaaagcttattcaaagcgccatacgcatggatcca
atcaatcagcatgccaggcagctgctaagcagtataactgcgtgccagcctttaaatatt
taa
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